Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:00:18 (2352742): wrapper (7.7.26015): starting
11:00:18 (2352742): wrapper: running run_atlas (--nthreads 6)
[2025-11-28 11:00:18] Arguments: --nthreads 6
[2025-11-28 11:00:18] Threads: 6
[2025-11-28 11:00:18] Checking for CVMFS
[2025-11-28 11:00:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 11:00:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 11:00:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 11:00:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 11:00:43] 2.13.3.0 1560231 3866 82212 153392 0 56 19378308 20971520 916 130560 0 2716729 99.988 157285 17 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://134.75.124.180:3128 0
[2025-11-28 11:00:43] CVMFS is ok
[2025-11-28 11:00:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 11:00:43] Checking for apptainer binary...
[2025-11-28 11:00:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 11:00:43] Running /usr/bin/apptainer --version
[2025-11-28 11:00:43] apptainer version 1.4.4-1.el9
[2025-11-28 11:00:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 11:00:44] testio005
[2025-11-28 11:00:44] apptainer works
[2025-11-28 11:00:44] Set ATHENA_PROC_NUMBER=6
[2025-11-28 11:00:44] Set ATHENA_CORE_NUMBER=6
[2025-11-28 11:00:44] Starting ATLAS job with PandaID=6899596517
[2025-11-28 11:00:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 21:35:22]  *** The last 200 lines of the pilot log: ***
[2025-11-28 21:35:23] 2025-11-28 12:34:48,006 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 21:35:23] 2025-11-28 12:34:48,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 21:35:23] 2025-11-28 12:34:48,015 | INFO     | fitting pss+swap vs Time
[2025-11-28 21:35:23] 2025-11-28 12:34:48,015 | INFO     | sum of square deviations: 74259362389.35582
[2025-11-28 21:35:23] 2025-11-28 12:34:48,023 | INFO     | sum of deviations: 795982648490.2076
[2025-11-28 21:35:23] 2025-11-28 12:34:48,023 | INFO     | mean x: 1764314270.032206
[2025-11-28 21:35:23] 2025-11-28 12:34:48,023 | INFO     | mean y: 2676782.389694042
[2025-11-28 21:35:23] 2025-11-28 12:34:48,023 | INFO     | intersect: -18908925744.790115
[2025-11-28 21:35:23] 2025-11-28 12:34:48,024 | INFO     | chi2: 8.912708083610958
[2025-11-28 21:35:23] 2025-11-28 12:34:48,025 | INFO     | sum of square deviations: 72480060709.35074
[2025-11-28 21:35:23] 2025-11-28 12:34:48,030 | INFO     | sum of deviations: 984101429667.7543
[2025-11-28 21:35:23] 2025-11-28 12:34:48,030 | INFO     | mean x: 1764314117.5324676
[2025-11-28 21:35:23] 2025-11-28 12:34:48,030 | INFO     | mean y: 2692909.162337662
[2025-11-28 21:35:23] 2025-11-28 12:34:48,030 | INFO     | intersect: -23952364915.764484
[2025-11-28 21:35:23] 2025-11-28 12:34:48,030 | INFO     | chi2: 5.9170858834323665
[2025-11-28 21:35:23] 2025-11-28 12:34:48,030 | INFO     | current chi2=5.9170858834323665 (change=33.61068456496473 %)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,031 | INFO     | sum of square deviations: 70729410729.34547
[2025-11-28 21:35:23] 2025-11-28 12:34:48,037 | INFO     | sum of deviations: 1076822578636.0155
[2025-11-28 21:35:23] 2025-11-28 12:34:48,037 | INFO     | mean x: 1764313965.0327332
[2025-11-28 21:35:23] 2025-11-28 12:34:48,037 | INFO     | mean y: 2700959.499181669
[2025-11-28 21:35:23] 2025-11-28 12:34:48,037 | INFO     | intersect: -26858163478.06973
[2025-11-28 21:35:23] 2025-11-28 12:34:48,037 | INFO     | chi2: 4.652050908186738
[2025-11-28 21:35:23] 2025-11-28 12:34:48,037 | INFO     | current chi2=4.652050908186738 (change=21.379358017900028 %)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,038 | INFO     | right removable region: 610
