Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:17:28 (16198): wrapper (7.7.26015): starting
20:17:28 (16198): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 20:17:28] Arguments: --nthreads 12
[2025-11-27 20:17:28] Threads: 12
[2025-11-27 20:17:28] Checking for CVMFS
[2025-11-27 20:17:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 20:17:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 20:17:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 20:17:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 20:17:28] 2.11.2.0 25590 190572 90912 153392 4 1 10863432 20275201 1 130560 2 100076463 99.967 7577216 25878 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 20:17:28] CVMFS is ok
[2025-11-27 20:17:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 20:17:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 20:17:28] Further information can be found at the LHC@home message board.
[2025-11-27 20:17:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 20:17:28] Checking for apptainer binary...
[2025-11-27 20:17:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 20:17:28] Running /usr/bin/apptainer --version
[2025-11-27 20:17:28] apptainer version 1.3.2-1.el7
[2025-11-27 20:17:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 20:17:30] c-205-24.aglt2.org
[2025-11-27 20:17:30] apptainer works
[2025-11-27 20:17:30] Set ATHENA_PROC_NUMBER=12
[2025-11-27 20:17:30] Set ATHENA_CORE_NUMBER=12
[2025-11-27 20:17:30] Starting ATLAS job with PandaID=6899792284
[2025-11-27 20:17:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 03:29:34]  *** The last 200 lines of the pilot log: ***
[2025-11-28 03:29:34] 2025-11-28 08:28:37,890 | INFO     | extracted standard info from prmon json
[2025-11-28 03:29:34] 2025-11-28 08:28:37,890 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 03:29:34] 2025-11-28 08:28:37,890 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 03:29:34] 2025-11-28 08:28:37,897 | INFO     | fitting pss+swap vs Time
[2025-11-28 03:29:34] 2025-11-28 08:28:37,898 | INFO     | sum of square deviations: 23635835274.89606
[2025-11-28 03:29:34] 2025-11-28 08:28:37,902 | INFO     | sum of deviations: 258672243933.39618
[2025-11-28 03:29:34] 2025-11-28 08:28:37,902 | INFO     | mean x: 1764305596.787736
[2025-11-28 03:29:34] 2025-11-28 08:28:37,902 | INFO     | mean y: 3419256.037735849
[2025-11-28 03:29:34] 2025-11-28 08:28:37,902 | INFO     | intersect: -19305265306.93421
[2025-11-28 03:29:34] 2025-11-28 08:28:37,903 | INFO     | chi2: 6.956512650578493
[2025-11-28 03:29:34] 2025-11-28 08:28:37,903 | INFO     | sum of square deviations: 22809512804.477287
[2025-11-28 03:29:34] 2025-11-28 08:28:37,907 | INFO     | sum of deviations: 425147957202.8831
[2025-11-28 03:29:34] 2025-11-28 08:28:37,907 | INFO     | mean x: 1764305444.2911694
[2025-11-28 03:29:34] 2025-11-28 08:28:37,907 | INFO     | mean y: 3449949.2386634843
[2025-11-28 03:29:34] 2025-11-28 08:28:37,908 | INFO     | intersect: -32881551232.15791
[2025-11-28 03:29:34] 2025-11-28 08:28:37,908 | INFO     | chi2: 3.7953751926441157
[2025-11-28 03:29:34] 2025-11-28 08:28:37,908 | INFO     | current chi2=3.7953751926441157 (change=45.44141032607052 %)
[2025-11-28 03:29:34] 2025-11-28 08:28:37,909 | INFO     | sum of square deviations: 22002679071.54823
[2025-11-28 03:29:34] 2025-11-28 08:28:37,912 | INFO     | sum of deviations: 518210383351.61115
[2025-11-28 03:29:34] 2025-11-28 08:28:37,912 | INFO     | mean x: 1764305291.794686
