Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:16:04 (13970): wrapper (7.7.26015): starting
20:16:04 (13970): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 20:16:04] Arguments: --nthreads 12
[2025-11-27 20:16:04] Threads: 12
[2025-11-27 20:16:04] Checking for CVMFS
[2025-11-27 20:16:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 20:16:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 20:16:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 20:16:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 20:16:04] 2.11.2.0 2981 289843 92144 153391 1 81 10447154 20275201 1 130560 1 131770050 99.969 16906139 14251 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 20:16:04] CVMFS is ok
[2025-11-27 20:16:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 20:16:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 20:16:04] Further information can be found at the LHC@home message board.
[2025-11-27 20:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 20:16:04] Checking for apptainer binary...
[2025-11-27 20:16:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 20:16:04] Running /usr/bin/apptainer --version
[2025-11-27 20:16:04] apptainer version 1.3.2-1.el7
[2025-11-27 20:16:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 20:16:05] c-205-30.aglt2.org
[2025-11-27 20:16:05] apptainer works
[2025-11-27 20:16:05] Set ATHENA_PROC_NUMBER=12
[2025-11-27 20:16:05] Set ATHENA_CORE_NUMBER=12
[2025-11-27 20:16:06] Starting ATLAS job with PandaID=6898214300
[2025-11-27 20:16:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 03:35:10]  *** The last 200 lines of the pilot log: ***
[2025-11-28 03:35:10] 2025-11-28 08:34:21,712 | INFO     | extracted standard info from prmon json
[2025-11-28 03:35:10] 2025-11-28 08:34:21,712 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 03:35:10] 2025-11-28 08:34:21,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 03:35:10] 2025-11-28 08:34:21,719 | INFO     | fitting pss+swap vs Time
[2025-11-28 03:35:10] 2025-11-28 08:34:21,720 | INFO     | sum of square deviations: 24826133379.0161
[2025-11-28 03:35:10] 2025-11-28 08:34:21,724 | INFO     | sum of deviations: 278088456405.0138
[2025-11-28 03:35:10] 2025-11-28 08:34:21,724 | INFO     | mean x: 1764305725.1925755
[2025-11-28 03:35:10] 2025-11-28 08:34:21,724 | INFO     | mean y: 3423233.879350348
[2025-11-28 03:35:10] 2025-11-28 08:34:21,724 | INFO     | intersect: -19759342407.266834
[2025-11-28 03:35:10] 2025-11-28 08:34:21,725 | INFO     | chi2: 7.102369152728823
[2025-11-28 03:35:10] 2025-11-28 08:34:21,725 | INFO     | sum of square deviations: 23972124076.32833
[2025-11-28 03:35:10] 2025-11-28 08:34:21,729 | INFO     | sum of deviations: 449850811964.2017
[2025-11-28 03:35:10] 2025-11-28 08:34:21,729 | INFO     | mean x: 1764305572.6948357
[2025-11-28 03:35:10] 2025-11-28 08:34:21,729 | INFO     | mean y: 3453877.455399061
[2025-11-28 03:35:10] 2025-11-28 08:34:21,729 | INFO     | intersect: -33104763479.614952
[2025-11-28 03:35:10] 2025-11-28 08:34:21,730 | INFO     | chi2: 3.8503649413812266
[2025-11-28 03:35:10] 2025-11-28 08:34:21,730 | INFO     | current chi2=3.8503649413812266 (change=45.78759765110398 %)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,730 | INFO     | sum of square deviations: 23137929098.636715
[2025-11-28 03:35:10] 2025-11-28 08:34:21,734 | INFO     | sum of deviations: 547101924163.7606
[2025-11-28 03:35:10] 2025-11-28 08:34:21,734 | INFO     | mean x: 1764305420.1971498
[2025-11-28 03:35:10] 2025-11-28 08:34:21,734 | INFO     | mean y: 3471632.966745843
[2025-11-28 03:35:10] 2025-11-28 08:34:21,734 | INFO     | intersect: -41713956322.12564
[2025-11-28 03:35:10] 2025-11-28 08:34:21,735 | INFO     | chi2: 2.6689492439352636