[2025-11-28 21:35:23] 2025-11-28 12:34:48,038 | INFO     | sum of square deviations: 72480048509.35074
[2025-11-28 21:35:23] 2025-11-28 12:34:48,042 | INFO     | sum of deviations: 607654891260.7682
[2025-11-28 21:35:23] 2025-11-28 12:34:48,043 | INFO     | mean x: 1764314422.5324676
[2025-11-28 21:35:23] 2025-11-28 12:34:48,043 | INFO     | mean y: 2692913.686688312
[2025-11-28 21:35:23] 2025-11-28 12:34:48,043 | INFO     | intersect: -14788885053.254925
[2025-11-28 21:35:23] 2025-11-28 12:34:48,043 | INFO     | chi2: 6.173280405965144
[2025-11-28 21:35:23] 2025-11-28 12:34:48,043 | INFO     | current chi2=6.173280405965144 (change=30.73619882921087 %)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,044 | INFO     | sum of square deviations: 70729386329.34547
[2025-11-28 21:35:23] 2025-11-28 12:34:48,048 | INFO     | sum of deviations: 458977801504.909
[2025-11-28 21:35:23] 2025-11-28 12:34:48,048 | INFO     | mean x: 1764314575.0327332
[2025-11-28 21:35:23] 2025-11-28 12:34:48,048 | INFO     | mean y: 2705860.2045826516
[2025-11-28 21:35:23] 2025-11-28 12:34:48,048 | INFO     | intersect: -11446300936.50242
[2025-11-28 21:35:23] 2025-11-28 12:34:48,049 | INFO     | chi2: 4.606371396350986
[2025-11-28 21:35:23] 2025-11-28 12:34:48,049 | INFO     | current chi2=4.606371396350986 (change=25.382113018875323 %)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,049 | INFO     | sum of square deviations: 69007143286.83987
[2025-11-28 21:35:23] 2025-11-28 12:34:48,053 | INFO     | sum of deviations: 421221723110.5409
[2025-11-28 21:35:23] 2025-11-28 12:34:48,053 | INFO     | mean x: 1764314727.5330033
[2025-11-28 21:35:23] 2025-11-28 12:34:48,053 | INFO     | mean y: 2709196.3729372937
[2025-11-28 21:35:23] 2025-11-28 12:34:48,053 | INFO     | intersect: -10766722115.27626
[2025-11-28 21:35:23] 2025-11-28 12:34:48,054 | INFO     | chi2: 4.522060612074103
[2025-11-28 21:35:23] 2025-11-28 12:34:48,054 | INFO     | current chi2=4.522060612074103 (change=1.830308002165676 %)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,054 | INFO     | left removable region: 30
[2025-11-28 21:35:23] 2025-11-28 12:34:48,054 | INFO     | sum of square deviations: 60500625424.31044
[2025-11-28 21:35:23] 2025-11-28 12:34:48,058 | INFO     | sum of deviations: 609708475056.12
[2025-11-28 21:35:23] 2025-11-28 12:34:48,058 | INFO     | mean x: 1764314849.5344827
[2025-11-28 21:35:23] 2025-11-28 12:34:48,058 | INFO     | mean y: 2742817.418965517
[2025-11-28 21:35:23] 2025-11-28 12:34:48,058 | INFO     | intersect: -17777531500.146866
[2025-11-28 21:35:23] 2025-11-28 12:34:48,059 | INFO     | chi2: 0.16219312175970133
[2025-11-28 21:35:23] 2025-11-28 12:34:48,059 | INFO     | current memory leak: 10.08 B/s (using 580 data points, chi2=0.16)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,059 | INFO     | could have reported an average CPU frequency of 3285 MHz (24 samples)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,059 | INFO     | ..............................
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | . Timing measurements:
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | . get job = 0 s
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | . initial setup = 7 s
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | . payload setup = 5 s
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | . stage-in = 0 s
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | . payload execution = 37876 s
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | . stage-out = 6 s
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | . log creation = 0 s
[2025-11-28 21:35:23] 2025-11-28 12:34:48,060 | INFO     | ..............................
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | 
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | job summary report
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | --------------------------------------------------
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | PanDA job id: 6899596517
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | task id: 47556173
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | errors: (none)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | pilot state: finished 
[2025-11-28 21:35:23] 2025-11-28 12:34:48,178 | INFO     | transexitcode: 0
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | exeerrorcode: 0
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | exeerrordiag: 
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | exitcode: 0
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | exitmsg: OK
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | cpuconsumptiontime: 218901 s
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | nevents: 1000
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | neventsw: 0
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | pid: 2363636
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | pgrp: 2363636
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | corecount: 6
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | event service: False
[2025-11-28 21:35:23] 2025-11-28 12:34:48,179 | INFO     | sizes: {0: 2284316, 1: 2284316, 5: 2284606, 11: 2284662, 37885: 2327282, 37886: 2327281, 37892: 2336459, 37895: 2336515, 37939: 2336539}
[2025-11-28 21:35:23] 2025-11-28 12:34:48,180 | INFO     | --------------------------------------------------
[2025-11-28 21:35:23] 2025-11-28 12:34:48,180 | INFO     | 
[2025-11-28 21:35:23] 2025-11-28 12:34:48,180 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-28 21:35:23] 2025-11-28 12:34:48,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,198 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 21:35:23] 2025-11-28 12:34:48,199 | INFO     | job 6899596517 has completed (purged errors)
[2025-11-28 21:35:23] 2025-11-28 12:34:48,199 | INFO     | overall cleanup function is called
[2025-11-28 21:35:23] 2025-11-28 12:34:49,216 | INFO     | --- collectZombieJob: --- 10, [2363636]
[2025-11-28 21:35:23] 2025-11-28 12:34:49,216 | INFO     | zombie collector waiting for pid 2363636
[2025-11-28 21:35:23] 2025-11-28 12:34:49,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 21:35:23] 2025-11-28 12:34:49,217 | INFO     | collected zombie processes
[2025-11-28 21:35:23] 2025-11-28 12:34:49,217 | INFO     | will attempt to kill all subprocesses of pid=2363636
[2025-11-28 21:35:23] 2025-11-28 12:34:49,326 | INFO     | process IDs to be killed: [2363636] (in reverse order)
[2025-11-28 21:35:23] 2025-11-28 12:34:49,371 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 21:35:23] 2025-11-28 12:34:49,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 21:35:23] 2025-11-28 12:34:49,375 | INFO     | did not find any defunct processes belonging to 2363636
[2025-11-28 21:35:23] 2025-11-28 12:34:49,378 | INFO     | did not find any defunct processes belonging to 2363636
[2025-11-28 21:35:23] 2025-11-28 12:34:49,379 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 21:35:23] 2025-11-28 12:34:49,379 | INFO     | ready for new job
[2025-11-28 21:35:23] 2025-11-28 12:34:49,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 21:35:23] 2025-11-28 12:34:49,382 | INFO     | ***************************************
[2025-11-28 21:35:23] 2025-11-28 12:34:49,382 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 21:35:23] 2025-11-28 12:34:49,382 | INFO     | ***************************************
[2025-11-28 21:35:23] 2025-11-28 12:34:49,382 | INFO     | 
[2025-11-28 21:35:23] 2025-11-28 12:34:49,383 | INFO     | architecture information:
[2025-11-28 21:35:23] 2025-11-28 12:34:49,383 | INFO     | executing command: cat /etc/os-release
[2025-11-28 21:35:23] 2025-11-28 12:34:49,396 | INFO     | cat /etc/os-release:
[2025-11-28 21:35:23] NAME="CentOS Linux"
[2025-11-28 21:35:23] VERSION="7 (Core)"
[2025-11-28 21:35:23] ID="centos"
[2025-11-28 21:35:23] ID_LIKE="rhel fedora"
[2025-11-28 21:35:23] VERSION_ID="7"
[2025-11-28 21:35:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 21:35:23] ANSI_COLOR="0;31"
[2025-11-28 21:35:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 21:35:23] HOME_URL="https://www.centos.org/"
[2025-11-28 21:35:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 21:35:23] 