[2025-11-28 03:29:34] 2025-11-28 08:28:37,913 | INFO     | mean y: 3467525.277777778
[2025-11-28 03:29:34] 2025-11-28 08:28:37,913 | INFO     | intersect: -41549714186.69211
[2025-11-28 03:29:34] 2025-11-28 08:28:37,913 | INFO     | chi2: 2.7181957016896416
[2025-11-28 03:29:34] 2025-11-28 08:28:37,913 | INFO     | current chi2=2.7181957016896416 (change=28.381370385783594 %)
[2025-11-28 03:29:34] 2025-11-28 08:28:37,914 | INFO     | sum of square deviations: 21215101513.608837
[2025-11-28 03:29:34] 2025-11-28 08:28:37,917 | INFO     | sum of deviations: 525404367814.03864
[2025-11-28 03:29:34] 2025-11-28 08:28:37,918 | INFO     | mean x: 1764305139.2982886
[2025-11-28 03:29:34] 2025-11-28 08:28:37,918 | INFO     | mean y: 3468891.770171149
[2025-11-28 03:29:34] 2025-11-28 08:28:37,918 | INFO     | intersect: -43690577339.84703
[2025-11-28 03:29:34] 2025-11-28 08:28:37,918 | INFO     | chi2: 2.627803932196273
[2025-11-28 03:29:34] 2025-11-28 08:28:37,918 | INFO     | current chi2=2.627803932196273 (change=3.3254327286729417 %)
[2025-11-28 03:29:34] 2025-11-28 08:28:37,919 | INFO     | right removable region: 408
[2025-11-28 03:29:34] 2025-11-28 08:28:37,919 | INFO     | sum of square deviations: 22809438384.477283
[2025-11-28 03:29:34] 2025-11-28 08:28:37,923 | INFO     | sum of deviations: 113431149496.75168
[2025-11-28 03:29:34] 2025-11-28 08:28:37,923 | INFO     | mean x: 1764305749.2911694
[2025-11-28 03:29:34] 2025-11-28 08:28:37,923 | INFO     | mean y: 3445984.6085918853
[2025-11-28 03:29:34] 2025-11-28 08:28:37,923 | INFO     | intersect: -8770431996.623053
[2025-11-28 03:29:34] 2025-11-28 08:28:37,924 | INFO     | chi2: 4.495146105957588
[2025-11-28 03:29:34] 2025-11-28 08:28:37,924 | INFO     | current chi2=4.495146105957588 (change=35.382190305026214 %)
[2025-11-28 03:29:34] 2025-11-28 08:28:37,924 | INFO     | sum of square deviations: 22002581226.717392
[2025-11-28 03:29:34] 2025-11-28 08:28:37,928 | INFO     | sum of deviations: 80733360129.74625
[2025-11-28 03:29:34] 2025-11-28 08:28:37,928 | INFO     | mean x: 1764305901.789855
[2025-11-28 03:29:34] 2025-11-28 08:28:37,928 | INFO     | mean y: 3452158.606280193
[2025-11-28 03:29:34] 2025-11-28 08:28:37,928 | INFO     | intersect: -6470258461.094849
[2025-11-28 03:29:34] 2025-11-28 08:28:37,929 | INFO     | chi2: 4.425919818867251
[2025-11-28 03:29:34] 2025-11-28 08:28:37,929 | INFO     | current chi2=4.425919818867251 (change=1.5400230706314222 %)
[2025-11-28 03:29:34] 2025-11-28 08:28:37,929 | INFO     | left removable region: 20
[2025-11-28 03:29:34] 2025-11-28 08:28:37,930 | INFO     | sum of square deviations: 18112130573.718994
[2025-11-28 03:29:34] 2025-11-28 08:28:37,933 | INFO     | sum of deviations: 305922883548.6287
[2025-11-28 03:29:34] 2025-11-28 08:28:37,933 | INFO     | mean x: 1764305718.8015463
[2025-11-28 03:29:34] 2025-11-28 08:28:37,933 | INFO     | mean y: 3512221.618556701
[2025-11-28 03:29:34] 2025-11-28 08:28:37,933 | INFO     | intersect: -29796487881.09046
[2025-11-28 03:29:34] 2025-11-28 08:28:37,934 | INFO     | chi2: 0.029130566225835725
[2025-11-28 03:29:34] 2025-11-28 08:28:37,934 | INFO     | current memory leak: 16.89 B/s (using 388 data points, chi2=0.03)
[2025-11-28 03:29:34] 2025-11-28 08:28:37,934 | INFO     | could have reported an average CPU frequency of 2378 MHz (18 samples)
[2025-11-28 03:29:34] 2025-11-28 08:28:37,934 | INFO     | ..............................
