Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:36:15 (3581): wrapper (7.7.26015): starting
00:36:15 (3581): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 00:36:15] Arguments: --nthreads 8
[2025-11-30 00:36:15] Threads: 8
[2025-11-30 00:36:15] Checking for CVMFS
[2025-11-30 00:36:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 00:36:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 00:36:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 00:36:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 00:36:18] 2.11.2.0 20077 290362 139592 153461 1 85 24816248 25165824 2504 130560 10 138899500 99.874 78660437 2610 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-30 00:36:18] CVMFS is ok
[2025-11-30 00:36:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 00:36:18] Checking for apptainer binary...
[2025-11-30 00:36:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 00:36:18] Running /usr/bin/apptainer --version
[2025-11-30 00:36:18] apptainer version 1.3.2-1.el7
[2025-11-30 00:36:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 00:36:25] cg-vwn315.simple-grid.lan
[2025-11-30 00:36:25] apptainer works
[2025-11-30 00:36:25] Set ATHENA_PROC_NUMBER=8
[2025-11-30 00:36:25] Set ATHENA_CORE_NUMBER=8
[2025-11-30 00:36:25] Starting ATLAS job with PandaID=6899500577
[2025-11-30 00:36:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 00:12:59]  *** The last 200 lines of the pilot log: ***
[2025-12-01 00:12:59] 2025-11-30 23:12:14,086 | INFO     | time since job start (84722s) is within the limit (172800.0s)
[2025-12-01 00:12:59] 2025-11-30 23:12:14,247 | INFO     | monitor loop #5685: job 0:6899500577 is in state 'finished'
[2025-12-01 00:12:59] 2025-11-30 23:12:14,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 00:12:59] 2025-11-30 23:12:16,093 | INFO     | time since job start (84724s) is within the limit (172800.0s)
[2025-12-01 00:12:59] 2025-11-30 23:12:16,755 | INFO     | monitor loop #5686: job 0:6899500577 is in state 'finished'
[2025-12-01 00:12:59] 2025-11-30 23:12:16,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 00:12:59] 2025-11-30 23:12:17,318 | INFO     | PID=7440 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-01 00:12:59] 2025-11-30 23:12:17,319 | INFO     | .. there are 9 such processes running
[2025-12-01 00:12:59] 2025-11-30 23:12:18,325 | INFO     | time since job start (84726s) is within the limit (172800.0s)
[2025-12-01 00:12:59] 2025-11-30 23:12:19,260 | INFO     | monitor loop #5687: job 0:6899500577 is in state 'finished'
[2025-12-01 00:12:59] 2025-11-30 23:12:19,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 00:12:59] 2025-11-30 23:12:20,334 | INFO     | time since job start (84728s) is within the limit (172800.0s)
[2025-12-01 00:12:59] 2025-11-30 23:12:21,765 | INFO     | monitor loop #5688: job 0:6899500577 is in state 'finished'
[2025-12-01 00:12:59] 2025-11-30 23:12:21,765 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 00:12:59] 2025-11-30 23:12:22,341 | INFO     | time since job start (84730s) is within the limit (172800.0s)
[2025-12-01 00:12:59] 2025-11-30 23:12:23,279 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-01 00:12:59] 2025-11-30 23:12:23,280 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-01 00:12:59] 2025-11-30 23:12:23,282 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6899500577/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 00:12:59] 2025-11-30 23:12:23,282 | INFO     | extracted standard info from prmon json
[2025-12-01 00:12:59] 2025-11-30 23:12:23,282 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 00:12:59] 2025-11-30 23:12:23,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 00:12:59] 2025-11-30 23:12:23,311 | INFO     | fitting pss+swap vs Time