[2025-11-28 21:35:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 21:35:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 21:35:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 21:35:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 21:35:23] 
[2025-11-28 21:35:23] 2025-11-28 12:34:49,397 | INFO     | ***************************************
[2025-11-28 21:35:23] 2025-11-28 12:34:49,900 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-28 21:35:23] 2025-11-28 12:34:49,914 | INFO     | sufficient remaining disk space (88789221376 B)
[2025-11-28 21:35:23] 2025-11-28 12:34:49,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 21:35:23] 2025-11-28 12:34:49,915 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 21:35:23] 2025-11-28 12:34:49,915 | INFO     | update_server=False
[2025-11-28 21:35:23] 2025-11-28 12:34:49,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 21:35:23] 2025-11-28 12:34:49,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 21:35:23] 2025-11-28 12:34:49,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 21:35:23] 2025-11-28 12:34:50,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 21:35:23] 2025-11-28 12:34:50,576 | INFO     | aborting loop
[2025-11-28 21:35:23] 2025-11-28 12:34:50,920 | INFO     | [job] retrieve thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:50,920 | INFO     | [job] queue monitor thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:50,921 | INFO     | all data control threads have been joined
[2025-11-28 21:35:23] 2025-11-28 12:34:50,955 | INFO     | [job] validate thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,010 | INFO     | all job control threads have been joined
[2025-11-28 21:35:23] 2025-11-28 12:34:51,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 21:35:23] 2025-11-28 12:34:51,193 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,222 | INFO     | [data] copytool_in thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,308 | INFO     | all payload control threads have been joined
[2025-11-28 21:35:23] 2025-11-28 12:34:51,436 | INFO     | [payload] failed_post thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,523 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,581 | INFO     | [job] job monitor thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,791 | INFO     | [payload] validate_post thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,920 | INFO     | [data] copytool_out thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:51,926 | INFO     | [data] control thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:52,012 | INFO     | [job] control thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:52,091 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:52,313 | INFO     | [payload] control thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:34:55,109 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 21:35:23] 2025-11-28 12:35:17,182 | INFO     | [monitor] cgroup control has ended
[2025-11-28 21:35:23] 2025-11-28 12:35:17,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904640522048)>', '<ExcThread(monitor, started 139903862044416)>']
[2025-11-28 21:35:23] 2025-11-28 12:35:20,214 | INFO     | PID=2356903 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 21:35:23] 2025-11-28 12:35:20,214 | INFO     | .. there are 2 such processes running
[2025-11-28 21:35:23] 2025-11-28 12:35:20,215 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 21:35:23] 2025-11-28 12:35:20,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 21:35:23] 2025-11-28 12:35:20,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 21:35:23] 2025-11-28 12:35:20,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 21:35:23] 2025-11-28 12:35:20,215 | INFO     | [monitor] control thread has ended
[2025-11-28 21:35:23] 2025-11-28 12:35:22,801 | INFO     | all workflow threads have been joined
[2025-11-28 21:35:23] 2025-11-28 12:35:22,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 21:35:23] 2025-11-28 12:35:22,801 | INFO     | traces error code: 0
[2025-11-28 21:35:23] 2025-11-28 12:35:22,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 21:35:23] 2025-11-28 12:35:22,892 [wrapper] ==== pilot stdout END ====
[2025-11-28 21:35:23] 2025-11-28 12:35:22,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 21:35:23] 2025-11-28 12:35:22,896 [wrapper] pilotpid: 2356903
[2025-11-28 21:35:23] 2025-11-28 12:35:22,899 [wrapper] Pilot exit status: 0
[2025-11-28 21:35:23] 2025-11-28 12:35:22,907 [wrapper] pandaids: 6899596517
[2025-11-28 21:35:23] 2025-11-28 12:35:22,935 [wrapper] cleanup supervisor_pilot 2451549 2356904
[2025-11-28 21:35:23] 2025-11-28 12:35:22,937 [wrapper] Test setup, not cleaning
[2025-11-28 21:35:23] 2025-11-28 12:35:22,940 [wrapper] apfmon messages muted
[2025-11-28 21:35:23] 2025-11-28 12:35:22,942 [wrapper] ==== wrapper stdout END ====
[2025-11-28 21:35:23] 2025-11-28 12:35:22,944 [wrapper] ==== wrapper stderr END ====
[2025-11-28 21:35:23]  *** Error codes and diagnostics ***
[2025-11-28 21:35:23]     "exeErrorCode": 0,
[2025-11-28 21:35:23]     "exeErrorDiag": "",
[2025-11-28 21:35:23]     "pilotErrorCode": 0,
[2025-11-28 21:35:23]     "pilotErrorDiag": "",
[2025-11-28 21:35:23]  *** Listing of results directory ***
[2025-11-28 21:35:23] total 1319540
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc    576529 Nov 27 17:46 pilot3.tar.gz
[2025-11-28 21:35:23] -rwx------. 1 boinc boinc     36292 Nov 27 17:47 runpilot2-wrapper.sh
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc      5112 Nov 27 17:49 queuedata.json
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc       100 Nov 28 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 21:35:23] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 11:00 run_atlas
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc       105 Nov 28 11:00 job.xml
[2025-11-28 21:35:23] -rw-r--r--. 2 boinc boinc 408617643 Nov 28 11:00 EVNT.47483658._003412.pool.root.1
[2025-11-28 21:35:23] -rw-r--r--. 2 boinc boinc     15847 Nov 28 11:00 start_atlas.sh
[2025-11-28 21:35:23] drwxrwx--x. 2 boinc boinc        68 Nov 28 11:00 shared
[2025-11-28 21:35:23] -rw-r--r--. 2 boinc boinc    590104 Nov 28 11:00 input.tar.gz
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc         0 Nov 28 11:00 boinc_lockfile
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc      2787 Nov 28 11:00 pandaJob.out
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc    991866 Nov 28 11:02 agis_schedconf.cvmfs.json
[2025-11-28 21:35:23] drwx------. 5 boinc boinc      4096 Nov 28 11:02 pilot3
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc      9372 Nov 28 19:05 init_data.xml
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc       532 Nov 28 21:23 boinc_task_state.xml
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc 924962445 Nov 28 21:33 HITS.47556173._003687.pool.root.1
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc      1031 Nov 28 21:33 memory_monitor_summary.json
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc   1516240 Nov 28 21:34 agis_ddmendpoints.agis.ALL.json
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc   1649332 Nov 28 21:34 log.47556173._003687.job.log.tgz.1
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc      8576 Nov 28 21:34 heartbeat.json
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc      8192 Nov 28 21:35 boinc_mmap_file
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc        29 Nov 28 21:35 wrapper_checkpoint.txt
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc        95 Nov 28 21:35 pilot_heartbeat.json
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc      4823 Nov 28 21:35 pilotlog.txt
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc   5212786 Nov 28 21:35 log.47556173._003687.job.log.1
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc       353 Nov 28 21:35 output.list
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc       620 Nov 28 21:35 runtime_log
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc   6881280 Nov 28 21:35 result.tar.gz
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc      8776 Nov 28 21:35 runtime_log.err
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc       653 Nov 28 21:35 qeAMDm3pmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwcKKDmtGxwFn.diag
[2025-11-28 21:35:23] -rw-r--r--. 1 boinc boinc     20815 Nov 28 21:35 stderr.txt
[2025-11-28 21:35:23] HITS file was successfully produced:
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc 924962445 Nov 28 21:33 shared/HITS.pool.root.1
[2025-11-28 21:35:23]  *** Contents of shared directory: ***
[2025-11-28 21:35:23] total 1309644
[2025-11-28 21:35:23] -rw-r--r--. 2 boinc boinc 408617643 Nov 28 11:00 ATLAS.root_0
[2025-11-28 21:35:23] -rw-r--r--. 2 boinc boinc     15847 Nov 28 11:00 start_atlas.sh
[2025-11-28 21:35:23] -rw-r--r--. 2 boinc boinc    590104 Nov 28 11:00 input.tar.gz
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc 924962445 Nov 28 21:33 HITS.pool.root.1
[2025-11-28 21:35:23] -rw-------. 1 boinc boinc   6881280 Nov 28 21:35 result.tar.gz
21:35:24 (2352742): run_atlas exited; CPU time 218875.856765
21:35:24 (2352742): called boinc_finish(0)

</stderr_txt>
]]>

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