[2025-11-28 03:29:34] 2025-11-28 08:28:37,934 | INFO     | . Timing measurements:
[2025-11-28 03:29:34] 2025-11-28 08:28:37,935 | INFO     | . get job = 0 s
[2025-11-28 03:29:34] 2025-11-28 08:28:37,935 | INFO     | . initial setup = 2 s
[2025-11-28 03:29:34] 2025-11-28 08:28:37,935 | INFO     | . payload setup = 7 s
[2025-11-28 03:29:34] 2025-11-28 08:28:37,935 | INFO     | . stage-in = 0 s
[2025-11-28 03:29:34] 2025-11-28 08:28:37,935 | INFO     | . payload execution = 25813 s
[2025-11-28 03:29:34] 2025-11-28 08:28:37,935 | INFO     | . stage-out = 3 s
[2025-11-28 03:29:34] 2025-11-28 08:28:37,935 | INFO     | . log creation = 0 s
[2025-11-28 03:29:34] 2025-11-28 08:28:37,935 | INFO     | ..............................
[2025-11-28 03:29:34] 2025-11-28 08:28:38,017 | INFO     | 
[2025-11-28 03:29:34] 2025-11-28 08:28:38,018 | INFO     | job summary report
[2025-11-28 03:29:34] 2025-11-28 08:28:38,018 | INFO     | --------------------------------------------------
[2025-11-28 03:29:34] 2025-11-28 08:28:38,018 | INFO     | PanDA job id: 6899792284
[2025-11-28 03:29:34] 2025-11-28 08:28:38,018 | INFO     | task id: 47556173
[2025-11-28 03:29:34] 2025-11-28 08:28:38,018 | INFO     | errors: (none)
[2025-11-28 03:29:34] 2025-11-28 08:28:38,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 03:29:34] 2025-11-28 08:28:38,019 | INFO     | pilot state: finished 
[2025-11-28 03:29:34] 2025-11-28 08:28:38,019 | INFO     | transexitcode: 0
[2025-11-28 03:29:34] 2025-11-28 08:28:38,019 | INFO     | exeerrorcode: 0
[2025-11-28 03:29:34] 2025-11-28 08:28:38,019 | INFO     | exeerrordiag: 
[2025-11-28 03:29:34] 2025-11-28 08:28:38,019 | INFO     | exitcode: 0
[2025-11-28 03:29:34] 2025-11-28 08:28:38,019 | INFO     | exitmsg: OK
[2025-11-28 03:29:34] 2025-11-28 08:28:38,020 | INFO     | cpuconsumptiontime: 294610 s
[2025-11-28 03:29:34] 2025-11-28 08:28:38,020 | INFO     | nevents: 1000
[2025-11-28 03:29:34] 2025-11-28 08:28:38,020 | INFO     | neventsw: 0
[2025-11-28 03:29:34] 2025-11-28 08:28:38,020 | INFO     | pid: 26434
[2025-11-28 03:29:34] 2025-11-28 08:28:38,020 | INFO     | pgrp: 26434
[2025-11-28 03:29:34] 2025-11-28 08:28:38,020 | INFO     | corecount: 12
[2025-11-28 03:29:34] 2025-11-28 08:28:38,020 | INFO     | event service: False
[2025-11-28 03:29:34] 2025-11-28 08:28:38,021 | INFO     | sizes: {0: 2284316, 5: 2284578, 11: 2284634, 25824: 2321900, 25825: 2321899, 25829: 2330949, 25831: 2331133, 25836: 2331379}
[2025-11-28 03:29:34] 2025-11-28 08:28:38,021 | INFO     | --------------------------------------------------
[2025-11-28 03:29:34] 2025-11-28 08:28:38,021 | INFO     | 
[2025-11-28 03:29:34] 2025-11-28 08:28:38,021 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 03:29:34] 2025-11-28 08:28:38,046 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,047 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,047 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 03:29:34] 2025-11-28 08:28:38,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 03:29:34] 2025-11-28 08:28:38,049 | INFO     | job 6899792284 has completed (purged errors)
[2025-11-28 03:29:34] 2025-11-28 08:28:38,049 | INFO     | overall cleanup function is called
[2025-11-28 03:29:34] 2025-11-28 08:28:39,066 | INFO     | --- collectZombieJob: --- 10, [26434]
[2025-11-28 03:29:34] 2025-11-28 08:28:39,066 | INFO     | zombie collector waiting for pid 26434
[2025-11-28 03:29:34] 2025-11-28 08:28:39,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 03:29:34] 2025-11-28 08:28:39,067 | INFO     | collected zombie processes
[2025-11-28 03:29:34] 2025-11-28 08:28:39,067 | INFO     | will attempt to kill all subprocesses of pid=26434
