Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:50:58 (3624174): wrapper (7.7.26015): starting
19:50:58 (3624174): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 19:50:58] Arguments: --nthreads 8
[2025-11-27 19:50:58] Threads: 8
[2025-11-27 19:50:58] Checking for CVMFS
[2025-11-27 19:50:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 19:50:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 19:50:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 19:51:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 19:51:00] 2.13.3.0 15551 30531 342268 153391 0 367 31060202 32935937 24958 16776704 0 63338237 99.551 78089190 40607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 19:51:00] CVMFS is ok
[2025-11-27 19:51:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 19:51:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 19:51:00] Further information can be found at the LHC@home message board.
[2025-11-27 19:51:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 19:51:00] Checking for apptainer binary...
[2025-11-27 19:51:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 19:51:00] Running /usr/bin/apptainer --version
[2025-11-27 19:51:00] apptainer version 1.4.4-1.el9
[2025-11-27 19:51:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 19:51:00] c6-5-7-3.aglt2.org
[2025-11-27 19:51:00] apptainer works
[2025-11-27 19:51:00] Set ATHENA_PROC_NUMBER=8
[2025-11-27 19:51:00] Set ATHENA_CORE_NUMBER=8
[2025-11-27 19:51:00] Starting ATLAS job with PandaID=6899576225
[2025-11-27 19:51:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 13:46:00]  *** The last 200 lines of the pilot log: ***
[2025-11-28 13:46:00] 2025-11-28 18:40:40,198 | INFO     | fitting pss+swap vs Time
[2025-11-28 13:46:00] 2025-11-28 18:40:40,201 | INFO     | sum of square deviations: 360141959271.48364
[2025-11-28 13:46:00] 2025-11-28 18:40:40,268 | INFO     | sum of deviations: 2377017007150.879
[2025-11-28 13:46:00] 2025-11-28 18:40:40,269 | INFO     | mean x: 1764323164.2359657
[2025-11-28 13:46:00] 2025-11-28 18:40:40,269 | INFO     | mean y: 2949019.7545195054
[2025-11-28 13:46:00] 2025-11-28 18:40:40,269 | INFO     | intersect: -11641976153.592852
[2025-11-28 13:46:00] 2025-11-28 18:40:40,286 | INFO     | chi2: 8.00240080519489
[2025-11-28 13:46:00] 2025-11-28 18:40:40,288 | INFO     | sum of square deviations: 355031228718.20337
[2025-11-28 13:46:00] 2025-11-28 18:40:40,458 | INFO     | sum of deviations: 2731351444025.829
[2025-11-28 13:46:00] 2025-11-28 18:40:40,458 | INFO     | mean x: 1764323011.7753346
[2025-11-28 13:46:00] 2025-11-28 18:40:40,458 | INFO     | mean y: 2959588.326959847
[2025-11-28 13:46:00] 2025-11-28 18:40:40,459 | INFO     | intersect: -13570455413.33055
[2025-11-28 13:46:00] 2025-11-28 18:40:40,460 | INFO     | chi2: 4.950650563818135
[2025-11-28 13:46:00] 2025-11-28 18:40:40,460 | INFO     | current chi2=4.950650563818135 (change=38.13543354883776 %)
[2025-11-28 13:46:00] 2025-11-28 18:40:40,464 | INFO     | sum of square deviations: 349969150236.6535
[2025-11-28 13:46:00] 2025-11-28 18:40:40,529 | INFO     | sum of deviations: 2968196015407.245
[2025-11-28 13:46:00] 2025-11-28 18:40:40,529 | INFO     | mean x: 1764322859.3150816
[2025-11-28 13:46:00] 2025-11-28 18:40:40,529 | INFO     | mean y: 2966713.1882804995
[2025-11-28 13:46:00] 2025-11-28 18:40:40,529 | INFO     | intersect: -14960798171.144281
[2025-11-28 13:46:00] 2025-11-28 18:40:40,533 | INFO     | chi2: 3.2343945564448258
[2025-11-28 13:46:00] 2025-11-28 18:40:40,533 | INFO     | current chi2=3.2343945564448258 (change=34.66728231470382 %)
[2025-11-28 13:46:00] 2025-11-28 18:40:40,534 | INFO     | sum of square deviations: 344954287293.4318
[2025-11-28 13:46:00] 2025-11-28 18:40:40,582 | INFO     | sum of deviations: 2952478749487.357
[2025-11-28 13:46:00] 2025-11-28 18:40:40,582 | INFO     | mean x: 1764322706.8368726
[2025-11-28 13:46:00] 2025-11-28 18:40:40,582 | INFO     | mean y: 2966233.493243243
[2025-11-28 13:46:00] 2025-11-28 18:40:40,582 | INFO     | intersect: -15097948557.40712
[2025-11-28 13:46:00] 2025-11-28 18:40:40,583 | INFO     | chi2: 3.211452324917408
[2025-11-28 13:46:00] 2025-11-28 18:40:40,583 | INFO     | current chi2=3.211452324917408 (change=0.7093207438685306 %)
[2025-11-28 13:46:00] 2025-11-28 18:40:40,583 | INFO     | right removable region: 1035
[2025-11-28 13:46:00] 2025-11-28 18:40:40,585 | INFO     | sum of square deviations: 355025948558.2034
[2025-11-28 13:46:00] 2025-11-28 18:40:40,682 | INFO     | sum of deviations: 2015130527405.6897
[2025-11-28 13:46:00] 2025-11-28 18:40:40,682 | INFO     | mean x: 1764323316.7753346
[2025-11-28 13:46:00] 2025-11-28 18:40:40,705 | INFO     | mean y: 2959803.6625239006
[2025-11-28 13:46:00] 2025-11-28 18:40:40,705 | INFO     | intersect: -10011355460.577291
[2025-11-28 13:46:00] 2025-11-28 18:40:40,707 | INFO     | chi2: 5.06228893941241
[2025-11-28 13:46:00] 2025-11-28 18:40:40,707 | INFO     | current chi2=5.06228893941241 (change=36.740372512632185 %)
[2025-11-28 13:46:00] 2025-11-28 18:40:40,733 | INFO     | sum of square deviations: 349958909024.7797
[2025-11-28 13:46:00] 2025-11-28 18:40:40,819 | INFO     | sum of deviations: 1926861224003.0823
[2025-11-28 13:46:00] 2025-11-28 18:40:40,820 | INFO     | mean x: 1764323469.3102787
[2025-11-28 13:46:00] 2025-11-28 18:40:40,820 | INFO     | mean y: 2962460.1700288183
[2025-11-28 13:46:00] 2025-11-28 18:40:40,820 | INFO     | intersect: -9711339396.256922
[2025-11-28 13:46:00] 2025-11-28 18:40:40,821 | INFO     | chi2: 4.98122380382002
[2025-11-28 13:46:00] 2025-11-28 18:40:40,821 | INFO     | current chi2=4.98122380382002 (change=1.6013533909780913 %)
[2025-11-28 13:46:00] 2025-11-28 18:40:40,821 | INFO     | left removable region: 20
[2025-11-28 13:46:00] 2025-11-28 18:40:40,844 | INFO     | sum of square deviations: 324400693009.54315
[2025-11-28 13:46:00] 2025-11-28 18:40:40,918 | INFO     | sum of deviations: 2381861560584.8857
[2025-11-28 13:46:00] 2025-11-28 18:40:40,918 | INFO     | mean x: 1764323286.4857142
[2025-11-28 13:46:00] 2025-11-28 18:40:40,918 | INFO     | mean y: 2983461.1990147782
[2025-11-28 13:46:00] 2025-11-28 18:40:40,918 | INFO     | intersect: -12951285463.255758
[2025-11-28 13:46:00] 2025-11-28 18:40:40,919 | INFO     | chi2: 0.12158107075015001
[2025-11-28 13:46:00] 2025-11-28 18:40:40,920 | INFO     | current memory leak: 7.34 B/s (using 1015 data points, chi2=0.12)
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | could have reported an average CPU frequency of 3017 MHz (38 samples)
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | ..............................
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | . Timing measurements:
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | . get job = 0 s
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | . initial setup = 3 s
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | . payload setup = 15 s
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | . stage-in = 0 s
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | . payload execution = 64077 s
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | . stage-out = 6 s
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | . log creation = 1 s
[2025-11-28 13:46:00] 2025-11-28 18:40:40,921 | INFO     | ..............................