[2025-12-01 00:12:59] 2025-11-30 23:12:23,313 | INFO     | sum of square deviations: 814920553252.2582
[2025-12-01 00:12:59] 2025-11-30 23:12:23,369 | INFO     | sum of deviations: 3372016413363.3613
[2025-12-01 00:12:59] 2025-11-30 23:12:23,369 | INFO     | mean x: 1764502169.6101449
[2025-12-01 00:12:59] 2025-11-30 23:12:23,369 | INFO     | mean y: 2838715.5601449274
[2025-12-01 00:12:59] 2025-11-30 23:12:23,369 | INFO     | intersect: -7298400961.847859
[2025-12-01 00:12:59] 2025-11-30 23:12:23,371 | INFO     | chi2: 21.85710865936165
[2025-12-01 00:12:59] 2025-11-30 23:12:23,373 | INFO     | sum of square deviations: 806095236421.0751
[2025-12-01 00:12:59] 2025-11-30 23:12:23,428 | INFO     | sum of deviations: 3840296278060.367
[2025-12-01 00:12:59] 2025-11-30 23:12:23,428 | INFO     | mean x: 1764502017.1141818
[2025-12-01 00:12:59] 2025-11-30 23:12:23,429 | INFO     | mean y: 2846806.3861818183
[2025-12-01 00:12:59] 2025-11-30 23:12:23,429 | INFO     | intersect: -8403369013.767796
[2025-12-01 00:12:59] 2025-11-30 23:12:23,431 | INFO     | chi2: 18.520032844156276
[2025-12-01 00:12:59] 2025-11-30 23:12:23,431 | INFO     | current chi2=18.520032844156276 (change=15.267691016286665 %)
[2025-12-01 00:12:59] 2025-11-30 23:12:23,431 | INFO     | right removable region: 1374
[2025-12-01 00:12:59] 2025-11-30 23:12:23,433 | INFO     | sum of square deviations: 806094301901.0741
[2025-12-01 00:12:59] 2025-11-30 23:12:23,488 | INFO     | sum of deviations: 2795227833294.082
[2025-12-01 00:12:59] 2025-11-30 23:12:23,488 | INFO     | mean x: 1764502322.1141818
[2025-12-01 00:12:59] 2025-11-30 23:12:23,488 | INFO     | mean y: 2848680.954909091
[2025-12-01 00:12:59] 2025-11-30 23:12:23,489 | INFO     | intersect: -6115772913.384174
[2025-12-01 00:12:59] 2025-11-30 23:12:23,490 | INFO     | chi2: 17.156316536981134
[2025-12-01 00:12:59] 2025-11-30 23:12:23,490 | INFO     | current chi2=17.156316536981134 (change=21.506925713008766 %)
[2025-12-01 00:12:59] 2025-11-30 23:12:23,491 | INFO     | left removable region: 10
[2025-12-01 00:12:59] 2025-11-30 23:12:23,493 | INFO     | sum of square deviations: 786902463404.3092
[2025-12-01 00:12:59] 2025-11-30 23:12:23,545 | INFO     | sum of deviations: 2864816403260.17
[2025-12-01 00:12:59] 2025-11-30 23:12:23,546 | INFO     | mean x: 1764502291.623167
[2025-12-01 00:12:59] 2025-11-30 23:12:23,546 | INFO     | mean y: 2867627.469208211
[2025-12-01 00:12:59] 2025-11-30 23:12:23,546 | INFO     | intersect: -6421022681.328785
[2025-12-01 00:12:59] 2025-11-30 23:12:23,548 | INFO     | chi2: 9.37355082468124
[2025-12-01 00:12:59] 2025-11-30 23:12:23,548 | INFO     | current memory leak: 3.64 B/s (using 1364 data points, chi2=9.37)
[2025-12-01 00:12:59] 2025-11-30 23:12:23,549 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-12-01 00:12:59] 2025-11-30 23:12:23,549 | INFO     | ..............................
[2025-12-01 00:12:59] 2025-11-30 23:12:23,549 | INFO     | . Timing measurements:
[2025-12-01 00:12:59] 2025-11-30 23:12:23,550 | INFO     | . get job = 0 s
[2025-12-01 00:12:59] 2025-11-30 23:12:23,550 | INFO     | . initial setup = 8 s
[2025-12-01 00:12:59] 2025-11-30 23:12:23,550 | INFO     | . payload setup = 149 s
[2025-12-01 00:12:59] 2025-11-30 23:12:23,550 | INFO     | . stage-in = 0 s
[2025-12-01 00:12:59] 2025-11-30 23:12:23,550 | INFO     | . payload execution = 84293 s
[2025-12-01 00:12:59] 2025-11-30 23:12:23,550 | INFO     | . stage-out = 7 s
[2025-12-01 00:12:59] 2025-11-30 23:12:23,550 | INFO     | . log creation = 1 s
[2025-12-01 00:12:59] 2025-11-30 23:12:23,550 | INFO     | ..............................
[2025-12-01 00:12:59] 2025-11-30 23:12:24,045 | INFO     | 
[2025-12-01 00:12:59] 2025-11-30 23:12:24,045 | INFO     | job summary report
[2025-12-01 00:12:59] 2025-11-30 23:12:24,045 | INFO     | --------------------------------------------------
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | PanDA job id: 6899500577
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | task id: 47556173
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | errors: (none)
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | pilot state: finished 
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | transexitcode: 0
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | exeerrorcode: 0
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | exeerrordiag: 
[2025-12-01 00:12:59] 2025-11-30 23:12:24,046 | INFO     | exitcode: 0
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | exitmsg: OK
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | cpuconsumptiontime: 318371 s
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | nevents: 1000
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | neventsw: 0
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | pid: 14007
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | pgrp: 14007
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | corecount: 8
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | event service: False
[2025-12-01 00:12:59] 2025-11-30 23:12:24,047 | INFO     | sizes: {0: 2283488, 1: 2284174, 2: 2284373, 12: 2284373, 23: 2284401, 34: 2284429, 45: 2284585, 55: 2284613, 66: 2284641, 77: 2284669, 87: 2284725, 89: 2285295, 98
[2025-12-01 00:12:59] 2025-11-30 23:12:24,048 | INFO     | --------------------------------------------------
[2025-12-01 00:12:59] 2025-11-30 23:12:24,048 | INFO     | 
[2025-12-01 00:12:59] 2025-11-30 23:12:24,048 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-12-01 00:12:59] 2025-11-30 23:12:24,393 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,394 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,394 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,394 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,396 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 00:12:59] 2025-11-30 23:12:24,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,396 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 00:12:59] 2025-11-30 23:12:24,397 | INFO     | job 6899500577 has completed (purged errors)
[2025-12-01 00:12:59] 2025-11-30 23:12:24,397 | INFO     | overall cleanup function is called
[2025-12-01 00:12:59] 2025-11-30 23:12:25,427 | INFO     | --- collectZombieJob: --- 10, [14007]
[2025-12-01 00:12:59] 2025-11-30 23:12:25,427 | INFO     | zombie collector waiting for pid 14007
[2025-12-01 00:12:59] 2025-11-30 23:12:25,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 00:12:59] 2025-11-30 23:12:25,428 | INFO     | collected zombie processes
[2025-12-01 00:12:59] 2025-11-30 23:12:25,428 | INFO     | will attempt to kill all subprocesses of pid=14007
[2025-12-01 00:12:59] 2025-11-30 23:12:25,548 | INFO     | process IDs to be killed: [14007] (in reverse order)
[2025-12-01 00:12:59] 2025-11-30 23:12:26,683 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 00:12:59] 2025-11-30 23:12:26,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 00:12:59] 2025-11-30 23:12:26,687 | INFO     | did not find any defunct processes belonging to 14007
[2025-12-01 00:12:59] 2025-11-30 23:12:26,689 | INFO     | did not find any defunct processes belonging to 14007
[2025-12-01 00:12:59] 2025-11-30 23:12:26,737 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 00:12:59] 2025-11-30 23:12:26,738 | INFO     | ready for new job
[2025-12-01 00:12:59] 2025-11-30 23:12:26,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 00:12:59] 2025-11-30 23:12:26,743 | INFO     | ***************************************
[2025-12-01 00:12:59] 2025-11-30 23:12:26,743 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 00:12:59] 2025-11-30 23:12:26,743 | INFO     | ***************************************
[2025-12-01 00:12:59] 2025-11-30 23:12:26,743 | INFO     | 
[2025-12-01 00:12:59] 2025-11-30 23:12:26,744 | INFO     | pilot is running in a VM
[2025-12-01 00:12:59] 2025-11-30 23:12:26,744 | INFO     | architecture information:
[2025-12-01 00:12:59] 2025-11-30 23:12:26,752 | INFO     | executing command: cat /etc/os-release
[2025-12-01 00:12:59] 2025-11-30 23:12:26,983 | INFO     | cat /etc/os-release:
[2025-12-01 00:12:59] NAME="CentOS Linux"
[2025-12-01 00:12:59] VERSION="7 (Core)"
[2025-12-01 00:12:59] ID="centos"
[2025-12-01 00:12:59] ID_LIKE="rhel fedora"
[2025-12-01 00:12:59] VERSION_ID="7"
[2025-12-01 00:12:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 00:12:59] ANSI_COLOR="0;31"
[2025-12-01 00:12:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 00:12:59] HOME_URL="https://www.centos.org/"
[2025-12-01 00:12:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 00:12:59] 
[2025-12-01 00:12:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 00:12:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 00:12:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 00:12:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 00:12:59] 
[2025-12-01 00:12:59] 2025-11-30 23:12:26,984 | INFO     | ***************************************
[2025-12-01 00:12:59] 2025-11-30 23:12:27,487 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-12-01 00:12:59] 2025-11-30 23:12:27,792 | INFO     | sufficient remaining disk space (487816429568 B)
[2025-12-01 00:12:59] 2025-11-30 23:12:27,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 00:12:59] 2025-11-30 23:12:27,792 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 00:12:59] 2025-11-30 23:12:27,792 | INFO     | update_server=False
[2025-12-01 00:12:59] 2025-11-30 23:12:27,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 00:12:59] 2025-11-30 23:12:27,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 00:12:59] 2025-11-30 23:12:27,793 | INFO     | aborting loop
[2025-12-01 00:12:59] 2025-11-30 23:12:28,218 | INFO     | all job control threads have been joined
[2025-12-01 00:12:59] 2025-11-30 23:12:28,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 00:12:59] 2025-11-30 23:12:28,797 | INFO     | [job] retrieve thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:28,799 | INFO     | [job] job monitor thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:28,877 | INFO     | all data control threads have been joined
[2025-12-01 00:12:59] 2025-11-30 23:12:29,017 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,065 | INFO     | all payload control threads have been joined
[2025-12-01 00:12:59] 2025-11-30 23:12:29,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 00:12:59] 2025-11-30 23:12:29,224 | INFO     | [job] control thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,406 | INFO     | [payload] validate_post thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,692 | INFO     | [job] queue monitor thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,883 | INFO     | [data] control thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,911 | INFO     | [payload] failed_post thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,933 | INFO     | [data] copytool_in thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,966 | INFO     | [job] validate thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:29,968 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:30,071 | INFO     | [payload] control thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:30,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 00:12:59] 2025-11-30 23:12:30,231 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:31,101 | INFO     | [data] copytool_out thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:34,157 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 00:12:59] 2025-11-30 23:12:39,994 | INFO     | [monitor] cgroup control has ended
[2025-12-01 00:12:59] 2025-11-30 23:12:40,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547366856512)>', '<ExcThread(monitor, started 140546630743808)>']
[2025-12-01 00:12:59] 2025-11-30 23:12:45,162 | INFO     | all workflow threads have been joined
[2025-12-01 00:12:59] 2025-11-30 23:12:45,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 00:12:59] 2025-11-30 23:12:45,162 | INFO     | traces error code: 0
[2025-12-01 00:12:59] 2025-11-30 23:12:45,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 00:12:59] 2025-11-30 23:12:54,459 | INFO     | 84740s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-01 00:12:59] 2025-11-30 23:12:55,649 | INFO     | PID=7440 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-01 00:12:59] 2025-11-30 23:12:55,649 | INFO     | .. there are 9 such processes running
[2025-12-01 00:12:59] 2025-11-30 23:12:55,650 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 00:12:59] 2025-11-30 23:12:55,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 00:12:59] 2025-11-30 23:12:55,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 00:12:59] 2025-11-30 23:12:55,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 00:12:59] 2025-11-30 23:12:55,651 | INFO     | [monitor] control thread has ended
[2025-12-01 00:12:59] 2025-11-30 23:12:55,946 [wrapper] ==== pilot stdout END ====
[2025-12-01 00:12:59] 2025-11-30 23:12:56,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 00:12:59] 2025-11-30 23:12:56,146 [wrapper] pilotpid: 7440
[2025-12-01 00:12:59] 2025-11-30 23:12:56,229 [wrapper] Pilot exit status: 0
[2025-12-01 00:12:59] 2025-11-30 23:12:56,515 [wrapper] pandaids: 6899500577
[2025-12-01 00:12:59] 2025-11-30 23:12:57,290 [wrapper] cleanup supervisor_pilot 20293 7441
[2025-12-01 00:12:59] 2025-11-30 23:12:57,311 [wrapper] Test setup, not cleaning
[2025-12-01 00:12:59] 2025-11-30 23:12:57,327 [wrapper] apfmon messages muted
[2025-12-01 00:12:59] 2025-11-30 23:12:57,398 [wrapper] ==== wrapper stdout END ====
[2025-12-01 00:12:59] 2025-11-30 23:12:57,508 [wrapper] ==== wrapper stderr END ====
[2025-12-01 00:12:59]  *** Error codes and diagnostics ***
[2025-12-01 00:12:59]     "exeErrorCode": 0,
[2025-12-01 00:12:59]     "exeErrorDiag": "",
[2025-12-01 00:12:59]     "pilotErrorCode": 0,
[2025-12-01 00:12:59]     "pilotErrorDiag": "",
[2025-12-01 00:12:59]  *** Listing of results directory ***
[2025-12-01 00:12:59] total 1316576
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc    576529 Nov 27 09:46 pilot3.tar.gz
[2025-12-01 00:12:59] -rwx------. 1 boinc boinc     36292 Nov 27 09:46 runpilot2-wrapper.sh
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc      5112 Nov 27 09:46 queuedata.json
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc       100 Nov 30 00:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 00:12:59] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 00:36 run_atlas
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc       105 Nov 30 00:36 job.xml
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc      6391 Nov 30 00:36 init_data.xml
[2025-12-01 00:12:59] -rw-r--r--. 2 boinc boinc 407894738 Nov 30 00:36 EVNT.47483658._003366.pool.root.1
[2025-12-01 00:12:59] -rw-r--r--. 2 boinc boinc     15847 Nov 30 00:36 start_atlas.sh
[2025-12-01 00:12:59] drwxrwx--x. 2 boinc boinc        68 Nov 30 00:36 shared
[2025-12-01 00:12:59] -rw-r--r--. 2 boinc boinc    590097 Nov 30 00:36 input.tar.gz
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc         0 Nov 30 00:36 boinc_lockfile
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc      2787 Nov 30 00:36 pandaJob.out
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc    991826 Nov 30 00:40 agis_schedconf.cvmfs.json
[2025-12-01 00:12:59] drwx------. 5 boinc boinc      4096 Nov 30 00:40 pilot3
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc       533 Nov 30 23:49 boinc_task_state.xml
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc 908912580 Dec  1 00:09 HITS.47556173._003222.pool.root.1
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc      1029 Dec  1 00:10 memory_monitor_summary.json
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc   1516240 Dec  1 00:10 agis_ddmendpoints.agis.ALL.json
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc   2460719 Dec  1 00:10 log.47556173._003222.job.log.tgz.1
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc      8627 Dec  1 00:12 heartbeat.json
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc      8192 Dec  1 00:12 boinc_mmap_file
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc        29 Dec  1 00:12 wrapper_checkpoint.txt
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc        95 Dec  1 00:12 pilot_heartbeat.json
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc       935 Dec  1 00:12 pilotlog.txt
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc  11268849 Dec  1 00:12 log.47556173._003222.job.log.1
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc       353 Dec  1 00:12 output.list
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc       620 Dec  1 00:12 runtime_log
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc  13752320 Dec  1 00:12 result.tar.gz
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc      8833 Dec  1 00:12 runtime_log.err
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc       662 Dec  1 00:12 EMMLDmBpmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLYKKDmSXtGPm.diag
[2025-12-01 00:12:59] -rw-r--r--. 1 boinc boinc     21518 Dec  1 00:12 stderr.txt
[2025-12-01 00:12:59] HITS file was successfully produced:
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc 908912580 Dec  1 00:09 shared/HITS.pool.root.1
[2025-12-01 00:12:59]  *** Contents of shared directory: ***
[2025-12-01 00:12:59] total 1299976
[2025-12-01 00:12:59] -rw-r--r--. 2 boinc boinc 407894738 Nov 30 00:36 ATLAS.root_0
[2025-12-01 00:12:59] -rw-r--r--. 2 boinc boinc     15847 Nov 30 00:36 start_atlas.sh
[2025-12-01 00:12:59] -rw-r--r--. 2 boinc boinc    590097 Nov 30 00:36 input.tar.gz
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc 908912580 Dec  1 00:09 HITS.pool.root.1
[2025-12-01 00:12:59] -rw-------. 1 boinc boinc  13752320 Dec  1 00:12 result.tar.gz
00:13:01 (3581): run_atlas exited; CPU time 318982.574821
00:13:01 (3581): called boinc_finish(0)

</stderr_txt>
]]>

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