[2025-11-28 03:29:34] 2025-11-28 08:28:39,158 | INFO     | process IDs to be killed: [26434] (in reverse order)
[2025-11-28 03:29:34] 2025-11-28 08:28:39,209 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 03:29:34] 2025-11-28 08:28:39,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 03:29:34] 2025-11-28 08:28:39,213 | INFO     | did not find any defunct processes belonging to 26434
[2025-11-28 03:29:34] 2025-11-28 08:28:39,216 | INFO     | did not find any defunct processes belonging to 26434
[2025-11-28 03:29:34] 2025-11-28 08:28:39,218 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 03:29:34] 2025-11-28 08:28:39,218 | INFO     | ready for new job
[2025-11-28 03:29:34] 2025-11-28 08:28:39,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 03:29:34] 2025-11-28 08:28:39,220 | INFO     | ***************************************
[2025-11-28 03:29:34] 2025-11-28 08:28:39,220 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 03:29:34] 2025-11-28 08:28:39,221 | INFO     | ***************************************
[2025-11-28 03:29:34] 2025-11-28 08:28:39,221 | INFO     | 
[2025-11-28 03:29:34] 2025-11-28 08:28:39,221 | INFO     | architecture information:
[2025-11-28 03:29:34] 2025-11-28 08:28:39,222 | INFO     | executing command: cat /etc/os-release
[2025-11-28 03:29:34] 2025-11-28 08:28:39,239 | INFO     | cat /etc/os-release:
[2025-11-28 03:29:34] NAME="CentOS Linux"
[2025-11-28 03:29:34] VERSION="7 (Core)"
[2025-11-28 03:29:34] ID="centos"
[2025-11-28 03:29:34] ID_LIKE="rhel fedora"
[2025-11-28 03:29:34] VERSION_ID="7"
[2025-11-28 03:29:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 03:29:34] ANSI_COLOR="0;31"
[2025-11-28 03:29:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 03:29:34] HOME_URL="https://www.centos.org/"
[2025-11-28 03:29:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 03:29:34] 
[2025-11-28 03:29:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 03:29:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 03:29:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 03:29:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 03:29:34] 
[2025-11-28 03:29:34] 2025-11-28 08:28:39,239 | INFO     | ***************************************
[2025-11-28 03:29:34] 2025-11-28 08:28:39,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 03:29:34] 2025-11-28 08:28:39,765 | INFO     | sufficient remaining disk space (28248637440 B)
[2025-11-28 03:29:34] 2025-11-28 08:28:39,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 03:29:34] 2025-11-28 08:28:39,773 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 03:29:34] 2025-11-28 08:28:39,773 | INFO     | update_server=False
[2025-11-28 03:29:34] 2025-11-28 08:28:39,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 03:29:34] 2025-11-28 08:28:39,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:29:34] 2025-11-28 08:28:39,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:29:34] 2025-11-28 08:28:39,774 | INFO     | aborting loop
[2025-11-28 03:29:34] 2025-11-28 08:28:40,169 | INFO     | all payload control threads have been joined
[2025-11-28 03:29:34] 2025-11-28 08:28:40,266 | INFO     | all data control threads have been joined
[2025-11-28 03:29:34] 2025-11-28 08:28:40,777 | INFO     | [job] job monitor thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:40,779 | INFO     | [job] retrieve thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:40,782 | INFO     | [job] queue monitor thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:40,864 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:40,940 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:41,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 03:29:34] 2025-11-28 08:28:41,175 | INFO     | [payload] control thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:41,184 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:41,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:41,265 | INFO     | all job control threads have been joined
[2025-11-28 03:29:34] 2025-11-28 08:28:41,271 | INFO     | [data] control thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:41,628 | INFO     | [job] validate thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:41,871 | INFO     | [payload] validate_post thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:42,061 | INFO     | [data] copytool_in thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:42,221 | INFO     | [payload] failed_post thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:42,271 | INFO     | [job] control thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:42,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 03:29:34] 2025-11-28 08:28:43,103 | INFO     | [data] copytool_out thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:28:46,972 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 03:29:34] 2025-11-28 08:29:09,923 | INFO     | PID=19962 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 03:29:34] 2025-11-28 08:29:09,924 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 03:29:34] 2025-11-28 08:29:09,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 03:29:34] 2025-11-28 08:29:09,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 03:29:34] 2025-11-28 08:29:27,285 | INFO     | [monitor] cgroup control has ended
[2025-11-28 03:29:34] 2025-11-28 08:29:29,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682409719616)>', '<ExcThread(monitor, started 139681379374848)>']
[2025-11-28 03:29:34] 2025-11-28 08:29:30,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 03:29:34] 2025-11-28 08:29:30,005 | INFO     | [monitor] control thread has ended
[2025-11-28 03:29:34] 2025-11-28 08:29:34,303 | INFO     | all workflow threads have been joined
[2025-11-28 03:29:34] 2025-11-28 08:29:34,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 03:29:34] 2025-11-28 08:29:34,304 | INFO     | traces error code: 0
[2025-11-28 03:29:34] 2025-11-28 08:29:34,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 03:29:34] 2025-11-28 08:29:34,404 [wrapper] ==== pilot stdout END ====
[2025-11-28 03:29:34] 2025-11-28 08:29:34,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 03:29:34] 2025-11-28 08:29:34,413 [wrapper] pilotpid: 19962
[2025-11-28 03:29:34] 2025-11-28 08:29:34,417 [wrapper] Pilot exit status: 0
[2025-11-28 03:29:34] 2025-11-28 08:29:34,432 [wrapper] pandaids: 6899792284
[2025-11-28 03:29:34] 2025-11-28 08:29:34,482 [wrapper] cleanup supervisor_pilot 19126 19963
[2025-11-28 03:29:34] 2025-11-28 08:29:34,486 [wrapper] Test setup, not cleaning
[2025-11-28 03:29:34] 2025-11-28 08:29:34,490 [wrapper] apfmon messages muted
[2025-11-28 03:29:34] 2025-11-28 08:29:34,494 [wrapper] ==== wrapper stdout END ====
[2025-11-28 03:29:34] 2025-11-28 08:29:34,498 [wrapper] ==== wrapper stderr END ====
[2025-11-28 03:29:34]  *** Error codes and diagnostics ***
[2025-11-28 03:29:34]     "exeErrorCode": 0,
[2025-11-28 03:29:34]     "exeErrorDiag": "",
[2025-11-28 03:29:34]     "pilotErrorCode": 0,
[2025-11-28 03:29:34]     "pilotErrorDiag": "",
[2025-11-28 03:29:34]  *** Listing of results directory ***
[2025-11-28 03:29:34] total 1306120
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-11-28 03:29:34] -rwx------ 1 boincer umatlas     36292 Nov 27 03:47 runpilot2-wrapper.sh
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 03:49 queuedata.json
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas       100 Nov 27 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 03:29:34] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 20:17 run_atlas
