Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 19:28:28 (30296): vboxwrapper version 26210
2025-11-27 19:28:28 (30296): BOINC client version: 8.3.0
2025-11-27 19:28:28 (30296): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-11-27 19:28:28 (30296): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 19:28:28 (30296): Create VM. (boinc_e3695ba47bc4d698, slot#2)
2025-11-27 19:28:28 (30296): Setting Memory Size for VM. (4300MB)
2025-11-27 19:28:28 (30296): Setting CPU Count for VM. (3)
2025-11-27 19:28:28 (30296): Setting Chipset Options for VM.
2025-11-27 19:28:28 (30296): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 19:28:28 (30296): Setting Boot Options for VM.
2025-11-27 19:28:28 (30296): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 19:28:28 (30296): Enabling VM Network Access.
2025-11-27 19:28:28 (30296): Disabling USB Support for VM.
2025-11-27 19:28:28 (30296): Disabling COM Port Support for VM.
2025-11-27 19:28:28 (30296): Disabling LPT Port Support for VM.
2025-11-27 19:28:28 (30296): Disabling Audio Support for VM.
2025-11-27 19:28:28 (30296): Disabling Clipboard Support for VM.
2025-11-27 19:28:28 (30296): Disabling Drag and Drop Support for VM.
2025-11-27 19:28:28 (30296): Adding storage controller(s) to VM.
2025-11-27 19:28:28 (30296): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 19:28:28 (30296): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 19:28:28 (30296): forwarding host port 51559 to guest port 80
2025-11-27 19:28:28 (30296): Enabling remote desktop for VM.
2025-11-27 19:28:28 (30296): Enabling shared directory for VM.
2025-11-27 19:28:28 (30296): Starting VM using VBoxManage interface. (boinc_e3695ba47bc4d698, slot#2)
2025-11-27 19:28:29 (30296): Successfully started VM. (PID = '30733')
2025-11-27 19:28:29 (30296): Reporting VM Process ID to BOINC.
2025-11-27 19:28:29 (30296): Guest Log: BIOS: VirtualBox 7.2.2
2025-11-27 19:28:29 (30296): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 19:28:29 (30296): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 19:28:29 (30296): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 19:28:29 (30296): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 19:28:29 (30296): Detected: Web Application Enabled (http://localhost:51559)
2025-11-27 19:28:29 (30296): Detected: Remote Desktop Enabled (localhost:33043)
2025-11-27 19:28:29 (30296): Preference change detected
2025-11-27 19:28:29 (30296): Setting CPU throttle for VM. (100%)
2025-11-27 19:28:30 (30296): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 19:28:31 (30296): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 19:28:31 (30296): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 19:28:34 (30296): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 19:28:34 (30296): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 19:28:34 (30296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 19:28:42 (30296): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 19:28:42 (30296): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 19:28:45 (30296): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 19:28:45 (30296): Guest Log: 00:00:00.000116 main     Log opened 2025-11-28T00:28:44.415997000Z
2025-11-27 19:28:45 (30296): Guest Log: 00:00:00.000185 main     OS Product: Linux
2025-11-27 19:28:45 (30296): Guest Log: 00:00:00.000208 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 19:28:45 (30296): Guest Log: 00:00:00.000224 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 19:28:45 (30296): Guest Log: 00:00:00.000240 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 19:28:45 (30296): Guest Log: 00:00:00.000241 main     Process ID: 1281
2025-11-27 19:28:45 (30296): Guest Log: 00:00:00.000241 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 19:28:45 (30296): Guest Log: 00:00:00.000766 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 19:28:46 (30296): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 19:28:46 (30296): Guest Log: [INFO] Mounting shared directory
2025-11-27 19:28:46 (30296): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 19:28:59 (30296): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 19:28:59 (30296): Guest Log: [INFO] Detected branch: prod
2025-11-27 19:29:00 (30296): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 19:29:00 (30296): Guest Log: Copying input files
2025-11-27 19:29:01 (30296): Guest Log: Copied input files into RunAtlas.
