Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:46:06 (7943): wrapper (7.7.26015): starting
20:46:06 (7943): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 20:46:06] Arguments: --nthreads 8
[2025-11-27 20:46:06] Threads: 8
[2025-11-27 20:46:06] Checking for CVMFS
[2025-11-27 20:46:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 20:46:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 20:46:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 20:46:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 20:46:06] 2.11.2.0 2873 62637 90588 153392 2 82 11660932 20275200 1 130560 0 16099091 99.844 3650250 31196 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 20:46:06] CVMFS is ok
[2025-11-27 20:46:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 20:46:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 20:46:06] Further information can be found at the LHC@home message board.
[2025-11-27 20:46:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 20:46:06] Checking for apptainer binary...
[2025-11-27 20:46:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 20:46:06] Running /usr/bin/apptainer --version
[2025-11-27 20:46:07] apptainer version 1.3.2-1.el7
[2025-11-27 20:46:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 20:46:08] c-115-13.aglt2.org
[2025-11-27 20:46:08] apptainer works
[2025-11-27 20:46:08] Set ATHENA_PROC_NUMBER=8
[2025-11-27 20:46:08] Set ATHENA_CORE_NUMBER=8
[2025-11-27 20:46:08] Starting ATLAS job with PandaID=6899449132
[2025-11-27 20:46:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 08:01:39]  *** The last 200 lines of the pilot log: ***
[2025-11-28 08:01:39] 2025-11-28 13:00:56,769 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 08:01:39] 2025-11-28 13:00:56,772 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1795.625
[2025-11-28 08:01:39] 2025-11-28 13:00:56,774 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6899449132/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 08:01:39] 2025-11-28 13:00:56,775 | INFO     | extracted standard info from prmon json
[2025-11-28 08:01:39] 2025-11-28 13:00:56,775 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 08:01:39] 2025-11-28 13:00:56,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 08:01:39] 2025-11-28 13:00:56,787 | INFO     | fitting pss+swap vs Time
[2025-11-28 08:01:39] 2025-11-28 13:00:56,788 | INFO     | sum of square deviations: 90368887036.9801
[2025-11-28 08:01:39] 2025-11-28 13:00:56,797 | INFO     | sum of deviations: 704135817341.3337
[2025-11-28 08:01:39] 2025-11-28 13:00:56,797 | INFO     | mean x: 1764314607.627451
[2025-11-28 08:01:39] 2025-11-28 13:00:56,797 | INFO     | mean y: 3288254.717948718
[2025-11-28 08:01:39] 2025-11-28 13:00:56,797 | INFO     | intersect: -13743888998.672785
[2025-11-28 08:01:39] 2025-11-28 13:00:56,798 | INFO     | chi2: 5.676800644344288
[2025-11-28 08:01:39] 2025-11-28 13:00:56,799 | INFO     | sum of square deviations: 88339850287.49724
[2025-11-28 08:01:39] 2025-11-28 13:00:56,807 | INFO     | sum of deviations: 937043833019.6051
[2025-11-28 08:01:39] 2025-11-28 13:00:56,807 | INFO     | mean x: 1764314455.1322188
[2025-11-28 08:01:39] 2025-11-28 13:00:56,807 | INFO     | mean y: 3305749.188449848
[2025-11-28 08:01:39] 2025-11-28 13:00:56,808 | INFO     | intersect: -18711237849.29639
[2025-11-28 08:01:39] 2025-11-28 13:00:56,808 | INFO     | chi2: 2.9467154194893257
[2025-11-28 08:01:39] 2025-11-28 13:00:56,808 | INFO     | current chi2=2.9467154194893257 (change=48.0919693309101 %)
[2025-11-28 08:01:39] 2025-11-28 13:00:56,809 | INFO     | sum of square deviations: 86341378869.25563