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas       105 Nov 27 20:17 job.xml
[2025-11-28 03:29:34] -rw-r--r-- 2 boincer umatlas 411395287 Nov 27 20:17 EVNT.47483658._003417.pool.root.1
[2025-11-28 03:29:34] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 20:17 start_atlas.sh
[2025-11-28 03:29:34] drwxrwx--x 2 boincer umatlas      4096 Nov 27 20:17 shared
[2025-11-28 03:29:34] -rw-r--r-- 2 boincer umatlas    590108 Nov 27 20:17 input.tar.gz
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas         0 Nov 27 20:17 boinc_lockfile
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas      2787 Nov 27 20:17 pandaJob.out
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas        57 Nov 27 20:17 setup.sh.local
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas    991866 Nov 27 20:17 agis_schedconf.cvmfs.json
[2025-11-28 03:29:34] drwx------ 5 boincer umatlas      4096 Nov 27 20:17 pilot3
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas       533 Nov 28 03:15 boinc_task_state.xml
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas      5956 Nov 28 03:22 init_data.xml
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas 910559614 Nov 28 03:27 HITS.47556173._003739.pool.root.1
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas      1061 Nov 28 03:28 memory_monitor_summary.json
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas   1516240 Nov 28 03:28 agis_ddmendpoints.agis.ALL.json
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas   2174607 Nov 28 03:28 log.47556173._003739.job.log.tgz.1
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas      8666 Nov 28 03:28 heartbeat.json
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas        95 Nov 28 03:29 pilot_heartbeat.json
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 03:29 boinc_mmap_file
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas        29 Nov 28 03:29 wrapper_checkpoint.txt
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas      4746 Nov 28 03:29 pilotlog.txt
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas   3623358 Nov 28 03:29 log.47556173._003739.job.log.1
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas       353 Nov 28 03:29 output.list
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas       620 Nov 28 03:29 runtime_log
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas   5816320 Nov 28 03:29 result.tar.gz
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas      9345 Nov 28 03:29 runtime_log.err
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas       670 Nov 28 03:29 OhCNDm3pmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMdKKDmuLlnDm.diag
[2025-11-28 03:29:34] -rw-r--r-- 1 boincer umatlas     21109 Nov 28 03:29 stderr.txt
[2025-11-28 03:29:34] HITS file was successfully produced:
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas 910559614 Nov 28 03:27 shared/HITS.pool.root.1
[2025-11-28 03:29:34]  *** Contents of shared directory: ***
[2025-11-28 03:29:34] total 1297256
[2025-11-28 03:29:34] -rw-r--r-- 2 boincer umatlas 411395287 Nov 27 20:17 ATLAS.root_0
[2025-11-28 03:29:34] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 20:17 start_atlas.sh
[2025-11-28 03:29:34] -rw-r--r-- 2 boincer umatlas    590108 Nov 27 20:17 input.tar.gz
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas 910559614 Nov 28 03:27 HITS.pool.root.1
[2025-11-28 03:29:34] -rw------- 1 boincer umatlas   5816320 Nov 28 03:29 result.tar.gz
03:29:36 (16198): run_atlas exited; CPU time 287903.348905
03:29:36 (16198): called boinc_finish(0)

</stderr_txt>
]]>

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