[2025-11-28 03:35:10] 2025-11-28 08:34:21,735 | INFO     | current chi2=2.6689492439352636 (change=30.683213550717568 %)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,735 | INFO     | sum of square deviations: 22323315883.439766
[2025-11-28 03:35:10] 2025-11-28 08:34:21,739 | INFO     | sum of deviations: 542887438219.85077
[2025-11-28 03:35:10] 2025-11-28 08:34:21,739 | INFO     | mean x: 1764305267.6995192
[2025-11-28 03:35:10] 2025-11-28 08:34:21,739 | INFO     | mean y: 3470832.2548076925
[2025-11-28 03:35:10] 2025-11-28 08:34:21,739 | INFO     | intersect: -42903200023.47252
[2025-11-28 03:35:10] 2025-11-28 08:34:21,740 | INFO     | chi2: 2.6447588487443308
[2025-11-28 03:35:10] 2025-11-28 08:34:21,740 | INFO     | current chi2=2.6447588487443308 (change=0.9063640024590721 %)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,740 | INFO     | right removable region: 415
[2025-11-28 03:35:10] 2025-11-28 08:34:21,741 | INFO     | sum of square deviations: 23972073446.32833
[2025-11-28 03:35:10] 2025-11-28 08:34:21,744 | INFO     | sum of deviations: 130003476749.73233
[2025-11-28 03:35:10] 2025-11-28 08:34:21,745 | INFO     | mean x: 1764305877.6948357
[2025-11-28 03:35:10] 2025-11-28 08:34:21,745 | INFO     | mean y: 3449604.1056338027
[2025-11-28 03:35:10] 2025-11-28 08:34:21,745 | INFO     | intersect: -9564596258.253733
[2025-11-28 03:35:10] 2025-11-28 08:34:21,745 | INFO     | chi2: 4.637230234200718
[2025-11-28 03:35:10] 2025-11-28 08:34:21,745 | INFO     | current chi2=4.637230234200718 (change=34.70868474332915 %)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,746 | INFO     | sum of square deviations: 23137879565.415806
[2025-11-28 03:35:10] 2025-11-28 08:34:21,750 | INFO     | sum of deviations: 95805370407.30191
[2025-11-28 03:35:10] 2025-11-28 08:34:21,750 | INFO     | mean x: 1764306030.192399
[2025-11-28 03:35:10] 2025-11-28 08:34:21,750 | INFO     | mean y: 3455849.156769596
[2025-11-28 03:35:10] 2025-11-28 08:34:21,750 | INFO     | intersect: -7301880504.441869
[2025-11-28 03:35:10] 2025-11-28 08:34:21,751 | INFO     | chi2: 4.5648266419416785
[2025-11-28 03:35:10] 2025-11-28 08:34:21,751 | INFO     | current chi2=4.5648266419416785 (change=1.561354269732937 %)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,751 | INFO     | left removable region: 20
[2025-11-28 03:35:10] 2025-11-28 08:34:21,751 | INFO     | sum of square deviations: 19110447038.59738
[2025-11-28 03:35:10] 2025-11-28 08:34:21,755 | INFO     | sum of deviations: 315858129741.2938
[2025-11-28 03:35:10] 2025-11-28 08:34:21,755 | INFO     | mean x: 1764305847.1974683
[2025-11-28 03:35:10] 2025-11-28 08:34:21,755 | INFO     | mean y: 3514197.8936708863
[2025-11-28 03:35:10] 2025-11-28 08:34:21,755 | INFO     | intersect: -29156993877.187046
[2025-11-28 03:35:10] 2025-11-28 08:34:21,755 | INFO     | chi2: 0.02936809699448277
[2025-11-28 03:35:10] 2025-11-28 08:34:21,756 | INFO     | current memory leak: 16.53 B/s (using 395 data points, chi2=0.03)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,756 | INFO     | could have reported an average CPU frequency of 2429 MHz (18 samples)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,756 | INFO     | ..............................
[2025-11-28 03:35:10] 2025-11-28 08:34:21,756 | INFO     | . Timing measurements:
[2025-11-28 03:35:10] 2025-11-28 08:34:21,756 | INFO     | . get job = 0 s
[2025-11-28 03:35:10] 2025-11-28 08:34:21,756 | INFO     | . initial setup = 2 s
[2025-11-28 03:35:10] 2025-11-28 08:34:21,757 | INFO     | . payload setup = 7 s
[2025-11-28 03:35:10] 2025-11-28 08:34:21,757 | INFO     | . stage-in = 0 s
[2025-11-28 03:35:10] 2025-11-28 08:34:21,757 | INFO     | . payload execution = 26243 s
[2025-11-28 03:35:10] 2025-11-28 08:34:21,757 | INFO     | . stage-out = 3 s
[2025-11-28 03:35:10] 2025-11-28 08:34:21,757 | INFO     | . log creation = 0 s
[2025-11-28 03:35:10] 2025-11-28 08:34:21,757 | INFO     | ..............................
[2025-11-28 03:35:10] 2025-11-28 08:34:21,837 | INFO     | 
[2025-11-28 03:35:10] 2025-11-28 08:34:21,837 | INFO     | job summary report
[2025-11-28 03:35:10] 2025-11-28 08:34:21,837 | INFO     | --------------------------------------------------
[2025-11-28 03:35:10] 2025-11-28 08:34:21,837 | INFO     | PanDA job id: 6898214300
[2025-11-28 03:35:10] 2025-11-28 08:34:21,837 | INFO     | task id: 47556161
[2025-11-28 03:35:10] 2025-11-28 08:34:21,838 | INFO     | errors: (none)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 03:35:10] 2025-11-28 08:34:21,838 | INFO     | pilot state: finished 
[2025-11-28 03:35:10] 2025-11-28 08:34:21,838 | INFO     | transexitcode: 0
[2025-11-28 03:35:10] 2025-11-28 08:34:21,838 | INFO     | exeerrorcode: 0
[2025-11-28 03:35:10] 2025-11-28 08:34:21,838 | INFO     | exeerrordiag: 
[2025-11-28 03:35:10] 2025-11-28 08:34:21,839 | INFO     | exitcode: 0
[2025-11-28 03:35:10] 2025-11-28 08:34:21,839 | INFO     | exitmsg: OK
[2025-11-28 03:35:10] 2025-11-28 08:34:21,839 | INFO     | cpuconsumptiontime: 299687 s
[2025-11-28 03:35:10] 2025-11-28 08:34:21,839 | INFO     | nevents: 1000
[2025-11-28 03:35:10] 2025-11-28 08:34:21,839 | INFO     | neventsw: 0
[2025-11-28 03:35:10] 2025-11-28 08:34:21,839 | INFO     | pid: 24125
[2025-11-28 03:35:10] 2025-11-28 08:34:21,839 | INFO     | pgrp: 24125
[2025-11-28 03:35:10] 2025-11-28 08:34:21,840 | INFO     | corecount: 12
[2025-11-28 03:35:10] 2025-11-28 08:34:21,840 | INFO     | event service: False
[2025-11-28 03:35:10] 2025-11-28 08:34:21,840 | INFO     | sizes: {0: 2284031, 1: 2284286, 6: 2284548, 12: 2284576, 26255: 2322006, 26259: 2331184, 26265: 2331374}
[2025-11-28 03:35:10] 2025-11-28 08:34:21,840 | INFO     | --------------------------------------------------
[2025-11-28 03:35:10] 2025-11-28 08:34:21,840 | INFO     | 
[2025-11-28 03:35:10] 2025-11-28 08:34:21,840 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 03:35:10] 2025-11-28 08:34:21,863 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,864 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,864 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,864 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,867 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,867 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,867 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 03:35:10] 2025-11-28 08:34:21,867 | INFO     | job 6898214300 has completed (purged errors)
[2025-11-28 03:35:10] 2025-11-28 08:34:21,867 | INFO     | overall cleanup function is called
[2025-11-28 03:35:10] 2025-11-28 08:34:22,883 | INFO     | --- collectZombieJob: --- 10, [24125]
[2025-11-28 03:35:10] 2025-11-28 08:34:22,883 | INFO     | zombie collector waiting for pid 24125
[2025-11-28 03:35:10] 2025-11-28 08:34:22,883 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 03:35:10] 2025-11-28 08:34:22,883 | INFO     | collected zombie processes
[2025-11-28 03:35:10] 2025-11-28 08:34:22,883 | INFO     | will attempt to kill all subprocesses of pid=24125
[2025-11-28 03:35:10] 2025-11-28 08:34:22,977 | INFO     | process IDs to be killed: [24125] (in reverse order)
[2025-11-28 03:35:10] 2025-11-28 08:34:23,027 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 03:35:10] 2025-11-28 08:34:23,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 03:35:10] 2025-11-28 08:34:23,031 | INFO     | did not find any defunct processes belonging to 24125
[2025-11-28 03:35:10] 2025-11-28 08:34:23,033 | INFO     | did not find any defunct processes belonging to 24125
[2025-11-28 03:35:10] 2025-11-28 08:34:23,035 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 03:35:10] 2025-11-28 08:34:23,035 | INFO     | ready for new job
[2025-11-28 03:35:10] 2025-11-28 08:34:23,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 03:35:10] 2025-11-28 08:34:23,037 | INFO     | ***************************************
[2025-11-28 03:35:10] 2025-11-28 08:34:23,037 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 03:35:10] 2025-11-28 08:34:23,037 | INFO     | ***************************************
[2025-11-28 03:35:10] 2025-11-28 08:34:23,037 | INFO     | 
[2025-11-28 03:35:10] 2025-11-28 08:34:23,038 | INFO     | architecture information:
[2025-11-28 03:35:10] 2025-11-28 08:34:23,038 | INFO     | executing command: cat /etc/os-release
[2025-11-28 03:35:10] 2025-11-28 08:34:23,052 | INFO     | cat /etc/os-release:
[2025-11-28 03:35:10] NAME="CentOS Linux"
[2025-11-28 03:35:10] VERSION="7 (Core)"
[2025-11-28 03:35:10] ID="centos"
[2025-11-28 03:35:10] ID_LIKE="rhel fedora"
[2025-11-28 03:35:10] VERSION_ID="7"
[2025-11-28 03:35:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 03:35:10] ANSI_COLOR="0;31"
[2025-11-28 03:35:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 03:35:10] HOME_URL="https://www.centos.org/"
[2025-11-28 03:35:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 03:35:10] 
[2025-11-28 03:35:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 03:35:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 03:35:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 03:35:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 03:35:10] 
[2025-11-28 03:35:10] 2025-11-28 08:34:23,053 | INFO     | ***************************************
[2025-11-28 03:35:10] 2025-11-28 08:34:23,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 03:35:10] 2025-11-28 08:34:23,572 | INFO     | sufficient remaining disk space (28237103104 B)
[2025-11-28 03:35:10] 2025-11-28 08:34:23,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 03:35:10] 2025-11-28 08:34:23,573 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 03:35:10] 2025-11-28 08:34:23,573 | INFO     | update_server=False
[2025-11-28 03:35:10] 2025-11-28 08:34:23,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 03:35:10] 2025-11-28 08:34:23,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:35:10] 2025-11-28 08:34:23,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:35:10] 2025-11-28 08:34:23,574 | INFO     | aborting loop
[2025-11-28 03:35:10] 2025-11-28 08:34:23,607 | INFO     | all data control threads have been joined
[2025-11-28 03:35:10] 2025-11-28 08:34:23,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 03:35:10] 2025-11-28 08:34:23,854 | INFO     | all payload control threads have been joined
[2025-11-28 03:35:10] 2025-11-28 08:34:24,268 | INFO     | all job control threads have been joined
[2025-11-28 03:35:10] 2025-11-28 08:34:24,579 | INFO     | [job] retrieve thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:24,579 | INFO     | [job] queue monitor thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:24,580 | INFO     | [job] job monitor thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:24,613 | INFO     | [data] control thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:24,736 | INFO     | [job] validate thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:24,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:24,860 | INFO     | [payload] control thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:24,900 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:25,035 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:25,274 | INFO     | [job] control thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:25,306 | INFO     | [data] copytool_in thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:25,317 | INFO     | [payload] failed_post thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:25,837 | INFO     | [data] copytool_out thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:26,057 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:26,117 | INFO     | [payload] validate_post thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:26,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 03:35:10] 2025-11-28 08:34:30,675 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 03:35:10] 2025-11-28 08:34:53,316 | INFO     | PID=17651 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 03:35:10] 2025-11-28 08:34:53,317 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 03:35:10] 2025-11-28 08:34:53,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 03:35:10] 2025-11-28 08:34:53,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 03:35:10] 2025-11-28 08:35:03,831 | INFO     | [monitor] cgroup control has ended
[2025-11-28 03:35:10] 2025-11-28 08:35:05,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748900636480)>', '<ExcThread(monitor, started 139748463060736)>']
[2025-11-28 03:35:10] 2025-11-28 08:35:05,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 03:35:10] 2025-11-28 08:35:05,374 | INFO     | [monitor] control thread has ended
[2025-11-28 03:35:10] 2025-11-28 08:35:10,025 | INFO     | all workflow threads have been joined
[2025-11-28 03:35:10] 2025-11-28 08:35:10,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 03:35:10] 2025-11-28 08:35:10,026 | INFO     | traces error code: 0
[2025-11-28 03:35:10] 2025-11-28 08:35:10,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 03:35:10] 2025-11-28 08:35:10,123 [wrapper] ==== pilot stdout END ====
[2025-11-28 03:35:10] 2025-11-28 08:35:10,126 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 03:35:10] 2025-11-28 08:35:10,130 [wrapper] pilotpid: 17651
[2025-11-28 03:35:10] 2025-11-28 08:35:10,133 [wrapper] Pilot exit status: 0
[2025-11-28 03:35:10] 2025-11-28 08:35:10,147 [wrapper] pandaids: 6898214300
[2025-11-28 03:35:10] 2025-11-28 08:35:10,191 [wrapper] cleanup supervisor_pilot  4238 17652
[2025-11-28 03:35:10] 2025-11-28 08:35:10,195 [wrapper] Test setup, not cleaning
[2025-11-28 03:35:10] 2025-11-28 08:35:10,199 [wrapper] apfmon messages muted
[2025-11-28 03:35:10] 2025-11-28 08:35:10,203 [wrapper] ==== wrapper stdout END ====
[2025-11-28 03:35:10] 2025-11-28 08:35:10,207 [wrapper] ==== wrapper stderr END ====
[2025-11-28 03:35:10]  *** Error codes and diagnostics ***
[2025-11-28 03:35:10]     "exeErrorCode": 0,
[2025-11-28 03:35:10]     "exeErrorDiag": "",
[2025-11-28 03:35:10]     "pilotErrorCode": 0,
[2025-11-28 03:35:10]     "pilotErrorDiag": "",
[2025-11-28 03:35:10]  *** Listing of results directory ***
[2025-11-28 03:35:10] total 1321180
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-28 03:35:10] -rwx------ 1 boincer umatlas     36292 Nov 25 23:28 runpilot2-wrapper.sh
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:28 queuedata.json
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas       100 Nov 27 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 03:35:10] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 20:16 run_atlas
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas       105 Nov 27 20:16 job.xml
[2025-11-28 03:35:10] -rw-r--r-- 2 boincer umatlas 410844293 Nov 27 20:16 EVNT.47483658._002493.pool.root.1
[2025-11-28 03:35:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 20:16 start_atlas.sh
[2025-11-28 03:35:10] drwxrwx--x 2 boincer umatlas      4096 Nov 27 20:16 shared
[2025-11-28 03:35:10] -rw-r--r-- 2 boincer umatlas    590106 Nov 27 20:16 input.tar.gz
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas         0 Nov 27 20:16 boinc_lockfile
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas      2782 Nov 27 20:16 pandaJob.out
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas        57 Nov 27 20:16 setup.sh.local
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas    991826 Nov 27 20:16 agis_schedconf.cvmfs.json
[2025-11-28 03:35:10] drwx------ 5 boincer umatlas      4096 Nov 27 20:16 pilot3
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas       532 Nov 28 03:21 boinc_task_state.xml
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas      5955 Nov 28 03:30 init_data.xml
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas 926371745 Nov 28 03:33 HITS.47556161._004751.pool.root.1
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas      1062 Nov 28 03:34 memory_monitor_summary.json
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas   1516240 Nov 28 03:34 agis_ddmendpoints.agis.ALL.json
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas   2192264 Nov 28 03:34 log.47556161._004751.job.log.tgz.1
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas      8676 Nov 28 03:34 heartbeat.json
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas        95 Nov 28 03:34 pilot_heartbeat.json
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas      4746 Nov 28 03:35 pilotlog.txt
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas   3683959 Nov 28 03:35 log.47556161._004751.job.log.1
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 03:35 boinc_mmap_file
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas        29 Nov 28 03:35 wrapper_checkpoint.txt
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas       353 Nov 28 03:35 output.list
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas       620 Nov 28 03:35 runtime_log
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas   5898240 Nov 28 03:35 result.tar.gz
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas      9345 Nov 28 03:35 runtime_log.err
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas       670 Nov 28 03:35 kTWNDmtJMi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5vJKDmEuGmvn.diag
[2025-11-28 03:35:10] -rw-r--r-- 1 boincer umatlas     21092 Nov 28 03:35 stderr.txt
[2025-11-28 03:35:10] HITS file was successfully produced:
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas 926371745 Nov 28 03:33 shared/HITS.pool.root.1
[2025-11-28 03:35:10]  *** Contents of shared directory: ***
[2025-11-28 03:35:10] total 1312236
[2025-11-28 03:35:10] -rw-r--r-- 2 boincer umatlas 410844293 Nov 27 20:16 ATLAS.root_0
[2025-11-28 03:35:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 20:16 start_atlas.sh
[2025-11-28 03:35:10] -rw-r--r-- 2 boincer umatlas    590106 Nov 27 20:16 input.tar.gz
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas 926371745 Nov 28 03:33 HITS.pool.root.1
[2025-11-28 03:35:10] -rw------- 1 boincer umatlas   5898240 Nov 28 03:35 result.tar.gz
03:35:12 (13970): run_atlas exited; CPU time 292769.870245
03:35:12 (13970): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN