Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:27:47 (2718645): wrapper (7.7.26015): starting
21:27:47 (2718645): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 21:27:47] Arguments: --nthreads 9
[2025-11-27 21:27:47] Threads: 9
[2025-11-27 21:27:47] Checking for CVMFS
[2025-11-27 21:27:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 21:27:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 21:27:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 21:27:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 21:27:50] 2.13.3.0 9582 32307 267288 153393 3 571 21564282 40960001 56636 16776704 0 417546445 99.728 285590748 48330 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 21:27:50] CVMFS is ok
[2025-11-27 21:27:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 21:27:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 21:27:50] Further information can be found at the LHC@home message board.
[2025-11-27 21:27:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 21:27:50] Checking for apptainer binary...
[2025-11-27 21:27:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 21:27:50] Running /usr/bin/apptainer --version
[2025-11-27 21:27:50] apptainer version 1.4.4-1.el9
[2025-11-27 21:27:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 21:27:50] c8-7-4.aglt2.org
[2025-11-27 21:27:50] apptainer works
[2025-11-27 21:27:50] Set ATHENA_PROC_NUMBER=9
[2025-11-27 21:27:50] Set ATHENA_CORE_NUMBER=9
[2025-11-27 21:27:51] Starting ATLAS job with PandaID=6897663407
[2025-11-27 21:27:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 10:58:47]  *** The last 200 lines of the pilot log: ***
[2025-11-28 10:58:47] 2025-11-28 15:57:34,672 | INFO     | time since job start (48477s) is within the limit (172800.0s)
[2025-11-28 10:58:47] 2025-11-28 15:57:36,605 | INFO     | monitor loop #2408: job 0:6897663407 is in state 'finished'
[2025-11-28 10:58:47] 2025-11-28 15:57:36,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 10:58:47] 2025-11-28 15:57:36,689 | INFO     | time since job start (48479s) is within the limit (172800.0s)
[2025-11-28 10:58:47] 2025-11-28 15:57:38,700 | INFO     | time since job start (48481s) is within the limit (172800.0s)
[2025-11-28 10:58:47] 2025-11-28 15:57:39,110 | INFO     | monitor loop #2409: job 0:6897663407 is in state 'finished'
[2025-11-28 10:58:47] 2025-11-28 15:57:39,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 10:58:47] 2025-11-28 15:57:40,711 | INFO     | time since job start (48483s) is within the limit (172800.0s)
[2025-11-28 10:58:47] 2025-11-28 15:57:41,626 | INFO     | monitor loop #2410: job 0:6897663407 is in state 'finished'
[2025-11-28 10:58:47] 2025-11-28 15:57:41,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 10:58:47] 2025-11-28 15:57:42,717 | INFO     | time since job start (48485s) is within the limit (172800.0s)
[2025-11-28 10:58:47] 2025-11-28 15:57:44,132 | INFO     | monitor loop #2411: job 0:6897663407 is in state 'finished'
[2025-11-28 10:58:47] 2025-11-28 15:57:44,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 10:58:47] 2025-11-28 15:57:44,724 | INFO     | time since job start (48487s) is within the limit (172800.0s)
[2025-11-28 10:58:47] 2025-11-28 15:57:46,652 | INFO     | monitor loop #2412: job 0:6897663407 is in state 'finished'
[2025-11-28 10:58:47] 2025-11-28 15:57:46,653 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 10:58:47] 2025-11-28 15:57:46,730 | INFO     | time since job start (48489s) is within the limit (172800.0s)
[2025-11-28 10:58:47] 2025-11-28 15:57:47,390 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 10:58:47] 2025-11-28 15:57:47,399 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9944453125013
[2025-11-28 10:58:47] 2025-11-28 15:57:47,474 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6897663407/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 10:58:47] 2025-11-28 15:57:47,475 | INFO     | extracted standard info from prmon json
[2025-11-28 10:58:47] 2025-11-28 15:57:47,475 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 10:58:47] 2025-11-28 15:57:47,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 10:58:47] 2025-11-28 15:57:47,487 | INFO     | fitting pss+swap vs Time
[2025-11-28 10:58:47] 2025-11-28 15:57:47,488 | INFO     | sum of square deviations: 153466695686.4956
[2025-11-28 10:58:47] 2025-11-28 15:57:47,545 | INFO     | sum of deviations: 390523373628.4957
[2025-11-28 10:58:47] 2025-11-28 15:57:47,545 | INFO     | mean x: 1764321298.460177
[2025-11-28 10:58:47] 2025-11-28 15:57:47,546 | INFO     | mean y: 2918034.0316055627
[2025-11-28 10:58:47] 2025-11-28 15:57:47,546 | INFO     | intersect: -4486712126.813163
[2025-11-28 10:58:47] 2025-11-28 15:57:47,546 | INFO     | chi2: 34.66591535704525
[2025-11-28 10:58:47] 2025-11-28 15:57:47,561 | INFO     | sum of square deviations: 150575448918.5409
[2025-11-28 10:58:47] 2025-11-28 15:57:47,568 | INFO     | sum of deviations: 670392649614.0852
[2025-11-28 10:58:47] 2025-11-28 15:57:47,568 | INFO     | mean x: 1764321145.975827
[2025-11-28 10:58:47] 2025-11-28 15:57:47,568 | INFO     | mean y: 2932787.7938931296
[2025-11-28 10:58:47] 2025-11-28 15:57:47,568 | INFO     | intersect: -7852185269.737284
[2025-11-28 10:58:47] 2025-11-28 15:57:47,569 | INFO     | chi2: 30.837236984843287
[2025-11-28 10:58:47] 2025-11-28 15:57:47,569 | INFO     | current chi2=30.837236984843287 (change=11.044503896026074 %)
[2025-11-28 10:58:47] 2025-11-28 15:57:47,569 | INFO     | right removable region: 785
[2025-11-28 10:58:47] 2025-11-28 15:57:47,569 | INFO     | sum of square deviations: 150574261858.5408
[2025-11-28 10:58:47] 2025-11-28 15:57:47,577 | INFO     | sum of deviations: 42650762646.66462
[2025-11-28 10:58:47] 2025-11-28 15:57:47,577 | INFO     | mean x: 1764321450.975827
[2025-11-28 10:58:47] 2025-11-28 15:57:47,577 | INFO     | mean y: 2936376.403307888
[2025-11-28 10:58:47] 2025-11-28 15:57:47,577 | INFO     | intersect: -496814739.81789136
[2025-11-28 10:58:47] 2025-11-28 15:57:47,577 | INFO     | chi2: 29.769013328482362
[2025-11-28 10:58:47] 2025-11-28 15:57:47,577 | INFO     | current chi2=29.769013328482362 (change=14.12598507244574 %)
[2025-11-28 10:58:47] 2025-11-28 15:57:47,577 | INFO     | left removable region: 10
[2025-11-28 10:58:47] 2025-11-28 15:57:47,578 | INFO     | sum of square deviations: 144340691523.65665
[2025-11-28 10:58:47] 2025-11-28 15:57:47,585 | INFO     | sum of deviations: 62162959364.612885
[2025-11-28 10:58:47] 2025-11-28 15:57:47,585 | INFO     | mean x: 1764321420.5109677
[2025-11-28 10:58:47] 2025-11-28 15:57:47,585 | INFO     | mean y: 2970815.5161290322
[2025-11-28 10:58:47] 2025-11-28 15:57:47,585 | INFO     | intersect: -756866480.617125
[2025-11-28 10:58:47] 2025-11-28 15:57:47,585 | INFO     | chi2: 21.492372903463426
[2025-11-28 10:58:47] 2025-11-28 15:57:47,585 | INFO     | current memory leak: 0.43 B/s (using 775 data points, chi2=21.49)
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | could have reported an average CPU frequency of 3799 MHz (30 samples)
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | ..............................
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | . Timing measurements:
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | . get job = 0 s
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | . initial setup = 4 s
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | . payload setup = 67 s
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | . stage-in = 0 s
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | . payload execution = 48258 s
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | . stage-out = 8 s
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | . log creation = 2 s
[2025-11-28 10:58:47] 2025-11-28 15:57:47,586 | INFO     | ..............................
[2025-11-28 10:58:47] 2025-11-28 15:57:47,929 | INFO     | 
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | job summary report
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | --------------------------------------------------
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | PanDA job id: 6897663407
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | task id: 47556161
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | errors: (none)
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | pilot state: finished 
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | transexitcode: 0
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | exeerrorcode: 0
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | exeerrordiag: 
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | exitcode: 0
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | exitmsg: OK
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | cpuconsumptiontime: 135619 s
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | nevents: 1000
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | neventsw: 0
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | pid: 2815625
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | pgrp: 2815625
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | corecount: 9
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | event service: False
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | sizes: {0: 2284265, 11: 2284265, 22: 2284293, 32: 2284321, 43: 2284349, 44: 2284639, 54: 2284795, 48330: 2331052, 48339: 2340102, 48385: 2340292}
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | --------------------------------------------------
[2025-11-28 10:58:47] 2025-11-28 15:57:47,930 | INFO     | 
[2025-11-28 10:58:47] 2025-11-28 15:57:47,931 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,058 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 10:58:47] 2025-11-28 15:57:48,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 10:58:47] 2025-11-28 15:57:48,058 | INFO     | job 6897663407 has completed (purged errors)
[2025-11-28 10:58:47] 2025-11-28 15:57:48,058 | INFO     | overall cleanup function is called
[2025-11-28 10:58:47] 2025-11-28 15:57:49,120 | INFO     | --- collectZombieJob: --- 10, [2815625]
[2025-11-28 10:58:47] 2025-11-28 15:57:49,121 | INFO     | zombie collector waiting for pid 2815625
[2025-11-28 10:58:47] 2025-11-28 15:57:49,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 10:58:47] 2025-11-28 15:57:49,121 | INFO     | collected zombie processes
[2025-11-28 10:58:47] 2025-11-28 15:57:49,121 | INFO     | will attempt to kill all subprocesses of pid=2815625
[2025-11-28 10:58:47] 2025-11-28 15:57:53,090 | INFO     | process IDs to be killed: [2815625] (in reverse order)
[2025-11-28 10:58:47] 2025-11-28 15:57:53,748 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 10:58:47] 2025-11-28 15:57:53,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 10:58:47] 2025-11-28 15:57:53,868 | INFO     | did not find any defunct processes belonging to 2815625
[2025-11-28 10:58:47] 2025-11-28 15:57:54,125 | INFO     | did not find any defunct processes belonging to 2815625
[2025-11-28 10:58:47] 2025-11-28 15:57:54,187 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 10:58:47] 2025-11-28 15:57:54,188 | INFO     | ready for new job
[2025-11-28 10:58:47] 2025-11-28 15:57:54,188 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 10:58:47] 2025-11-28 15:57:54,191 | INFO     | ***************************************
[2025-11-28 10:58:47] 2025-11-28 15:57:54,191 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 10:58:47] 2025-11-28 15:57:54,191 | INFO     | ***************************************
[2025-11-28 10:58:47] 2025-11-28 15:57:54,191 | INFO     | 
[2025-11-28 10:58:47] 2025-11-28 15:57:54,221 | INFO     | architecture information:
[2025-11-28 10:58:47] 2025-11-28 15:57:54,232 | INFO     | executing command: cat /etc/os-release
[2025-11-28 10:58:47] 2025-11-28 15:57:54,312 | INFO     | cat /etc/os-release:
[2025-11-28 10:58:47] NAME="CentOS Linux"
[2025-11-28 10:58:47] VERSION="7 (Core)"
[2025-11-28 10:58:47] ID="centos"
[2025-11-28 10:58:47] ID_LIKE="rhel fedora"
[2025-11-28 10:58:47] VERSION_ID="7"
[2025-11-28 10:58:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 10:58:47] ANSI_COLOR="0;31"
[2025-11-28 10:58:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 10:58:47] HOME_URL="https://www.centos.org/"
[2025-11-28 10:58:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 10:58:47] 
[2025-11-28 10:58:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 10:58:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 10:58:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 10:58:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 10:58:47] 
[2025-11-28 10:58:47] 2025-11-28 15:57:54,312 | INFO     | ***************************************
[2025-11-28 10:58:47] 2025-11-28 15:57:54,815 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-28 10:58:47] 2025-11-28 15:57:55,003 | INFO     | sufficient remaining disk space (160253870080 B)
[2025-11-28 10:58:47] 2025-11-28 15:57:55,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 10:58:47] 2025-11-28 15:57:55,004 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 10:58:47] 2025-11-28 15:57:55,004 | INFO     | update_server=False
[2025-11-28 10:58:47] 2025-11-28 15:57:55,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 10:58:47] 2025-11-28 15:57:55,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 10:58:47] 2025-11-28 15:57:55,372 | INFO     | aborting loop
[2025-11-28 10:58:47] 2025-11-28 15:57:55,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 10:58:47] 2025-11-28 15:57:55,877 | INFO     | all payload control threads have been joined
[2025-11-28 10:58:47] 2025-11-28 15:57:55,986 | INFO     | all data control threads have been joined
[2025-11-28 10:58:47] 2025-11-28 15:57:56,010 | INFO     | [job] retrieve thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,016 | INFO     | [payload] failed_post thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,203 | INFO     | [payload] validate_post thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,377 | INFO     | [job] job monitor thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,423 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,434 | INFO     | [data] copytool_in thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,499 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,527 | INFO     | all job control threads have been joined
[2025-11-28 10:58:47] 2025-11-28 15:57:56,595 | INFO     | [job] validate thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,883 | INFO     | [payload] control thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:56,992 | INFO     | [data] control thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:57,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 10:58:47] 2025-11-28 15:57:57,455 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:57,533 | INFO     | [job] control thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:57,582 | INFO     | [data] copytool_out thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:58,036 | INFO     | [job] queue monitor thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:57:58,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 10:58:47] 2025-11-28 15:58:02,337 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 10:58:47] 2025-11-28 15:58:06,440 | INFO     | [monitor] cgroup control has ended
[2025-11-28 10:58:47] 2025-11-28 15:58:07,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336940336960)>', '<ExcThread(monitor, started 140336668055296)>']
[2025-11-28 10:58:47] 2025-11-28 15:58:12,853 | INFO     | all workflow threads have been joined
[2025-11-28 10:58:47] 2025-11-28 15:58:12,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 10:58:47] 2025-11-28 15:58:12,854 | INFO     | traces error code: 0
[2025-11-28 10:58:47] 2025-11-28 15:58:12,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 10:58:47] 2025-11-28 15:58:22,971 | INFO     | PID=2748380 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 10:58:47] 2025-11-28 15:58:22,971 | INFO     | .. there are 114 such processes running
[2025-11-28 10:58:47] 2025-11-28 15:58:22,973 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 10:58:47] 2025-11-28 15:58:22,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 10:58:47] 2025-11-28 15:58:22,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 10:58:47] 2025-11-28 15:58:22,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 10:58:47] 2025-11-28 15:58:22,974 | INFO     | [monitor] control thread has ended
[2025-11-28 10:58:47] 2025-11-28 15:58:23,877 [wrapper] ==== pilot stdout END ====
[2025-11-28 10:58:47] 2025-11-28 15:58:23,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 10:58:47] 2025-11-28 15:58:24,000 [wrapper] pilotpid: 2748380
[2025-11-28 10:58:47] 2025-11-28 15:58:24,021 [wrapper] Pilot exit status: 0
[2025-11-28 10:58:47] 2025-11-28 15:58:24,092 [wrapper] pandaids: 6897663407
[2025-11-28 10:58:47] 2025-11-28 15:58:26,218 [wrapper] cleanup supervisor_pilot 1285076 2748381
[2025-11-28 10:58:47] 2025-11-28 15:58:26,242 [wrapper] Test setup, not cleaning
[2025-11-28 10:58:47] 2025-11-28 15:58:26,266 [wrapper] apfmon messages muted
[2025-11-28 10:58:47] 2025-11-28 15:58:26,290 [wrapper] ==== wrapper stdout END ====
[2025-11-28 10:58:47] 2025-11-28 15:58:26,315 [wrapper] ==== wrapper stderr END ====
[2025-11-28 10:58:47]  *** Error codes and diagnostics ***
[2025-11-28 10:58:47]     "exeErrorCode": 0,
[2025-11-28 10:58:47]     "exeErrorDiag": "",
[2025-11-28 10:58:47]     "pilotErrorCode": 0,
[2025-11-28 10:58:47]     "pilotErrorDiag": "",
[2025-11-28 10:58:47]  *** Listing of results directory ***
[2025-11-28 10:58:47] total 1315728
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-28 10:58:47] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas       100 Nov 27 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 10:58:47] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 21:27 run_atlas
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas       105 Nov 27 21:27 job.xml
[2025-11-28 10:58:47] -rw-r--r--. 2 boincer umatlas 412349293 Nov 27 21:27 EVNT.47483658._002318.pool.root.1
[2025-11-28 10:58:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 21:27 start_atlas.sh
[2025-11-28 10:58:47] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 21:27 shared
[2025-11-28 10:58:47] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 21:27 input.tar.gz
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas         0 Nov 27 21:27 boinc_lockfile
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 21:27 pandaJob.out
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas        57 Nov 27 21:27 setup.sh.local
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas    991842 Nov 27 21:29 agis_schedconf.cvmfs.json
[2025-11-28 10:58:47] drwx------. 5 boincer umatlas      4096 Nov 27 21:29 pilot3
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas       533 Nov 28 10:19 boinc_task_state.xml
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas      7173 Nov 28 10:54 init_data.xml
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas 916043848 Nov 28 10:55 HITS.47556161._003017.pool.root.1
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas      1050 Nov 28 10:56 memory_monitor_summary.json
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas   1516240 Nov 28 10:56 agis_ddmendpoints.agis.ALL.json
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas   2033992 Nov 28 10:57 log.47556161._003017.job.log.tgz.1
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas      8594 Nov 28 10:57 heartbeat.json
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas        95 Nov 28 10:58 pilot_heartbeat.json
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas       824 Nov 28 10:58 pilotlog.txt
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas   5463562 Nov 28 10:58 log.47556161._003017.job.log.1
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas       353 Nov 28 10:58 output.list
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas       620 Nov 28 10:58 runtime_log
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas   7516160 Nov 28 10:58 result.tar.gz
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas       657 Nov 28 10:58 uPeLDmXbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRiJKDmnAl7Fm.diag
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas      9333 Nov 28 10:58 runtime_log.err
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 10:58 boinc_mmap_file
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas        29 Nov 28 10:58 wrapper_checkpoint.txt
[2025-11-28 10:58:47] -rw-r--r--. 1 boincer umatlas     21797 Nov 28 10:58 stderr.txt
[2025-11-28 10:58:47] HITS file was successfully produced:
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas 916043848 Nov 28 10:55 shared/HITS.pool.root.1
[2025-11-28 10:58:47]  *** Contents of shared directory: ***
[2025-11-28 10:58:47] total 1305208
[2025-11-28 10:58:47] -rw-r--r--. 2 boincer umatlas 412349293 Nov 27 21:27 ATLAS.root_0
[2025-11-28 10:58:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 21:27 start_atlas.sh
[2025-11-28 10:58:47] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 21:27 input.tar.gz
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas 916043848 Nov 28 10:55 HITS.pool.root.1
[2025-11-28 10:58:47] -rw-------. 1 boincer umatlas   7516160 Nov 28 10:58 result.tar.gz
10:58:49 (2718645): run_atlas exited; CPU time 136506.426797
10:58:49 (2718645): called boinc_finish(0)

</stderr_txt>
]]>

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