2025-11-27 19:29:01 (30296): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 19:29:01 (30296): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 19:29:01 (30296): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 19:29:01 (30296): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 19:29:21 (30296): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 19:29:22 (30296): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 19:29:22 (30296): Guest Log: 2.6.3.0 1562 0 30152 153391 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 19:29:22 (30296): Guest Log: copied the webapp to /var/www
2025-11-27 19:29:22 (30296): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-27 19:29:22 (30296): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-27 19:29:22 (30296): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 19:29:22 (30296): Guest Log:  *** Starting ATLAS job. (PandaID=6899498266 taskID=47556173) ***
2025-11-27 21:07:30 (30296): Status Report: Elapsed Time: '6000.000000'
2025-11-27 21:07:30 (30296): Status Report: CPU Time: '16820.300000'
2025-11-27 22:46:30 (30296): Status Report: Elapsed Time: '12000.000000'
2025-11-27 22:46:30 (30296): Status Report: CPU Time: '34597.960000'
2025-11-28 00:25:31 (30296): Status Report: Elapsed Time: '18000.000000'
2025-11-28 00:25:31 (30296): Status Report: CPU Time: '52379.950000'
2025-11-28 02:04:31 (30296): Status Report: Elapsed Time: '24000.000000'
2025-11-28 02:04:31 (30296): Status Report: CPU Time: '70165.030000'
2025-11-28 03:43:31 (30296): Status Report: Elapsed Time: '30000.000000'
2025-11-28 03:43:31 (30296): Status Report: CPU Time: '87949.750000'
2025-11-28 05:22:32 (30296): Status Report: Elapsed Time: '36000.000000'
2025-11-28 05:22:32 (30296): Status Report: CPU Time: '105736.120000'
2025-11-28 06:08:29 (30296): Guest Log:  *** Job finished ***
2025-11-28 06:08:29 (30296): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:23,145 | INFO     | all workflow threads have been joined
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:23,145 | INFO     | end of generic workflow (traces error code: 0)
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:23,145 | INFO     | traces error code: 0
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:23,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,218 | INFO     | PID=5966 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,219 | INFO     | found 0 job(s) in 20 queues
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,219 | INFO     | [monitor] control thread has ended
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,280 [wrapper] ==== pilot stdout END ====
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,284 [wrapper] ==== wrapper stdout RESUME ====
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,287 [wrapper] pilotpid: 5966
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,291 [wrapper] Pilot exit status: 0
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,304 [wrapper] pandaids: 6899498266
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,325 [wrapper] cleanup supervisor_pilot 20471 5967
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,329 [wrapper] Test setup, not cleaning
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,333 [wrapper] apfmon messages muted
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,337 [wrapper] ==== wrapper stdout END ====
2025-11-28 06:08:29 (30296): Guest Log: 2025-11-28 11:08:27,341 [wrapper] ==== wrapper stderr END ====
2025-11-28 06:08:29 (30296): Guest Log:  *** Error codes and diagnostics ***
2025-11-28 06:08:29 (30296): Guest Log:     "exeErrorCode": 0,
2025-11-28 06:08:29 (30296): Guest Log:     "exeErrorDiag": "",
2025-11-28 06:08:29 (30296): Guest Log:     "pilotErrorCode": 0,
2025-11-28 06:08:29 (30296): Guest Log:     "pilotErrorDiag": "",
2025-11-28 06:08:29 (30296): Guest Log:  *** Listing of results directory ***
2025-11-28 06:08:29 (30296): Guest Log: total 903436
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 27 08:46 pilot3.tar.gz
2025-11-28 06:08:29 (30296): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 27 08:46 runpilot2-wrapper.sh
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 27 08:46 queuedata.json
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 atlas atlas    590103 Nov 28 00:28 input.tar.gz
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 28 00:28 start_atlas.sh
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 atlas atlas      9578 Nov 28 00:28 init_data.xml
2025-11-28 06:08:29 (30296): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 28 00:28 EVNT.47483658._003352.pool.root.1 -> /data/./ATLAS.root_0
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 atlas atlas      2787 Nov 28 00:29 pandaJob.out
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas    991826 Nov 28 00:30 agis_schedconf.cvmfs.json
2025-11-28 06:08:29 (30296): Guest Log: drwx------. 5 atlas atlas      4096 Nov 28 00:30 pilot3
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas 908783187 Nov 28 11:07 HITS.47556173._003089.pool.root.1
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas      1039 Nov 28 11:07 memory_monitor_summary.json
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 28 11:07 agis_ddmendpoints.agis.ALL.json
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas   1272299 Nov 28 11:07 log.47556173._003089.job.log.tgz.1
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas        95 Nov 28 11:07 pilot_heartbeat.json
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas      8653 Nov 28 11:07 heartbeat.json
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas       744 Nov 28 11:08 pilotlog.txt
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas   4976447 Nov 28 11:08 log.47556173._003089.job.log.1
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas       353 Nov 28 11:08 output.list
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 28 11:08 runtime_log
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas   6266880 Nov 28 11:08 result.tar.gz
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 atlas atlas      8741 Nov 28 11:08 runtime_log.err
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas       659 Nov 28 11:08 nflMDm3omi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBkNKDmtuYjKm.diag
2025-11-28 06:08:29 (30296): Guest Log: Looking for outputfile HITS.47556173._003089.pool.root.1
2025-11-28 06:08:29 (30296): Guest Log: HITS file was successfully produced
2025-11-28 06:08:29 (30296): Guest Log: -rw-------. 1 atlas atlas 908783187 Nov 28 11:07 /home/atlas/RunAtlas/HITS.47556173._003089.pool.root.1
2025-11-28 06:08:29 (30296): Guest Log: Successfully finished the ATLAS job!
2025-11-28 06:08:29 (30296): Guest Log: Copying the results back to the shared directory!
2025-11-28 06:08:29 (30296): Guest Log:  *** Contents of shared directory: ***
2025-11-28 06:08:29 (30296): Guest Log: total 406392
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 root root 409251882 Nov 28 00:28 ATLAS.root_0
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 root root      9578 Nov 28 00:28 init_data.xml
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 root root    590103 Nov 28 00:28 input.tar.gz
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 root root   6266880 Nov 28 11:08 result.tar.gz
2025-11-28 06:08:29 (30296): Guest Log: -rw-r--r--. 1 root root     15847 Nov 28 00:28 start_atlas.sh
2025-11-28 06:08:29 (30296): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-28 06:08:29 (30296): VM Completion File Detected.
2025-11-28 06:08:29 (30296): Powering off VM.
2025-11-28 06:08:30 (30296): Successfully stopped VM.
2025-11-28 06:08:30 (30296): Deregistering VM. (boinc_e3695ba47bc4d698, slot#2)
2025-11-28 06:08:30 (30296): Removing network bandwidth throttle group from VM.
2025-11-28 06:08:30 (30296): Removing VM from VirtualBox.
2025-11-28 06:08:35 (30296): called boinc_finish(0)

</stderr_txt>
]]>

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