Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:22:57 (1725694): wrapper (7.7.26015): starting
02:22:57 (1725694): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 02:22:57] Arguments: --nthreads 8
[2025-11-28 02:22:57] Threads: 8
[2025-11-28 02:22:57] Checking for CVMFS
[2025-11-28 02:22:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 02:22:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 02:22:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 02:22:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 02:22:59] 2.13.2.0 5678 35476 182404 153400 0 323 25926084 39288833 8809 16776704 0 27951417 99.764 17041380 34544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 02:22:59] CVMFS is ok
[2025-11-28 02:23:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 02:23:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 02:23:00] Further information can be found at the LHC@home message board.
[2025-11-28 02:23:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 02:23:00] Checking for apptainer binary...
[2025-11-28 02:23:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 02:23:00] Running /usr/bin/apptainer --version
[2025-11-28 02:23:00] apptainer version 1.4.4-1.el9
[2025-11-28 02:23:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 02:23:00] c-210-21.aglt2.org
[2025-11-28 02:23:00] apptainer works
[2025-11-28 02:23:00] Set ATHENA_PROC_NUMBER=8
[2025-11-28 02:23:00] Set ATHENA_CORE_NUMBER=8
[2025-11-28 02:23:01] Starting ATLAS job with PandaID=6899596286
[2025-11-28 02:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 04:09:43]  *** The last 200 lines of the pilot log: ***
[2025-11-29 04:09:43] 2025-11-29 09:09:04,913 | INFO     | job 6899596286 has state=finished
[2025-11-29 04:09:43] 2025-11-29 09:09:04,913 | INFO     | preparing for final server update for job 6899596286 in state='finished'
[2025-11-29 04:09:43] 2025-11-29 09:09:04,914 | INFO     | this job has now completed (state=finished)
[2025-11-29 04:09:43] 2025-11-29 09:09:04,914 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-29 04:09:43] 2025-11-29 09:09:04,914 | INFO     | log transfer has been attempted: DONE
[2025-11-29 04:09:43] 2025-11-29 09:09:04,914 | INFO     | job 6899596286 has finished - writing final server update
[2025-11-29 04:09:43] 2025-11-29 09:09:04,914 | INFO     | total number of processed events: 1000 (read)
[2025-11-29 04:09:43] 2025-11-29 09:09:04,915 | INFO     | executing command: lscpu
[2025-11-29 04:09:43] 2025-11-29 09:09:04,955 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-29 04:09:43] 2025-11-29 09:09:05,640 | INFO     | time since job start (92666s) is within the limit (172800.0s)
[2025-11-29 04:09:43] 2025-11-29 09:09:06,702 | INFO     | monitor loop #6263: job 0:6899596286 is in state 'finished'
[2025-11-29 04:09:43] 2025-11-29 09:09:06,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 04:09:43] 2025-11-29 09:09:07,648 | INFO     | time since job start (92668s) is within the limit (172800.0s)
[2025-11-29 04:09:43] 2025-11-29 09:09:09,207 | INFO     | monitor loop #6264: job 0:6899596286 is in state 'finished'
[2025-11-29 04:09:43] 2025-11-29 09:09:09,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 04:09:43] 2025-11-29 09:09:09,642 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 04:09:43] 2025-11-29 09:09:09,648 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1851250000004
[2025-11-29 04:09:43] 2025-11-29 09:09:09,654 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6899596286/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 04:09:43] 2025-11-29 09:09:09,655 | INFO     | extracted standard info from prmon json
[2025-11-29 04:09:43] 2025-11-29 09:09:09,655 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 04:09:43] 2025-11-29 09:09:09,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 04:09:43] 2025-11-29 09:09:09,682 | INFO     | fitting pss+swap vs Time
[2025-11-29 04:09:43] 2025-11-29 09:09:09,684 | INFO     | sum of square deviations: 1080311323339.5123
[2025-11-29 04:09:43] 2025-11-29 09:09:09,692 | INFO     | time since job start (92670s) is within the limit (172800.0s)
[2025-11-29 04:09:43] 2025-11-29 09:09:09,740 | INFO     | sum of deviations: 4890051000574.974
[2025-11-29 04:09:43] 2025-11-29 09:09:09,740 | INFO     | mean x: 1764361069.262533
[2025-11-29 04:09:43] 2025-11-29 09:09:09,740 | INFO     | mean y: 2907385.580474934
[2025-11-29 04:09:43] 2025-11-29 09:09:09,741 | INFO     | intersect: -7983508590.743874
[2025-11-29 04:09:43] 2025-11-29 09:09:09,742 | INFO     | chi2: 19.842380925284175
[2025-11-29 04:09:43] 2025-11-29 09:09:09,744 | INFO     | sum of square deviations: 1069657594328.9276
[2025-11-29 04:09:43] 2025-11-29 09:09:09,799 | INFO     | sum of deviations: 5357589166289.321
[2025-11-29 04:09:43] 2025-11-29 09:09:09,799 | INFO     | mean x: 1764360916.7683654
[2025-11-29 04:09:43] 2025-11-29 09:09:09,799 | INFO     | mean y: 2914077.8266048976
[2025-11-29 04:09:43] 2025-11-29 09:09:09,799 | INFO     | intersect: -8834232484.978714
[2025-11-29 04:09:43] 2025-11-29 09:09:09,801 | INFO     | chi2: 17.14294110104998
[2025-11-29 04:09:43] 2025-11-29 09:09:09,801 | INFO     | current chi2=17.14294110104998 (change=13.604414885485994 %)
[2025-11-29 04:09:43] 2025-11-29 09:09:09,801 | INFO     | right removable region: 1510
[2025-11-29 04:09:43] 2025-11-29 09:09:09,803 | INFO     | sum of square deviations: 1069655964408.9276
[2025-11-29 04:09:43] 2025-11-29 09:09:09,858 | INFO     | sum of deviations: 4265592921958.12
[2025-11-29 04:09:43] 2025-11-29 09:09:09,858 | INFO     | mean x: 1764361221.7683654
[2025-11-29 04:09:43] 2025-11-29 09:09:09,858 | INFO     | mean y: 2916322.086035738
[2025-11-29 04:09:43] 2025-11-29 09:09:09,858 | INFO     | intersect: -7033034478.703709
[2025-11-29 04:09:43] 2025-11-29 09:09:09,860 | INFO     | chi2: 15.541975006748816
[2025-11-29 04:09:43] 2025-11-29 09:09:09,860 | INFO     | current chi2=15.541975006748816 (change=21.672832180414208 %)
[2025-11-29 04:09:43] 2025-11-29 09:09:09,860 | INFO     | left removable region: 10
[2025-11-29 04:09:43] 2025-11-29 09:09:09,862 | INFO     | sum of square deviations: 1046463374040.4006
[2025-11-29 04:09:43] 2025-11-29 09:09:09,916 | INFO     | sum of deviations: 4312442464992.8047
[2025-11-29 04:09:43] 2025-11-29 09:09:09,916 | INFO     | mean x: 1764361191.28
[2025-11-29 04:09:43] 2025-11-29 09:09:09,916 | INFO     | mean y: 2932390.243333333
[2025-11-29 04:09:43] 2025-11-29 09:09:09,916 | INFO     | intersect: -7267944272.629167
[2025-11-29 04:09:43] 2025-11-29 09:09:09,918 | INFO     | chi2: 9.073628579731391
[2025-11-29 04:09:43] 2025-11-29 09:09:09,919 | INFO     | current memory leak: 4.12 B/s (using 1500 data points, chi2=9.07)
[2025-11-29 04:09:43] 2025-11-29 09:09:09,920 | INFO     | could have reported an average CPU frequency of 2592 MHz (54 samples)
[2025-11-29 04:09:43] 2025-11-29 09:09:09,920 | INFO     | ..............................
[2025-11-29 04:09:43] 2025-11-29 09:09:09,920 | INFO     | . Timing measurements:
[2025-11-29 04:09:43] 2025-11-29 09:09:09,920 | INFO     | . get job = 0 s
[2025-11-29 04:09:43] 2025-11-29 09:09:09,921 | INFO     | . initial setup = 10 s
[2025-11-29 04:09:43] 2025-11-29 09:09:09,921 | INFO     | . payload setup = 58 s
[2025-11-29 04:09:43] 2025-11-29 09:09:09,921 | INFO     | . stage-in = 0 s
[2025-11-29 04:09:43] 2025-11-29 09:09:09,921 | INFO     | . payload execution = 92506 s
[2025-11-29 04:09:43] 2025-11-29 09:09:09,921 | INFO     | . stage-out = 4 s
[2025-11-29 04:09:43] 2025-11-29 09:09:09,921 | INFO     | . log creation = 1 s
[2025-11-29 04:09:43] 2025-11-29 09:09:09,921 | INFO     | ..............................
[2025-11-29 04:09:43] 2025-11-29 09:09:10,024 | INFO     | 
[2025-11-29 04:09:43] 2025-11-29 09:09:10,024 | INFO     | job summary report
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | --------------------------------------------------
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | PanDA job id: 6899596286
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | task id: 47556173
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | errors: (none)
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | pilot state: finished 
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | transexitcode: 0
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | exeerrorcode: 0
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | exeerrordiag: 
[2025-11-29 04:09:43] 2025-11-29 09:09:10,025 | INFO     | exitcode: 0
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | exitmsg: OK
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | cpuconsumptiontime: 299702 s
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | nevents: 1000
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | neventsw: 0
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | pid: 1741870
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | pgrp: 1741870
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | corecount: 8
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | event service: False
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | sizes: {0: 2284089, 2: 2284173, 3: 2284173, 4: 2284400, 15: 2284400, 27: 2284428, 38: 2284584, 44: 2284874, 49: 2284902, 92569: 2353744, 92574: 2362738, 92577: 236
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | --------------------------------------------------
[2025-11-29 04:09:43] 2025-11-29 09:09:10,026 | INFO     | 
[2025-11-29 04:09:43] 2025-11-29 09:09:10,027 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-29 04:09:43] 2025-11-29 09:09:10,073 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 04:09:43] 2025-11-29 09:09:10,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 04:09:43] 2025-11-29 09:09:10,080 | INFO     | job 6899596286 has completed (purged errors)
[2025-11-29 04:09:43] 2025-11-29 09:09:10,080 | INFO     | overall cleanup function is called
[2025-11-29 04:09:43] 2025-11-29 09:09:11,110 | INFO     | --- collectZombieJob: --- 10, [1741870]
[2025-11-29 04:09:43] 2025-11-29 09:09:11,110 | INFO     | zombie collector waiting for pid 1741870
[2025-11-29 04:09:43] 2025-11-29 09:09:11,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 04:09:43] 2025-11-29 09:09:11,110 | INFO     | collected zombie processes
[2025-11-29 04:09:43] 2025-11-29 09:09:11,110 | INFO     | will attempt to kill all subprocesses of pid=1741870
[2025-11-29 04:09:43] 2025-11-29 09:09:11,378 | INFO     | process IDs to be killed: [1741870] (in reverse order)
[2025-11-29 04:09:43] 2025-11-29 09:09:11,461 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 04:09:43] 2025-11-29 09:09:11,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 04:09:43] 2025-11-29 09:09:11,470 | INFO     | did not find any defunct processes belonging to 1741870
[2025-11-29 04:09:43] 2025-11-29 09:09:11,479 | INFO     | did not find any defunct processes belonging to 1741870
[2025-11-29 04:09:43] 2025-11-29 09:09:11,481 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 04:09:43] 2025-11-29 09:09:11,481 | INFO     | ready for new job
[2025-11-29 04:09:43] 2025-11-29 09:09:11,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 04:09:43] 2025-11-29 09:09:11,488 | INFO     | ***************************************
[2025-11-29 04:09:43] 2025-11-29 09:09:11,489 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 04:09:43] 2025-11-29 09:09:11,489 | INFO     | ***************************************
[2025-11-29 04:09:43] 2025-11-29 09:09:11,489 | INFO     | 
[2025-11-29 04:09:43] 2025-11-29 09:09:11,491 | INFO     | architecture information:
[2025-11-29 04:09:43] 2025-11-29 09:09:11,491 | INFO     | executing command: cat /etc/os-release
[2025-11-29 04:09:43] 2025-11-29 09:09:11,506 | INFO     | cat /etc/os-release:
[2025-11-29 04:09:43] NAME="CentOS Linux"
[2025-11-29 04:09:43] VERSION="7 (Core)"
[2025-11-29 04:09:43] ID="centos"
[2025-11-29 04:09:43] ID_LIKE="rhel fedora"
[2025-11-29 04:09:43] VERSION_ID="7"
[2025-11-29 04:09:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 04:09:43] ANSI_COLOR="0;31"
[2025-11-29 04:09:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 04:09:43] HOME_URL="https://www.centos.org/"
[2025-11-29 04:09:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 04:09:43] 
[2025-11-29 04:09:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 04:09:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 04:09:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 04:09:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 04:09:43] 
[2025-11-29 04:09:43] 2025-11-29 09:09:11,506 | INFO     | ***************************************
[2025-11-29 04:09:43] 2025-11-29 09:09:12,010 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-29 04:09:43] 2025-11-29 09:09:12,128 | INFO     | sufficient remaining disk space (49042948096 B)
[2025-11-29 04:09:43] 2025-11-29 09:09:12,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 04:09:43] 2025-11-29 09:09:12,129 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 04:09:43] 2025-11-29 09:09:12,129 | INFO     | update_server=False
[2025-11-29 04:09:43] 2025-11-29 09:09:12,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 04:09:43] 2025-11-29 09:09:12,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 04:09:43] 2025-11-29 09:09:12,546 | INFO     | all data control threads have been joined
[2025-11-29 04:09:43] 2025-11-29 09:09:12,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 04:09:43] 2025-11-29 09:09:12,717 | INFO     | aborting loop
[2025-11-29 04:09:43] 2025-11-29 09:09:12,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 04:09:43] 2025-11-29 09:09:13,137 | INFO     | [job] retrieve thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,160 | INFO     | all job control threads have been joined
[2025-11-29 04:09:43] 2025-11-29 09:09:13,160 | INFO     | all payload control threads have been joined
[2025-11-29 04:09:43] 2025-11-29 09:09:13,244 | INFO     | [data] copytool_in thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,306 | INFO     | [job] validate thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,335 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,360 | INFO     | [payload] validate_post thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,525 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,564 | INFO     | [data] control thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,596 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,722 | INFO     | [job] job monitor thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:13,787 | INFO     | [payload] failed_post thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:14,139 | INFO     | [data] copytool_out thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:14,167 | INFO     | [job] control thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:14,175 | INFO     | [payload] control thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:15,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 04:09:43] 2025-11-29 09:09:16,042 | INFO     | [job] queue monitor thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:16,914 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 04:09:43] 2025-11-29 09:09:20,669 | INFO     | [monitor] cgroup control has ended
[2025-11-29 04:09:43] 2025-11-29 09:09:21,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831707858752)>', '<ExcThread(monitor, started 139830914709248)>']
[2025-11-29 04:09:43] 2025-11-29 09:09:26,298 | INFO     | all workflow threads have been joined
[2025-11-29 04:09:43] 2025-11-29 09:09:26,298 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 04:09:43] 2025-11-29 09:09:26,304 | INFO     | traces error code: 0
[2025-11-29 04:09:43] 2025-11-29 09:09:26,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 04:09:43] 2025-11-29 09:09:35,591 [wrapper] supervise_pilot (15 min periods counter: 104)
[2025-11-29 04:09:43] 2025-11-29 09:09:43,027 | INFO     | PID=1729812 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 04:09:43] 2025-11-29 09:09:43,028 | INFO     | .. there are 9 such processes running
[2025-11-29 04:09:43] 2025-11-29 09:09:43,028 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 04:09:43] 2025-11-29 09:09:43,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 04:09:43] 2025-11-29 09:09:43,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 04:09:43] 2025-11-29 09:09:43,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 04:09:43] 2025-11-29 09:09:43,028 | INFO     | [monitor] control thread has ended
[2025-11-29 04:09:43] 2025-11-29 09:09:43,140 [wrapper] ==== pilot stdout END ====
[2025-11-29 04:09:43] 2025-11-29 09:09:43,142 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 04:09:43] 2025-11-29 09:09:43,144 [wrapper] pilotpid: 1729812
[2025-11-29 04:09:43] 2025-11-29 09:09:43,146 [wrapper] Pilot exit status: 0
[2025-11-29 04:09:43] 2025-11-29 09:09:43,157 [wrapper] pandaids: 6899596286
[2025-11-29 04:09:43] 2025-11-29 09:09:43,207 [wrapper] cleanup supervisor_pilot 3996917 1729813
[2025-11-29 04:09:43] 2025-11-29 09:09:43,210 [wrapper] Test setup, not cleaning
[2025-11-29 04:09:43] 2025-11-29 09:09:43,212 [wrapper] apfmon messages muted
[2025-11-29 04:09:43] 2025-11-29 09:09:43,215 [wrapper] ==== wrapper stdout END ====
[2025-11-29 04:09:43] 2025-11-29 09:09:43,217 [wrapper] ==== wrapper stderr END ====
[2025-11-29 04:09:43]  *** Error codes and diagnostics ***
[2025-11-29 04:09:43]     "exeErrorCode": 0,
[2025-11-29 04:09:43]     "exeErrorDiag": "",
[2025-11-29 04:09:43]     "pilotErrorCode": 0,
[2025-11-29 04:09:43]     "pilotErrorDiag": "",
[2025-11-29 04:09:43]  *** Listing of results directory ***
[2025-11-29 04:09:43] total 1314984
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 27 03:46 queuedata.json
[2025-11-29 04:09:43] -rwx------. 1 boincer umatlas     36292 Nov 27 03:46 runpilot2-wrapper.sh
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas       100 Nov 28 02:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 04:09:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 28 02:22 run_atlas
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas       105 Nov 28 02:22 job.xml
[2025-11-29 04:09:43] -rw-r--r--. 2 boincer umatlas 410783566 Nov 28 02:22 EVNT.47483658._003407.pool.root.1
[2025-11-29 04:09:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 02:22 start_atlas.sh
[2025-11-29 04:09:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 28 02:22 shared
[2025-11-29 04:09:43] -rw-r--r--. 2 boincer umatlas    590107 Nov 28 02:22 input.tar.gz
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas         0 Nov 28 02:22 boinc_lockfile
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas      2787 Nov 28 02:23 pandaJob.out
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas        57 Nov 28 02:23 setup.sh.local
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas    991866 Nov 28 02:24 agis_schedconf.cvmfs.json
[2025-11-29 04:09:43] drwx------. 5 boincer umatlas      4096 Nov 28 02:24 pilot3
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas       533 Nov 29 03:36 boinc_task_state.xml
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas      6662 Nov 29 04:03 init_data.xml
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas 901633524 Nov 29 04:08 HITS.47556173._003632.pool.root.1
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas      1057 Nov 29 04:08 memory_monitor_summary.json
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas   1516240 Nov 29 04:08 agis_ddmendpoints.agis.ALL.json
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas   2580864 Nov 29 04:08 log.47556173._003632.job.log.tgz.1
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas        95 Nov 29 04:09 pilot_heartbeat.json
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas      8618 Nov 29 04:09 heartbeat.json
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas        29 Nov 29 04:09 wrapper_checkpoint.txt
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 29 04:09 boinc_mmap_file
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas       822 Nov 29 04:09 pilotlog.txt
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas  12519203 Nov 29 04:09 log.47556173._003632.job.log.1
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas       353 Nov 29 04:09 output.list
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas       620 Nov 29 04:09 runtime_log
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas  15124480 Nov 29 04:09 result.tar.gz
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas      9343 Nov 29 04:09 runtime_log.err
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas       660 Nov 29 04:09 lhfMDmLpmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4ZKKDmNjddDo.diag
[2025-11-29 04:09:43] -rw-r--r--. 1 boincer umatlas     21743 Nov 29 04:09 stderr.txt
[2025-11-29 04:09:43] HITS file was successfully produced:
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas 901633524 Nov 29 04:08 shared/HITS.pool.root.1
[2025-11-29 04:09:43]  *** Contents of shared directory: ***
[2025-11-29 04:09:43] total 1297036
[2025-11-29 04:09:43] -rw-r--r--. 2 boincer umatlas 410783566 Nov 28 02:22 ATLAS.root_0
[2025-11-29 04:09:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 02:22 start_atlas.sh
[2025-11-29 04:09:43] -rw-r--r--. 2 boincer umatlas    590107 Nov 28 02:22 input.tar.gz
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas 901633524 Nov 29 04:08 HITS.pool.root.1
[2025-11-29 04:09:43] -rw-------. 1 boincer umatlas  15124480 Nov 29 04:09 result.tar.gz
04:09:44 (1725694): run_atlas exited; CPU time 300830.977945
04:09:44 (1725694): called boinc_finish(0)

</stderr_txt>
]]>

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