[2025-11-28 13:46:00] 2025-11-28 18:40:41,009 | INFO     | 
[2025-11-28 13:46:00] 2025-11-28 18:40:41,009 | INFO     | job summary report
[2025-11-28 13:46:00] 2025-11-28 18:40:41,009 | INFO     | --------------------------------------------------
[2025-11-28 13:46:00] 2025-11-28 18:40:41,009 | INFO     | PanDA job id: 6899576225
[2025-11-28 13:46:00] 2025-11-28 18:40:41,009 | INFO     | task id: 47556173
[2025-11-28 13:46:00] 2025-11-28 18:40:41,009 | INFO     | errors: (none)
[2025-11-28 13:46:00] 2025-11-28 18:40:41,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 13:46:00] 2025-11-28 18:40:41,009 | INFO     | pilot state: finished 
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | transexitcode: 0
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | exeerrorcode: 0
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | exeerrordiag: 
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | exitcode: 0
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | exitmsg: OK
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | cpuconsumptiontime: 226461 s
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | nevents: 1000
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | neventsw: 0
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | pid: 3634862
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | pgrp: 3634862
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | corecount: 8
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | event service: False
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | sizes: {0: 2284316, 1: 2284316, 11: 2284634, 64097: 2338656, 64098: 2338655, 64105: 2347705, 64107: 2347889, 64137: 2348135}
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | --------------------------------------------------
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | 
[2025-11-28 13:46:00] 2025-11-28 18:40:41,010 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-28 13:46:00] 2025-11-28 18:40:41,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 13:46:00] 2025-11-28 18:40:41,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 13:46:00] 2025-11-28 18:40:41,129 | INFO     | job 6899576225 has completed (purged errors)
[2025-11-28 13:46:00] 2025-11-28 18:40:41,129 | INFO     | overall cleanup function is called
[2025-11-28 13:46:00] 2025-11-28 18:40:42,146 | INFO     | --- collectZombieJob: --- 10, [3634862]
[2025-11-28 13:46:00] 2025-11-28 18:40:42,146 | INFO     | zombie collector waiting for pid 3634862
[2025-11-28 13:46:00] 2025-11-28 18:40:42,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 13:46:00] 2025-11-28 18:40:42,146 | INFO     | collected zombie processes
[2025-11-28 13:46:00] 2025-11-28 18:40:42,147 | INFO     | will attempt to kill all subprocesses of pid=3634862
[2025-11-28 13:46:00] 2025-11-28 18:40:43,195 | INFO     | process IDs to be killed: [3634862] (in reverse order)
[2025-11-28 13:46:00] 2025-11-28 18:40:43,402 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 13:46:00] 2025-11-28 18:40:43,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 13:46:00] 2025-11-28 18:40:43,420 | INFO     | did not find any defunct processes belonging to 3634862
[2025-11-28 13:46:00] 2025-11-28 18:40:43,440 | INFO     | did not find any defunct processes belonging to 3634862
[2025-11-28 13:46:00] 2025-11-28 18:40:43,447 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 13:46:00] 2025-11-28 18:40:43,448 | INFO     | ready for new job
[2025-11-28 13:46:00] 2025-11-28 18:40:43,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 13:46:00] 2025-11-28 18:40:43,459 | INFO     | ***************************************
[2025-11-28 13:46:00] 2025-11-28 18:40:43,459 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 13:46:00] 2025-11-28 18:40:43,459 | INFO     | ***************************************
[2025-11-28 13:46:00] 2025-11-28 18:40:43,459 | INFO     | 
[2025-11-28 13:46:00] 2025-11-28 18:40:43,464 | INFO     | architecture information:
[2025-11-28 13:46:00] 2025-11-28 18:40:43,481 | INFO     | executing command: cat /etc/os-release
[2025-11-28 13:46:00] 2025-11-28 18:40:43,671 | INFO     | cat /etc/os-release:
[2025-11-28 13:46:00] NAME="CentOS Linux"
[2025-11-28 13:46:00] VERSION="7 (Core)"
[2025-11-28 13:46:00] ID="centos"
[2025-11-28 13:46:00] ID_LIKE="rhel fedora"
[2025-11-28 13:46:00] VERSION_ID="7"
[2025-11-28 13:46:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 13:46:00] ANSI_COLOR="0;31"
[2025-11-28 13:46:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 13:46:00] HOME_URL="https://www.centos.org/"
[2025-11-28 13:46:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 13:46:00] 
[2025-11-28 13:46:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 13:46:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 13:46:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 13:46:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 13:46:00] 
[2025-11-28 13:46:00] 2025-11-28 18:40:43,672 | INFO     | ***************************************
[2025-11-28 13:46:00] 2025-11-28 18:40:44,175 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-28 13:46:00] 2025-11-28 18:40:44,307 | INFO     | sufficient remaining disk space (70050119680 B)
[2025-11-28 13:46:00] 2025-11-28 18:40:44,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 13:46:00] 2025-11-28 18:40:44,314 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 13:46:00] 2025-11-28 18:40:44,315 | INFO     | update_server=False
[2025-11-28 13:46:00] 2025-11-28 18:40:44,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 13:46:00] 2025-11-28 18:40:44,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 13:46:00] 2025-11-28 18:40:44,338 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 13:46:00] 2025-11-28 18:40:44,338 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 13:46:00] 2025-11-28 18:40:44,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:46:00] 2025-11-28 18:40:44,339 | INFO     | will abort loop
[2025-11-28 13:46:00] 2025-11-28 18:40:44,428 | INFO     | all job control threads have been joined
[2025-11-28 13:46:00] 2025-11-28 18:40:44,766 | INFO     | all payload control threads have been joined
[2025-11-28 13:46:00] 2025-11-28 18:40:44,871 | INFO     | all data control threads have been joined
[2025-11-28 13:46:00] 2025-11-28 18:40:45,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 13:46:00] 2025-11-28 18:40:45,344 | INFO     | [job] job monitor thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:45,348 | INFO     | [job] retrieve thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:45,434 | INFO     | [job] control thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:45,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:45,764 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:45,772 | INFO     | [payload] control thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:45,877 | INFO     | [data] control thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:45,990 | INFO     | [data] copytool_in thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:45,996 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:46,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:46:00] 2025-11-28 18:40:46,029 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:46,271 | INFO     | [job] validate thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:46,636 | INFO     | [payload] validate_post thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:46,882 | INFO     | [payload] failed_post thread has finished
[2025-11-28 13:46:00] 2025-11-28 18:40:47,030 | INFO     | [job] queue monitor thread has finished
[2025-11-28 13:46:01] 2025-11-28 18:40:47,070 | INFO     | [data] copytool_out thread has finished
[2025-11-28 13:46:01] 2025-11-28 18:40:48,347 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 13:46:01] 2025-11-28 18:41:13,554 | INFO     | PID=3627873 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 13:46:01] 2025-11-28 18:41:13,554 | INFO     | .. there are 39 such processes running
[2025-11-28 13:46:01] 2025-11-28 18:41:13,556 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 13:46:01] 2025-11-28 18:41:13,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 13:46:01] 2025-11-28 18:41:13,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 13:46:01] 2025-11-28 18:41:20,231 | INFO     | [monitor] cgroup control has ended
[2025-11-28 13:46:01] 2025-11-28 18:41:20,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139688050517824)>', '<ExcThread(monitor, started 139686882301696)>']
[2025-11-28 13:46:01] 2025-11-28 18:41:20,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 13:46:01] 2025-11-28 18:41:20,612 | INFO     | [monitor] control thread has ended
[2025-11-28 13:46:01] 2025-11-28 18:41:25,534 | INFO     | all workflow threads have been joined
[2025-11-28 13:46:01] 2025-11-28 18:41:25,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 13:46:01] 2025-11-28 18:41:25,534 | INFO     | traces error code: 0
[2025-11-28 13:46:01] 2025-11-28 18:41:25,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 13:46:01] 2025-11-28 18:41:25,739 [wrapper] ==== pilot stdout END ====
[2025-11-28 13:46:01] 2025-11-28 18:41:25,771 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 13:46:01] 2025-11-28 18:41:25,789 [wrapper] pilotpid: 3627873
[2025-11-28 13:46:01] 2025-11-28 18:41:25,808 [wrapper] Pilot exit status: 0
[2025-11-28 13:46:01] 2025-11-28 18:41:25,930 [wrapper] pandaids: 6899576225
[2025-11-28 13:46:01] 2025-11-28 18:41:26,089 [wrapper] cleanup supervisor_pilot 2987297 3627874
[2025-11-28 13:46:01] 2025-11-28 18:41:26,094 [wrapper] Test setup, not cleaning
[2025-11-28 13:46:01] 2025-11-28 18:41:26,097 [wrapper] apfmon messages muted
[2025-11-28 13:46:01] 2025-11-28 18:41:26,099 [wrapper] ==== wrapper stdout END ====
[2025-11-28 13:46:01] 2025-11-28 18:41:26,102 [wrapper] ==== wrapper stderr END ====
[2025-11-28 13:46:01]  *** Error codes and diagnostics ***
[2025-11-28 13:46:01]     "exeErrorCode": 0,
[2025-11-28 13:46:01]     "exeErrorDiag": "",
[2025-11-28 13:46:01]     "pilotErrorCode": 0,
[2025-11-28 13:46:01]     "pilotErrorDiag": "",
[2025-11-28 13:46:01]  *** Listing of results directory ***
[2025-11-28 13:46:01] total 1307856
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-11-28 13:46:01] -rwx------. 1 boincer umatlas     36292 Nov 27 03:46 runpilot2-wrapper.sh
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 27 03:46 queuedata.json
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas       100 Nov 27 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 13:46:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 19:50 run_atlas
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas       105 Nov 27 19:50 job.xml
[2025-11-28 13:46:01] -rw-r--r--. 2 boincer umatlas 409797819 Nov 27 19:50 EVNT.47483658._003385.pool.root.1
[2025-11-28 13:46:01] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 19:50 input.tar.gz
[2025-11-28 13:46:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 19:50 start_atlas.sh
[2025-11-28 13:46:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 19:50 shared
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas         0 Nov 27 19:50 boinc_lockfile
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 19:51 pandaJob.out
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas        57 Nov 27 19:51 setup.sh.local
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas    991826 Nov 27 19:51 agis_schedconf.cvmfs.json
[2025-11-28 13:46:01] drwx------. 5 boincer umatlas      4096 Nov 27 19:51 pilot3
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas       533 Nov 28 13:28 boinc_task_state.xml
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas 905565057 Nov 28 13:39 HITS.47556173._003413.pool.root.1
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas      1057 Nov 28 13:39 memory_monitor_summary.json
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas   1516240 Nov 28 13:40 agis_ddmendpoints.agis.ALL.json
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas   2150504 Nov 28 13:40 log.47556173._003413.job.log.tgz.1
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas      8618 Nov 28 13:40 heartbeat.json
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas        95 Nov 28 13:41 pilot_heartbeat.json
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas      5010 Nov 28 13:41 pilotlog.txt
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas   7828463 Nov 28 13:41 log.47556173._003413.job.log.1
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas       353 Nov 28 13:41 output.list
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas       620 Nov 28 13:41 runtime_log
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas   9994240 Nov 28 13:41 result.tar.gz
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas      9343 Nov 28 13:41 runtime_log.err
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas       660 Nov 28 13:41 lpeKDmEpmi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhlNKDmqKTKfn.diag
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas        29 Nov 28 13:45 wrapper_checkpoint.txt
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas      6845 Nov 28 13:46 init_data.xml
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 13:46 boinc_mmap_file
[2025-11-28 13:46:01] -rw-r--r--. 1 boincer umatlas     21159 Nov 28 13:46 stderr.txt
[2025-11-28 13:46:01] HITS file was successfully produced:
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas 905565057 Nov 28 13:39 shared/HITS.pool.root.1
[2025-11-28 13:46:01]  *** Contents of shared directory: ***
[2025-11-28 13:46:01] total 1294904
[2025-11-28 13:46:01] -rw-r--r--. 2 boincer umatlas 409797819 Nov 27 19:50 ATLAS.root_0
[2025-11-28 13:46:01] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 19:50 input.tar.gz
[2025-11-28 13:46:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 19:50 start_atlas.sh
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas 905565057 Nov 28 13:39 HITS.pool.root.1
[2025-11-28 13:46:01] -rw-------. 1 boincer umatlas   9994240 Nov 28 13:41 result.tar.gz
13:46:03 (3624174): run_atlas exited; CPU time 227906.276109
13:46:03 (3624174): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN