Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:58:08 (1982806): wrapper (7.7.26015): starting
19:58:08 (1982806): wrapper: running run_atlas (--nthreads 11)
[2025-11-27 19:58:08] Arguments: --nthreads 11
[2025-11-27 19:58:08] Threads: 11
[2025-11-27 19:58:08] Checking for CVMFS
[2025-11-27 19:58:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 19:58:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 19:58:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 19:58:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 19:58:10] 2.13.2.0 2325231 32820 224128 153391 3 635 25688121 40960001 25612 16776704 0 234343301 99.714 194954268 52313 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 19:58:10] CVMFS is ok
[2025-11-27 19:58:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 19:58:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 19:58:10] Further information can be found at the LHC@home message board.
[2025-11-27 19:58:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 19:58:10] Checking for apptainer binary...
[2025-11-27 19:58:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 19:58:10] Running /usr/bin/apptainer --version
[2025-11-27 19:58:10] apptainer version 1.4.4-1.el9
[2025-11-27 19:58:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 19:58:10] c-208-37.aglt2.org
[2025-11-27 19:58:10] apptainer works
[2025-11-27 19:58:11] Set ATHENA_PROC_NUMBER=11
[2025-11-27 19:58:11] Set ATHENA_CORE_NUMBER=11
[2025-11-27 19:58:11] Starting ATLAS job with PandaID=6899497808
[2025-11-27 19:58:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 06:00:13]  *** The last 200 lines of the pilot log: ***
[2025-11-28 06:00:13] 2025-11-28 10:59:11,650 | INFO     | monitor loop #2195: job 0:6899497808 is in state 'finished'
[2025-11-28 06:00:13] 2025-11-28 10:59:11,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 06:00:13] 2025-11-28 10:59:12,463 | INFO     | time since job start (36010s) is within the limit (172800.0s)
[2025-11-28 06:00:13] 2025-11-28 10:59:14,156 | INFO     | monitor loop #2196: job 0:6899497808 is in state 'finished'
[2025-11-28 06:00:13] 2025-11-28 10:59:14,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 06:00:13] 2025-11-28 10:59:14,470 | INFO     | time since job start (36012s) is within the limit (172800.0s)
[2025-11-28 06:00:13] 2025-11-28 10:59:16,477 | INFO     | time since job start (36014s) is within the limit (172800.0s)
[2025-11-28 06:00:13] 2025-11-28 10:59:16,700 | INFO     | monitor loop #2197: job 0:6899497808 is in state 'finished'
[2025-11-28 06:00:13] 2025-11-28 10:59:16,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 06:00:13] 2025-11-28 10:59:18,496 | INFO     | time since job start (36016s) is within the limit (172800.0s)
[2025-11-28 06:00:13] 2025-11-28 10:59:19,236 | INFO     | monitor loop #2198: job 0:6899497808 is in state 'finished'
[2025-11-28 06:00:13] 2025-11-28 10:59:19,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 06:00:13] 2025-11-28 10:59:20,513 | INFO     | time since job start (36018s) is within the limit (172800.0s)
[2025-11-28 06:00:13] 2025-11-28 10:59:20,513 | INFO     | 36023s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-28 06:00:13] 2025-11-28 10:59:21,742 | INFO     | monitor loop #2199: job 0:6899497808 is in state 'finished'
[2025-11-28 06:00:13] 2025-11-28 10:59:21,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 06:00:13] 2025-11-28 10:59:22,522 | INFO     | time since job start (36020s) is within the limit (172800.0s)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,242 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 06:00:13] 2025-11-28 10:59:23,247 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3706.4399375000007
[2025-11-28 06:00:13] 2025-11-28 10:59:23,274 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6899497808/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,275 | INFO     | extracted standard info from prmon json
[2025-11-28 06:00:13] 2025-11-28 10:59:23,275 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 06:00:13] 2025-11-28 10:59:23,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 06:00:13] 2025-11-28 10:59:23,289 | INFO     | fitting pss+swap vs Time
[2025-11-28 06:00:13] 2025-11-28 10:59:23,289 | INFO     | sum of square deviations: 63044389564.66678
[2025-11-28 06:00:13] 2025-11-28 10:59:23,298 | INFO     | sum of deviations: -878631615768.4762
[2025-11-28 06:00:13] 2025-11-28 10:59:23,298 | INFO     | mean x: 1764309577.8095238
[2025-11-28 06:00:13] 2025-11-28 10:59:23,298 | INFO     | mean y: 3197818.299319728
[2025-11-28 06:00:13] 2025-11-28 10:59:23,298 | INFO     | intersect: 24591875506.68441
[2025-11-28 06:00:13] 2025-11-28 10:59:23,303 | INFO     | chi2: 33.50885122188108
[2025-11-28 06:00:13] 2025-11-28 10:59:23,303 | INFO     | sum of square deviations: 61450299412.76854
[2025-11-28 06:00:13] 2025-11-28 10:59:23,311 | INFO     | sum of deviations: -658650734931.8794
[2025-11-28 06:00:13] 2025-11-28 10:59:23,312 | INFO     | mean x: 1764309425.3293312
[2025-11-28 06:00:13] 2025-11-28 10:59:23,312 | INFO     | mean y: 3218853.051457976
[2025-11-28 06:00:13] 2025-11-28 10:59:23,312 | INFO     | intersect: 18913845989.8648
[2025-11-28 06:00:13] 2025-11-28 10:59:23,312 | INFO     | chi2: 29.621389052218554
[2025-11-28 06:00:13] 2025-11-28 10:59:23,312 | INFO     | current chi2=29.621389052218554 (change=11.601299441516028 %)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,312 | INFO     | right removable region: 582
[2025-11-28 06:00:13] 2025-11-28 10:59:23,312 | INFO     | sum of square deviations: 61449471032.768524
[2025-11-28 06:00:13] 2025-11-28 10:59:23,321 | INFO     | sum of deviations: -1118454934693.645
[2025-11-28 06:00:13] 2025-11-28 10:59:23,321 | INFO     | mean x: 1764309730.3293312
[2025-11-28 06:00:13] 2025-11-28 10:59:23,321 | INFO     | mean y: 3220737.295025729
[2025-11-28 06:00:13] 2025-11-28 10:59:23,321 | INFO     | intersect: 32115798617.136703
[2025-11-28 06:00:13] 2025-11-28 10:59:23,324 | INFO     | chi2: 30.266643087034684
[2025-11-28 06:00:13] 2025-11-28 10:59:23,324 | INFO     | current chi2=30.266643087034684 (change=9.675676773810899 %)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,325 | INFO     | left removable region: 10
[2025-11-28 06:00:13] 2025-11-28 10:59:23,325 | INFO     | sum of square deviations: 58036943964.63456
[2025-11-28 06:00:13] 2025-11-28 10:59:23,329 | INFO     | sum of deviations: -902658589668.8079
[2025-11-28 06:00:13] 2025-11-28 10:59:23,329 | INFO     | mean x: 1764309699.8653846
[2025-11-28 06:00:13] 2025-11-28 10:59:23,334 | INFO     | mean y: 3251711.625874126
[2025-11-28 06:00:13] 2025-11-28 10:59:23,334 | INFO     | intersect: 27443864477.003994
[2025-11-28 06:00:13] 2025-11-28 10:59:23,335 | INFO     | chi2: 25.360572620963044
[2025-11-28 06:00:13] 2025-11-28 10:59:23,335 | INFO     | current memory leak: -15.55 B/s (using 572 data points, chi2=25.36)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | could have reported an average CPU frequency of 3716 MHz (23 samples)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | ..............................
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | . Timing measurements:
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | . get job = 0 s
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | . initial setup = 5 s
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | . payload setup = 38 s
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | . stage-in = 0 s
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | . payload execution = 35867 s
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | . stage-out = 6 s
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | . log creation = 1 s
[2025-11-28 06:00:13] 2025-11-28 10:59:23,336 | INFO     | ..............................
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | 
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | job summary report
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | --------------------------------------------------
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | PanDA job id: 6899497808
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | task id: 47556173
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | errors: (none)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | pilot state: finished 
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | transexitcode: 0
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | exeerrorcode: 0
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | exeerrordiag: 
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | exitcode: 0
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | exitmsg: OK
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | cpuconsumptiontime: 137175 s
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | nevents: 1000
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | neventsw: 0
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | pid: 2004114
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | pgrp: 2004114
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | corecount: 11
[2025-11-28 06:00:13] 2025-11-28 10:59:23,445 | INFO     | event service: False
[2025-11-28 06:00:13] 2025-11-28 10:59:23,446 | INFO     | sizes: {0: 2284089, 1: 2284344, 12: 2284344, 23: 2284372, 32: 2284662, 34: 2284690, 35910: 2326288, 35911: 2326287, 35918: 2335337, 35920: 2335393, 35957: 2335639}
[2025-11-28 06:00:13] 2025-11-28 10:59:23,446 | INFO     | --------------------------------------------------
[2025-11-28 06:00:13] 2025-11-28 10:59:23,446 | INFO     | 
[2025-11-28 06:00:13] 2025-11-28 10:59:23,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 06:00:13] 2025-11-28 10:59:23,552 | INFO     | job 6899497808 has completed (purged errors)
[2025-11-28 06:00:13] 2025-11-28 10:59:23,552 | INFO     | overall cleanup function is called
[2025-11-28 06:00:13] 2025-11-28 10:59:24,578 | INFO     | --- collectZombieJob: --- 10, [2004114]
[2025-11-28 06:00:13] 2025-11-28 10:59:24,579 | INFO     | zombie collector waiting for pid 2004114
[2025-11-28 06:00:13] 2025-11-28 10:59:24,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 06:00:13] 2025-11-28 10:59:24,579 | INFO     | collected zombie processes
[2025-11-28 06:00:13] 2025-11-28 10:59:24,579 | INFO     | will attempt to kill all subprocesses of pid=2004114
[2025-11-28 06:00:13] 2025-11-28 10:59:25,877 | INFO     | process IDs to be killed: [2004114] (in reverse order)
[2025-11-28 06:00:13] 2025-11-28 10:59:26,347 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 06:00:13] 2025-11-28 10:59:26,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 06:00:13] 2025-11-28 10:59:26,396 | INFO     | did not find any defunct processes belonging to 2004114
[2025-11-28 06:00:13] 2025-11-28 10:59:26,438 | INFO     | did not find any defunct processes belonging to 2004114
[2025-11-28 06:00:13] 2025-11-28 10:59:26,454 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 06:00:13] 2025-11-28 10:59:26,454 | INFO     | ready for new job
[2025-11-28 06:00:13] 2025-11-28 10:59:26,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 06:00:13] 2025-11-28 10:59:26,456 | INFO     | ***************************************
[2025-11-28 06:00:13] 2025-11-28 10:59:26,457 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 06:00:13] 2025-11-28 10:59:26,457 | INFO     | ***************************************
[2025-11-28 06:00:13] 2025-11-28 10:59:26,457 | INFO     | 
[2025-11-28 06:00:13] 2025-11-28 10:59:26,500 | INFO     | architecture information:
[2025-11-28 06:00:13] 2025-11-28 10:59:26,503 | INFO     | executing command: cat /etc/os-release
[2025-11-28 06:00:13] 2025-11-28 10:59:26,559 | INFO     | cat /etc/os-release:
[2025-11-28 06:00:13] NAME="CentOS Linux"
[2025-11-28 06:00:13] VERSION="7 (Core)"
[2025-11-28 06:00:13] ID="centos"
[2025-11-28 06:00:13] ID_LIKE="rhel fedora"
[2025-11-28 06:00:13] VERSION_ID="7"
[2025-11-28 06:00:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 06:00:13] ANSI_COLOR="0;31"
[2025-11-28 06:00:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 06:00:13] HOME_URL="https://www.centos.org/"
[2025-11-28 06:00:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 06:00:13] 
[2025-11-28 06:00:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 06:00:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 06:00:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 06:00:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 06:00:13] 
[2025-11-28 06:00:13] 2025-11-28 10:59:26,559 | INFO     | ***************************************
[2025-11-28 06:00:13] 2025-11-28 10:59:27,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-28 06:00:13] 2025-11-28 10:59:27,111 | INFO     | sufficient remaining disk space (155017281536 B)
[2025-11-28 06:00:13] 2025-11-28 10:59:27,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 06:00:13] 2025-11-28 10:59:27,111 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 06:00:13] 2025-11-28 10:59:27,111 | INFO     | update_server=False
[2025-11-28 06:00:13] 2025-11-28 10:59:27,111 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 06:00:13] 2025-11-28 10:59:27,432 | INFO     | all data control threads have been joined
[2025-11-28 06:00:13] 2025-11-28 10:59:27,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:00:13] 2025-11-28 10:59:27,803 | INFO     | aborting loop
[2025-11-28 06:00:13] 2025-11-28 10:59:28,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 06:00:13] 2025-11-28 10:59:28,118 | INFO     | [job] retrieve thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:28,160 | INFO     | [job] validate thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:28,195 | INFO     | all job control threads have been joined
[2025-11-28 06:00:13] 2025-11-28 10:59:28,301 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:28,352 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:28,439 | INFO     | [data] control thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:28,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:00:13] 2025-11-28 10:59:28,561 | INFO     | all payload control threads have been joined
[2025-11-28 06:00:13] 2025-11-28 10:59:28,668 | INFO     | [payload] validate_post thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:28,808 | INFO     | [job] job monitor thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:28,979 | INFO     | [data] copytool_in thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:29,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:29,155 | INFO     | [payload] failed_post thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:29,203 | INFO     | [job] control thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:29,301 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:29,468 | INFO     | [job] queue monitor thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:29,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 06:00:13] 2025-11-28 10:59:29,567 | INFO     | [payload] control thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:30,081 | INFO     | [data] copytool_out thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:33,490 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 06:00:13] 2025-11-28 10:59:56,952 | INFO     | PID=1989057 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 06:00:13] 2025-11-28 10:59:56,952 | INFO     | .. there are 37 such processes running
[2025-11-28 06:00:13] 2025-11-28 10:59:56,953 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 06:00:13] 2025-11-28 10:59:56,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 06:00:13] 2025-11-28 10:59:56,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 06:00:13] 2025-11-28 11:00:06,678 | INFO     | [monitor] cgroup control has ended
[2025-11-28 06:00:13] 2025-11-28 11:00:07,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289130743616)>', '<ExcThread(monitor, started 140288764917504)>']
[2025-11-28 06:00:13] 2025-11-28 11:00:08,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 06:00:13] 2025-11-28 11:00:08,030 | INFO     | [monitor] control thread has ended
[2025-11-28 06:00:13] 2025-11-28 11:00:12,263 | INFO     | all workflow threads have been joined
[2025-11-28 06:00:13] 2025-11-28 11:00:12,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 06:00:13] 2025-11-28 11:00:12,264 | INFO     | traces error code: 0
[2025-11-28 06:00:13] 2025-11-28 11:00:12,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 06:00:13] 2025-11-28 11:00:12,733 [wrapper] ==== pilot stdout END ====
[2025-11-28 06:00:13] 2025-11-28 11:00:12,776 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 06:00:13] 2025-11-28 11:00:12,782 [wrapper] pilotpid: 1989057
[2025-11-28 06:00:13] 2025-11-28 11:00:12,826 [wrapper] Pilot exit status: 0
[2025-11-28 06:00:13] 2025-11-28 11:00:12,894 [wrapper] pandaids: 6899497808
[2025-11-28 06:00:13] 2025-11-28 11:00:13,389 [wrapper] cleanup supervisor_pilot  204686 1989058
[2025-11-28 06:00:13] 2025-11-28 11:00:13,425 [wrapper] Test setup, not cleaning
[2025-11-28 06:00:13] 2025-11-28 11:00:13,453 [wrapper] apfmon messages muted
[2025-11-28 06:00:13] 2025-11-28 11:00:13,471 [wrapper] ==== wrapper stdout END ====
[2025-11-28 06:00:13] 2025-11-28 11:00:13,482 [wrapper] ==== wrapper stderr END ====
[2025-11-28 06:00:13]  *** Error codes and diagnostics ***
[2025-11-28 06:00:13]     "exeErrorCode": 0,
[2025-11-28 06:00:13]     "exeErrorDiag": "",
[2025-11-28 06:00:13]     "pilotErrorCode": 0,
[2025-11-28 06:00:13]     "pilotErrorDiag": "",
[2025-11-28 06:00:13]  *** Listing of results directory ***
[2025-11-28 06:00:14] total 1315680
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-11-28 06:00:14] -rwx------. 1 boincer umatlas     36292 Nov 27 03:46 runpilot2-wrapper.sh
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 27 03:46 queuedata.json
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas       100 Nov 27 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 06:00:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 19:58 run_atlas
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas       105 Nov 27 19:58 job.xml
[2025-11-28 06:00:14] -rw-r--r--. 2 boincer umatlas 408735697 Nov 27 19:58 EVNT.47483658._003347.pool.root.1
[2025-11-28 06:00:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 19:58 start_atlas.sh
[2025-11-28 06:00:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 19:58 shared
[2025-11-28 06:00:14] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 19:58 input.tar.gz
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas         0 Nov 27 19:58 boinc_lockfile
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 19:58 pandaJob.out
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas        57 Nov 27 19:58 setup.sh.local
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas    991826 Nov 27 19:58 agis_schedconf.cvmfs.json
[2025-11-28 06:00:14] drwx------. 5 boincer umatlas      4096 Nov 27 19:59 pilot3
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas       533 Nov 28 05:17 boinc_task_state.xml
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas 921072235 Nov 28 05:57 HITS.47556173._003032.pool.root.1
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas      7176 Nov 28 05:58 init_data.xml
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas      1052 Nov 28 05:58 memory_monitor_summary.json
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas   1516240 Nov 28 05:58 agis_ddmendpoints.agis.ALL.json
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas   2147140 Nov 28 05:58 log.47556173._003032.job.log.tgz.1
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas      8587 Nov 28 05:59 heartbeat.json
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas        95 Nov 28 05:59 pilot_heartbeat.json
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas        29 Nov 28 06:00 wrapper_checkpoint.txt
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 06:00 boinc_mmap_file
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas      4825 Nov 28 06:00 pilotlog.txt
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas   4616502 Nov 28 06:00 log.47556173._003032.job.log.1
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas       353 Nov 28 06:00 output.list
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas       620 Nov 28 06:00 runtime_log
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas   6778880 Nov 28 06:00 result.tar.gz
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas      9345 Nov 28 06:00 runtime_log.err
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas       660 Nov 28 06:00 BJcNDm1omi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwXKKDmlsYqvn.diag
[2025-11-28 06:00:14] -rw-r--r--. 1 boincer umatlas     21844 Nov 28 06:00 stderr.txt
[2025-11-28 06:00:14] HITS file was successfully produced:
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas 921072235 Nov 28 05:57 shared/HITS.pool.root.1
[2025-11-28 06:00:14]  *** Contents of shared directory: ***
[2025-11-28 06:00:14] total 1305868
[2025-11-28 06:00:14] -rw-r--r--. 2 boincer umatlas 408735697 Nov 27 19:58 ATLAS.root_0
[2025-11-28 06:00:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 19:58 start_atlas.sh
[2025-11-28 06:00:14] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 19:58 input.tar.gz
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas 921072235 Nov 28 05:57 HITS.pool.root.1
[2025-11-28 06:00:14] -rw-------. 1 boincer umatlas   6778880 Nov 28 06:00 result.tar.gz
06:00:36 (1982806): run_atlas exited; CPU time 137691.029067
06:00:36 (1982806): called boinc_finish(0)

</stderr_txt>
]]>

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