[2025-11-28 08:01:39] 2025-11-28 13:00:56,817 | INFO     | sum of deviations: 1001977628156.2903
[2025-11-28 08:01:39] 2025-11-28 13:00:56,817 | INFO     | mean x: 1764314302.6355283
[2025-11-28 08:01:39] 2025-11-28 13:00:56,817 | INFO     | mean y: 3310687.8667687597
[2025-11-28 08:01:39] 2025-11-28 13:00:56,817 | INFO     | intersect: -20471269211.464027
[2025-11-28 08:01:39] 2025-11-28 13:00:56,818 | INFO     | chi2: 2.5516565586798645
[2025-11-28 08:01:39] 2025-11-28 13:00:56,818 | INFO     | current chi2=2.5516565586798645 (change=13.40675309860516 %)
[2025-11-28 08:01:39] 2025-11-28 13:00:56,818 | INFO     | right removable region: 652
[2025-11-28 08:01:39] 2025-11-28 13:00:56,819 | INFO     | sum of square deviations: 88339596527.49713
[2025-11-28 08:01:39] 2025-11-28 13:00:56,827 | INFO     | sum of deviations: 491200376800.44214
[2025-11-28 08:01:39] 2025-11-28 13:00:56,827 | INFO     | mean x: 1764314760.1322188
[2025-11-28 08:01:39] 2025-11-28 13:00:56,827 | INFO     | mean y: 3304226.512158055
[2025-11-28 08:01:39] 2025-11-28 13:00:56,828 | INFO     | intersect: -9806929338.475592
[2025-11-28 08:01:39] 2025-11-28 13:00:56,828 | INFO     | chi2: 3.2620456818180434
[2025-11-28 08:01:39] 2025-11-28 13:00:56,828 | INFO     | current chi2=3.2620456818180434 (change=42.53725141699364 %)
[2025-11-28 08:01:39] 2025-11-28 13:00:56,829 | INFO     | sum of square deviations: 86340991519.52545
[2025-11-28 08:01:39] 2025-11-28 13:00:56,837 | INFO     | sum of deviations: 450345274254.5265
[2025-11-28 08:01:39] 2025-11-28 13:00:56,837 | INFO     | mean x: 1764314912.633997
[2025-11-28 08:01:39] 2025-11-28 13:00:56,837 | INFO     | mean y: 3307341.3996937214
[2025-11-28 08:01:39] 2025-11-28 13:00:56,837 | INFO     | intersect: -9199168437.695637
[2025-11-28 08:01:39] 2025-11-28 13:00:56,838 | INFO     | chi2: 3.223508315006079
[2025-11-28 08:01:39] 2025-11-28 13:00:56,838 | INFO     | current chi2=3.223508315006079 (change=1.1813864847682483 %)
[2025-11-28 08:01:39] 2025-11-28 13:00:56,838 | INFO     | left removable region: 20
[2025-11-28 08:01:39] 2025-11-28 13:00:56,839 | INFO     | sum of square deviations: 78276228543.89706
[2025-11-28 08:01:39] 2025-11-28 13:00:56,847 | INFO     | sum of deviations: 702637782853.8151
[2025-11-28 08:01:39] 2025-11-28 13:00:56,847 | INFO     | mean x: 1764314882.1439874
[2025-11-28 08:01:39] 2025-11-28 13:00:56,847 | INFO     | mean y: 3333645.859177215
[2025-11-28 08:01:39] 2025-11-28 13:00:56,847 | INFO     | intersect: -15833840935.826704
[2025-11-28 08:01:39] 2025-11-28 13:00:56,848 | INFO     | chi2: 0.06702456860629627
[2025-11-28 08:01:39] 2025-11-28 13:00:56,848 | INFO     | current memory leak: 8.98 B/s (using 632 data points, chi2=0.07)
[2025-11-28 08:01:39] 2025-11-28 13:00:56,848 | INFO     | could have reported an average CPU frequency of 2342 MHz (26 samples)
[2025-11-28 08:01:39] 2025-11-28 13:00:56,848 | INFO     | ..............................
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | . Timing measurements:
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | . get job = 0 s
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | . initial setup = 2 s
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | . payload setup = 8 s
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | . stage-in = 0 s
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | . payload execution = 40430 s
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | . stage-out = 3 s
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | . log creation = 0 s
[2025-11-28 08:01:39] 2025-11-28 13:00:56,849 | INFO     | ..............................
[2025-11-28 08:01:39] 2025-11-28 13:00:57,143 | INFO     | time since job start (40472s) is within the limit (172800.0s)
[2025-11-28 08:01:39] 2025-11-28 13:00:57,184 | INFO     | 
[2025-11-28 08:01:39] 2025-11-28 13:00:57,184 | INFO     | job summary report
[2025-11-28 08:01:39] 2025-11-28 13:00:57,184 | INFO     | --------------------------------------------------
[2025-11-28 08:01:39] 2025-11-28 13:00:57,185 | INFO     | PanDA job id: 6899449132
[2025-11-28 08:01:39] 2025-11-28 13:00:57,185 | INFO     | task id: 47556173
[2025-11-28 08:01:39] 2025-11-28 13:00:57,185 | INFO     | errors: (none)
[2025-11-28 08:01:39] 2025-11-28 13:00:57,185 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 08:01:39] 2025-11-28 13:00:57,185 | INFO     | pilot state: finished 
[2025-11-28 08:01:39] 2025-11-28 13:00:57,185 | INFO     | transexitcode: 0
[2025-11-28 08:01:39] 2025-11-28 13:00:57,186 | INFO     | exeerrorcode: 0
[2025-11-28 08:01:39] 2025-11-28 13:00:57,186 | INFO     | exeerrordiag: 
[2025-11-28 08:01:39] 2025-11-28 13:00:57,186 | INFO     | exitcode: 0
[2025-11-28 08:01:39] 2025-11-28 13:00:57,186 | INFO     | exitmsg: OK
[2025-11-28 08:01:39] 2025-11-28 13:00:57,186 | INFO     | cpuconsumptiontime: 314387 s
[2025-11-28 08:01:39] 2025-11-28 13:00:57,187 | INFO     | nevents: 1000
[2025-11-28 08:01:39] 2025-11-28 13:00:57,187 | INFO     | neventsw: 0
[2025-11-28 08:01:39] 2025-11-28 13:00:57,187 | INFO     | pid: 18239
[2025-11-28 08:01:39] 2025-11-28 13:00:57,187 | INFO     | pgrp: 18239
[2025-11-28 08:01:39] 2025-11-28 13:00:57,187 | INFO     | corecount: 8
[2025-11-28 08:01:39] 2025-11-28 13:00:57,187 | INFO     | event service: False
[2025-11-28 08:01:39] 2025-11-28 13:00:57,188 | INFO     | sizes: {0: 2284316, 6: 2284578, 11: 2284606, 40443: 2328368, 40446: 2337362, 40448: 2337418, 40455: 2337792}
[2025-11-28 08:01:39] 2025-11-28 13:00:57,188 | INFO     | --------------------------------------------------
[2025-11-28 08:01:39] 2025-11-28 13:00:57,188 | INFO     | 
[2025-11-28 08:01:39] 2025-11-28 13:00:57,188 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 08:01:39] 2025-11-28 13:00:57,217 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,217 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 08:01:39] 2025-11-28 13:00:57,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,221 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 08:01:39] 2025-11-28 13:00:57,221 | INFO     | job 6899449132 has completed (purged errors)
[2025-11-28 08:01:39] 2025-11-28 13:00:57,221 | INFO     | overall cleanup function is called
[2025-11-28 08:01:39] 2025-11-28 13:00:58,237 | INFO     | --- collectZombieJob: --- 10, [18239]
[2025-11-28 08:01:39] 2025-11-28 13:00:58,238 | INFO     | zombie collector waiting for pid 18239
[2025-11-28 08:01:39] 2025-11-28 13:00:58,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 08:01:39] 2025-11-28 13:00:58,239 | INFO     | collected zombie processes
[2025-11-28 08:01:39] 2025-11-28 13:00:58,239 | INFO     | will attempt to kill all subprocesses of pid=18239
[2025-11-28 08:01:39] 2025-11-28 13:00:58,330 | INFO     | process IDs to be killed: [18239] (in reverse order)
[2025-11-28 08:01:39] 2025-11-28 13:00:58,387 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 08:01:39] 2025-11-28 13:00:58,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 08:01:39] 2025-11-28 13:00:58,392 | INFO     | did not find any defunct processes belonging to 18239
[2025-11-28 08:01:39] 2025-11-28 13:00:58,395 | INFO     | did not find any defunct processes belonging to 18239
[2025-11-28 08:01:39] 2025-11-28 13:00:58,398 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 08:01:39] 2025-11-28 13:00:58,398 | INFO     | ready for new job
[2025-11-28 08:01:39] 2025-11-28 13:00:58,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 08:01:39] 2025-11-28 13:00:58,402 | INFO     | ***************************************
[2025-11-28 08:01:39] 2025-11-28 13:00:58,402 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 08:01:39] 2025-11-28 13:00:58,402 | INFO     | ***************************************
[2025-11-28 08:01:39] 2025-11-28 13:00:58,402 | INFO     | 
[2025-11-28 08:01:39] 2025-11-28 13:00:58,403 | INFO     | architecture information:
[2025-11-28 08:01:39] 2025-11-28 13:00:58,404 | INFO     | executing command: cat /etc/os-release
[2025-11-28 08:01:39] 2025-11-28 13:00:58,421 | INFO     | cat /etc/os-release:
[2025-11-28 08:01:39] NAME="CentOS Linux"
[2025-11-28 08:01:39] VERSION="7 (Core)"
[2025-11-28 08:01:39] ID="centos"
[2025-11-28 08:01:39] ID_LIKE="rhel fedora"
[2025-11-28 08:01:39] VERSION_ID="7"
[2025-11-28 08:01:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 08:01:39] ANSI_COLOR="0;31"
[2025-11-28 08:01:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 08:01:39] HOME_URL="https://www.centos.org/"
[2025-11-28 08:01:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 08:01:39] 
[2025-11-28 08:01:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 08:01:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 08:01:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 08:01:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 08:01:39] 
[2025-11-28 08:01:39] 2025-11-28 13:00:58,421 | INFO     | ***************************************
[2025-11-28 08:01:39] 2025-11-28 13:00:58,925 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 08:01:39] 2025-11-28 13:00:58,944 | INFO     | sufficient remaining disk space (17456693248 B)
[2025-11-28 08:01:39] 2025-11-28 13:00:58,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 08:01:39] 2025-11-28 13:00:58,945 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 08:01:39] 2025-11-28 13:00:58,945 | INFO     | update_server=False
[2025-11-28 08:01:39] 2025-11-28 13:00:58,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 08:01:39] 2025-11-28 13:00:58,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 08:01:39] 2025-11-28 13:00:58,946 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-28 08:01:39] 2025-11-28 13:00:58,947 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 08:01:39] 2025-11-28 13:00:58,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 08:01:39] 2025-11-28 13:00:58,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 08:01:39] 2025-11-28 13:00:58,978 | INFO     | all data control threads have been joined
[2025-11-28 08:01:39] 2025-11-28 13:00:59,009 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 08:01:39] 2025-11-28 13:00:59,009 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 08:01:39] 2025-11-28 13:00:59,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:01:39] 2025-11-28 13:00:59,010 | INFO     | will abort loop
[2025-11-28 08:01:39] 2025-11-28 13:00:59,489 | INFO     | all payload control threads have been joined
[2025-11-28 08:01:39] 2025-11-28 13:00:59,754 | INFO     | all job control threads have been joined
[2025-11-28 08:01:39] 2025-11-28 13:00:59,952 | INFO     | [job] retrieve thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:00:59,984 | INFO     | [data] control thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:00:59,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,015 | INFO     | [job] job monitor thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,096 | INFO     | [payload] validate_post thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,315 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,316 | INFO     | [data] copytool_in thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,495 | INFO     | [payload] control thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,596 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,619 | INFO     | [payload] failed_post thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,760 | INFO     | [job] control thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:00,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 08:01:39] 2025-11-28 13:01:00,952 | INFO     | [data] copytool_out thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:01,081 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:01,142 | INFO     | [job] validate thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:01,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:01:39] 2025-11-28 13:01:02,943 | INFO     | [job] queue monitor thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:04,856 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 08:01:39] 2025-11-28 13:01:29,751 [wrapper] supervise_pilot (15 min periods counter: 46)
[2025-11-28 08:01:39] 2025-11-28 13:01:31,901 | INFO     | [monitor] cgroup control has ended
[2025-11-28 08:01:39] 2025-11-28 13:01:34,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431671895872)>', '<ExcThread(monitor, started 140430851168000)>']
[2025-11-28 08:01:39] 2025-11-28 13:01:34,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 08:01:39] 2025-11-28 13:01:34,110 | INFO     | [monitor] control thread has ended
[2025-11-28 08:01:39] 2025-11-28 13:01:39,022 | INFO     | all workflow threads have been joined
[2025-11-28 08:01:39] 2025-11-28 13:01:39,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 08:01:39] 2025-11-28 13:01:39,023 | INFO     | traces error code: 0
[2025-11-28 08:01:39] 2025-11-28 13:01:39,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 08:01:39] 2025-11-28 13:01:39,145 [wrapper] ==== pilot stdout END ====
[2025-11-28 08:01:39] 2025-11-28 13:01:39,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 08:01:39] 2025-11-28 13:01:39,154 [wrapper] pilotpid: 11652
[2025-11-28 08:01:39] 2025-11-28 13:01:39,158 [wrapper] Pilot exit status: 0
[2025-11-28 08:01:39] 2025-11-28 13:01:39,176 [wrapper] pandaids: 6899449132
[2025-11-28 08:01:39] 2025-11-28 13:01:39,223 [wrapper] cleanup supervisor_pilot 22322 11653
[2025-11-28 08:01:39] 2025-11-28 13:01:39,228 [wrapper] Test setup, not cleaning
[2025-11-28 08:01:39] 2025-11-28 13:01:39,232 [wrapper] apfmon messages muted
[2025-11-28 08:01:39] 2025-11-28 13:01:39,237 [wrapper] ==== wrapper stdout END ====
[2025-11-28 08:01:39] 2025-11-28 13:01:39,242 [wrapper] ==== wrapper stderr END ====
[2025-11-28 08:01:39]  *** Error codes and diagnostics ***
[2025-11-28 08:01:39]     "exeErrorCode": 0,
[2025-11-28 08:01:39]     "exeErrorDiag": "",
[2025-11-28 08:01:39]     "pilotErrorCode": 0,
[2025-11-28 08:01:39]     "pilotErrorDiag": "",
[2025-11-28 08:01:39]  *** Listing of results directory ***
[2025-11-28 08:01:39] total 1323420
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-11-28 08:01:39] -rwx------ 1 boincer umatlas     36292 Nov 27 03:49 runpilot2-wrapper.sh
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 03:52 queuedata.json
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas       100 Nov 27 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 08:01:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 20:46 run_atlas
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas       105 Nov 27 20:46 job.xml
[2025-11-28 08:01:39] -rw-r--r-- 2 boincer umatlas 412329932 Nov 27 20:46 EVNT.47483658._003310.pool.root.1
[2025-11-28 08:01:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 20:46 start_atlas.sh
[2025-11-28 08:01:39] drwxrwx--x 2 boincer umatlas      4096 Nov 27 20:46 shared
[2025-11-28 08:01:39] -rw-r--r-- 2 boincer umatlas    590111 Nov 27 20:46 input.tar.gz
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas         0 Nov 27 20:46 boinc_lockfile
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas      2787 Nov 27 20:46 pandaJob.out
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas        57 Nov 27 20:46 setup.sh.local
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas    991866 Nov 27 20:46 agis_schedconf.cvmfs.json
[2025-11-28 08:01:39] drwx------ 5 boincer umatlas      4096 Nov 27 20:46 pilot3
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas       532 Nov 28 07:51 boinc_task_state.xml
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas      5913 Nov 28 07:55 init_data.xml
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas 923937567 Nov 28 08:00 HITS.47556173._002670.pool.root.1
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas      1064 Nov 28 08:00 memory_monitor_summary.json
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas   1516240 Nov 28 08:00 agis_ddmendpoints.agis.ALL.json
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas   1919099 Nov 28 08:00 log.47556173._002670.job.log.tgz.1
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas        95 Nov 28 08:00 pilot_heartbeat.json
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas      8651 Nov 28 08:00 heartbeat.json
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 08:01 boinc_mmap_file
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas        29 Nov 28 08:01 wrapper_checkpoint.txt
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas      4738 Nov 28 08:01 pilotlog.txt
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas   5578558 Nov 28 08:01 log.47556173._002670.job.log.1
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas       353 Nov 28 08:01 output.list
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas       620 Nov 28 08:01 runtime_log
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas   7516160 Nov 28 08:01 result.tar.gz
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas       668 Nov 28 08:01 tfuNDmzrmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVeKKDmsgXxln.diag
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas      9343 Nov 28 08:01 runtime_log.err
[2025-11-28 08:01:39] -rw-r--r-- 1 boincer umatlas     21170 Nov 28 08:01 stderr.txt
[2025-11-28 08:01:39] HITS file was successfully produced:
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas 923937567 Nov 28 08:00 shared/HITS.pool.root.1
[2025-11-28 08:01:39]  *** Contents of shared directory: ***
[2025-11-28 08:01:39] total 1312896
[2025-11-28 08:01:39] -rw-r--r-- 2 boincer umatlas 412329932 Nov 27 20:46 ATLAS.root_0
[2025-11-28 08:01:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 20:46 start_atlas.sh
[2025-11-28 08:01:39] -rw-r--r-- 2 boincer umatlas    590111 Nov 27 20:46 input.tar.gz
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas 923937567 Nov 28 08:00 HITS.pool.root.1
[2025-11-28 08:01:39] -rw------- 1 boincer umatlas   7516160 Nov 28 08:01 result.tar.gz
08:01:40 (7943): run_atlas exited; CPU time 312564.032514
08:01:40 (7943): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN