Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
17:34:04 (2685617): wrapper (7.7.26015): starting
17:34:04 (2685617): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 17:34:04] Arguments: --nthreads 4
[2025-11-27 17:34:04] Threads: 4
[2025-11-27 17:34:04] Checking for CVMFS
[2025-11-27 17:34:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 17:34:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 17:34:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 17:34:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 17:34:04] 2.13.2.0 774864 6353 58700 153391 2 81 3556180 4096001 5105 130560 0 18553291 99.967 657427 1276 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 17:34:04] CVMFS is ok
[2025-11-27 17:34:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 17:34:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 17:34:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 17:34:04] Further information can be found at the LHC@home message board.
[2025-11-27 17:34:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 17:34:04] Checking for apptainer binary...
[2025-11-27 17:34:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 17:34:04] Running /usr/bin/apptainer --version
[2025-11-27 17:34:04] apptainer version 1.4.3
[2025-11-27 17:34:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 17:34:04] msi670e
[2025-11-27 17:34:04] apptainer works
[2025-11-27 17:34:04] Set ATHENA_PROC_NUMBER=4
[2025-11-27 17:34:04] Set ATHENA_CORE_NUMBER=4
[2025-11-27 17:34:04] Starting ATLAS job with PandaID=6898214491
[2025-11-27 17:34:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:22:58]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:22:58] 2025-11-28 07:22:17,915 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-28 00:22:58] 2025-11-28 07:22:18,636 | INFO     | monitor loop #1855: job 0:6898214491 is in state 'finished'
[2025-11-28 00:22:58] 2025-11-28 07:22:18,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,717 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 00:22:58] 2025-11-28 07:22:19,720 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4956.98559375
[2025-11-28 00:22:58] 2025-11-28 07:22:19,722 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6898214491/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,723 | INFO     | extracted standard info from prmon json
[2025-11-28 00:22:58] 2025-11-28 07:22:19,723 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 00:22:58] 2025-11-28 07:22:19,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 00:22:58] 2025-11-28 07:22:19,726 | INFO     | fitting pss+swap vs Time
[2025-11-28 00:22:58] 2025-11-28 07:22:19,726 | INFO     | sum of square deviations: 19994421400.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,728 | INFO     | sum of deviations: 78069860031.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,728 | INFO     | mean x: 1764302270.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,728 | INFO     | mean y: 2270970.9201995013
[2025-11-28 00:22:58] 2025-11-28 07:22:19,728 | INFO     | intersect: -6886592103.220849
[2025-11-28 00:22:58] 2025-11-28 07:22:19,729 | INFO     | chi2: 2.437796958724082
[2025-11-28 00:22:58] 2025-11-28 07:22:19,729 | INFO     | sum of square deviations: 19255784295.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,730 | INFO     | sum of deviations: 111924775973.00003
[2025-11-28 00:22:58] 2025-11-28 07:22:19,731 | INFO     | mean x: 1764302117.5
[2025-11-28 00:22:58] 2025-11-28 07:22:19,731 | INFO     | mean y: 2277904.3585858587
[2025-11-28 00:22:58] 2025-11-28 07:22:19,731 | INFO     | intersect: -10252776692.464685
[2025-11-28 00:22:58] 2025-11-28 07:22:19,731 | INFO     | chi2: 1.5906610985612066
[2025-11-28 00:22:58] 2025-11-28 07:22:19,731 | INFO     | current chi2=1.5906610985612066 (change=34.75005812650851 %)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,731 | INFO     | sum of square deviations: 18535566140.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,733 | INFO     | sum of deviations: 108814651750.00012
[2025-11-28 00:22:58] 2025-11-28 07:22:19,733 | INFO     | mean x: 1764301965.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,733 | INFO     | mean y: 2277245.8363171355
[2025-11-28 00:22:58] 2025-11-28 07:22:19,733 | INFO     | intersect: -10355210756.05516
[2025-11-28 00:22:58] 2025-11-28 07:22:19,733 | INFO     | chi2: 1.5909750592070933
[2025-11-28 00:22:58] 2025-11-28 07:22:19,733 | INFO     | current chi2=1.5909750592070933 (change=-0.019737745907698966 %)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,733 | INFO     | right removable region: 390
[2025-11-28 00:22:58] 2025-11-28 07:22:19,733 | INFO     | sum of square deviations: 19255784295.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,735 | INFO     | sum of deviations: 20018832502.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,735 | INFO     | mean x: 1764302422.5
[2025-11-28 00:22:58] 2025-11-28 07:22:19,735 | INFO     | mean y: 2282886.777777778
[2025-11-28 00:22:58] 2025-11-28 07:22:19,735 | INFO     | intersect: -1831933478.4352152
[2025-11-28 00:22:58] 2025-11-28 07:22:19,735 | INFO     | chi2: 0.9346541393005607
[2025-11-28 00:22:58] 2025-11-28 07:22:19,735 | INFO     | current chi2=0.9346541393005607 (change=61.659885744145434 %)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,735 | INFO     | sum of square deviations: 18535566140.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,737 | INFO     | sum of deviations: 19235237543.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,737 | INFO     | mean x: 1764302575.0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,737 | INFO     | mean y: 2283050.8746803068
[2025-11-28 00:22:58] 2025-11-28 07:22:19,737 | INFO     | intersect: -1828617547.0097053
[2025-11-28 00:22:58] 2025-11-28 07:22:19,737 | INFO     | chi2: 0.9342499279100394
[2025-11-28 00:22:58] 2025-11-28 07:22:19,737 | INFO     | current chi2=0.9342499279100394 (change=0.04324716208113819 %)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,737 | INFO     | left removable region: 20
[2025-11-28 00:22:58] 2025-11-28 07:22:19,737 | INFO     | sum of square deviations: 15706536352.5
[2025-11-28 00:22:58] 2025-11-28 07:22:19,739 | INFO     | sum of deviations: 52928567473.999985
[2025-11-28 00:22:58] 2025-11-28 07:22:19,739 | INFO     | mean x: 1764302544.5
[2025-11-28 00:22:58] 2025-11-28 07:22:19,739 | INFO     | mean y: 2289075.410810811
[2025-11-28 00:22:58] 2025-11-28 07:22:19,739 | INFO     | intersect: -5943134165.930018
[2025-11-28 00:22:58] 2025-11-28 07:22:19,739 | INFO     | chi2: 0.06964606395201539
[2025-11-28 00:22:58] 2025-11-28 07:22:19,739 | INFO     | current memory leak: 3.37 B/s (using 370 data points, chi2=0.07)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,739 | INFO     | could have reported an average CPU frequency of 4923 MHz (17 samples)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | ..............................
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | . Timing measurements:
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | . get job = 0 s
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | . initial setup = 2 s
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | . payload setup = 2 s
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | . stage-in = 0 s
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | . payload execution = 24455 s
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | . stage-out = 6 s
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | . log creation = 0 s
[2025-11-28 00:22:58] 2025-11-28 07:22:19,740 | INFO     | ..............................
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | 
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | job summary report
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | --------------------------------------------------
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | PanDA job id: 6898214491
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | task id: 47556173
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | errors: (none)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | pilot state: finished 
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | transexitcode: 0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | exeerrorcode: 0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | exeerrordiag: 
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | exitcode: 0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | exitmsg: OK
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | cpuconsumptiontime: 97070 s
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | nevents: 1000
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | neventsw: 0
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | pid: 2696217
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | pgrp: 2696217
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | corecount: 4
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | event service: False
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | sizes: {0: 2284271, 2: 2284533, 11: 2284561, 24462: 2321024, 24468: 2330032, 24471: 2330088, 24475: 2330526}
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | --------------------------------------------------
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | 
[2025-11-28 00:22:58] 2025-11-28 07:22:19,780 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,794 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 00:22:58] 2025-11-28 07:22:19,794 | INFO     | job 6898214491 has completed (purged errors)
[2025-11-28 00:22:58] 2025-11-28 07:22:19,794 | INFO     | overall cleanup function is called
[2025-11-28 00:22:58] 2025-11-28 07:22:20,803 | INFO     | --- collectZombieJob: --- 10, [2696217]
[2025-11-28 00:22:58] 2025-11-28 07:22:20,803 | INFO     | zombie collector waiting for pid 2696217
[2025-11-28 00:22:58] 2025-11-28 07:22:20,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 00:22:58] 2025-11-28 07:22:20,803 | INFO     | collected zombie processes
[2025-11-28 00:22:58] 2025-11-28 07:22:20,803 | INFO     | will attempt to kill all subprocesses of pid=2696217
[2025-11-28 00:22:58] 2025-11-28 07:22:20,888 | INFO     | process IDs to be killed: [2696217] (in reverse order)
[2025-11-28 00:22:58] 2025-11-28 07:22:20,925 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 00:22:58] 2025-11-28 07:22:20,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 00:22:58] 2025-11-28 07:22:20,928 | INFO     | did not find any defunct processes belonging to 2696217
[2025-11-28 00:22:58] 2025-11-28 07:22:20,931 | INFO     | did not find any defunct processes belonging to 2696217
[2025-11-28 00:22:58] 2025-11-28 07:22:20,931 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 00:22:58] 2025-11-28 07:22:20,932 | INFO     | ready for new job
[2025-11-28 00:22:58] 2025-11-28 07:22:20,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 00:22:58] 2025-11-28 07:22:20,933 | INFO     | ***************************************
[2025-11-28 00:22:58] 2025-11-28 07:22:20,933 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:22:58] 2025-11-28 07:22:20,933 | INFO     | ***************************************
[2025-11-28 00:22:58] 2025-11-28 07:22:20,933 | INFO     | 
[2025-11-28 00:22:58] 2025-11-28 07:22:20,934 | INFO     | architecture information:
[2025-11-28 00:22:58] 2025-11-28 07:22:20,934 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:22:58] 2025-11-28 07:22:20,943 | INFO     | cat /etc/os-release:
[2025-11-28 00:22:58] NAME="CentOS Linux"
[2025-11-28 00:22:58] VERSION="7 (Core)"
[2025-11-28 00:22:58] ID="centos"
[2025-11-28 00:22:58] ID_LIKE="rhel fedora"
[2025-11-28 00:22:58] VERSION_ID="7"
[2025-11-28 00:22:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:22:58] ANSI_COLOR="0;31"
[2025-11-28 00:22:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:22:58] HOME_URL="https://www.centos.org/"
[2025-11-28 00:22:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:22:58] 
[2025-11-28 00:22:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:22:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:22:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:22:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:22:58] 
[2025-11-28 00:22:58] 2025-11-28 07:22:20,943 | INFO     | ***************************************
[2025-11-28 00:22:58] 2025-11-28 07:22:21,445 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-28 00:22:58] 2025-11-28 07:22:21,456 | INFO     | sufficient remaining disk space (436771749888 B)
[2025-11-28 00:22:58] 2025-11-28 07:22:21,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:22:58] 2025-11-28 07:22:21,456 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:22:58] 2025-11-28 07:22:21,456 | INFO     | update_server=False
[2025-11-28 00:22:58] 2025-11-28 07:22:21,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:22:58] 2025-11-28 07:22:21,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:22:58] 2025-11-28 07:22:21,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:22:58] 2025-11-28 07:22:21,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:22:58] 2025-11-28 07:22:21,587 | INFO     | all job control threads have been joined
[2025-11-28 00:22:58] 2025-11-28 07:22:22,056 | INFO     | all data control threads have been joined
[2025-11-28 00:22:58] 2025-11-28 07:22:22,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:22:58] 2025-11-28 07:22:22,144 | INFO     | aborting loop
[2025-11-28 00:22:58] 2025-11-28 07:22:22,268 | INFO     | all payload control threads have been joined
[2025-11-28 00:22:58] 2025-11-28 07:22:22,459 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:22,461 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:22,592 | INFO     | [job] control thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:22,997 | INFO     | [job] validate thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,061 | INFO     | [data] control thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,149 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,156 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,178 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,273 | INFO     | [payload] control thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,461 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,523 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,750 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,873 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,933 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:23,964 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:25,504 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:22:58] 2025-11-28 07:22:50,987 | INFO     | PID=2689482 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 00:22:58] 2025-11-28 07:22:50,987 | INFO     | .. there are 7 such processes running
[2025-11-28 00:22:58] 2025-11-28 07:22:50,987 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:22:58] 2025-11-28 07:22:50,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:22:58] 2025-11-28 07:22:50,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:22:58] 2025-11-28 07:22:51,528 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:22:58] 2025-11-28 07:22:52,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605991401280)>', '<ExcThread(monitor, started 140605250320128)>']
[2025-11-28 00:22:58] 2025-11-28 07:22:52,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:22:58] 2025-11-28 07:22:52,997 | INFO     | [monitor] control thread has ended
[2025-11-28 00:22:58] 2025-11-28 07:22:57,906 | INFO     | all workflow threads have been joined
[2025-11-28 00:22:58] 2025-11-28 07:22:57,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:22:58] 2025-11-28 07:22:57,906 | INFO     | traces error code: 0
[2025-11-28 00:22:58] 2025-11-28 07:22:57,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:22:58] 2025-11-28 07:22:57,963 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:22:58] 2025-11-28 07:22:57,965 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:22:58] 2025-11-28 07:22:57,967 [wrapper] pilotpid: 2689482
[2025-11-28 00:22:58] 2025-11-28 07:22:57,968 [wrapper] Pilot exit status: 0
[2025-11-28 00:22:58] 2025-11-28 07:22:57,973 [wrapper] pandaids: 6898214491
[2025-11-28 00:22:58] 2025-11-28 07:22:57,998 [wrapper] cleanup supervisor_pilot 3069111 2689483
[2025-11-28 00:22:58] 2025-11-28 07:22:57,999 [wrapper] Test setup, not cleaning
[2025-11-28 00:22:58] 2025-11-28 07:22:58,001 [wrapper] apfmon messages muted
[2025-11-28 00:22:58] 2025-11-28 07:22:58,002 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:22:58] 2025-11-28 07:22:58,004 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:22:58]  *** Error codes and diagnostics ***
[2025-11-28 00:22:58]     "exeErrorCode": 0,
[2025-11-28 00:22:58]     "exeErrorDiag": "",
[2025-11-28 00:22:58]     "pilotErrorCode": 0,
[2025-11-28 00:22:58]     "pilotErrorDiag": "",
[2025-11-28 00:22:58]  *** Listing of results directory ***
[2025-11-28 00:22:58] total 1317108
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc    576529 Nov 25 21:39 pilot3.tar.gz
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc      5112 Nov 25 21:42 queuedata.json
[2025-11-28 00:22:58] -rwx------ 1 boinc boinc     36292 Nov 25 21:42 runpilot2-wrapper.sh
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc       100 Nov 27 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:22:58] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 17:34 run_atlas
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc       105 Nov 27 17:34 job.xml
[2025-11-28 00:22:58] -rw-r--r-- 2 boinc boinc 409655032 Nov 27 17:34 EVNT.47483658._003182.pool.root.1
[2025-11-28 00:22:58] -rw-r--r-- 2 boinc boinc     15847 Nov 27 17:34 start_atlas.sh
[2025-11-28 00:22:58] drwxrwx--x 2 boinc boinc      4096 Nov 27 17:34 shared
[2025-11-28 00:22:58] -rw-r--r-- 2 boinc boinc    590103 Nov 27 17:34 input.tar.gz
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc      9949 Nov 27 17:34 init_data.xml
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc         0 Nov 27 17:34 boinc_lockfile
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc      2785 Nov 27 17:34 pandaJob.out
[2025-11-28 00:22:58] -rw------- 1 boinc boinc    991826 Nov 27 17:34 agis_schedconf.cvmfs.json
[2025-11-28 00:22:58] drwx------ 5 boinc boinc      4096 Nov 27 17:34 pilot3
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc       532 Nov 28 00:19 boinc_task_state.xml
[2025-11-28 00:22:58] -rw------- 1 boinc boinc 925538211 Nov 28 00:21 HITS.47556173._001382.pool.root.1
[2025-11-28 00:22:58] -rw------- 1 boinc boinc      1031 Nov 28 00:22 memory_monitor_summary.json
[2025-11-28 00:22:58] -rw------- 1 boinc boinc        95 Nov 28 00:22 pilot_heartbeat.json
[2025-11-28 00:22:58] -rw------- 1 boinc boinc   1516240 Nov 28 00:22 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:22:58] -rw------- 1 boinc boinc   1248692 Nov 28 00:22 log.47556173._001382.job.log.tgz.1
[2025-11-28 00:22:58] -rw------- 1 boinc boinc      8549 Nov 28 00:22 heartbeat.json
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc        28 Nov 28 00:22 wrapper_checkpoint.txt
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc      8192 Nov 28 00:22 boinc_mmap_file
[2025-11-28 00:22:58] -rw------- 1 boinc boinc      4831 Nov 28 00:22 pilotlog.txt
[2025-11-28 00:22:58] -rw------- 1 boinc boinc   3550558 Nov 28 00:22 log.47556173._001382.job.log.1
[2025-11-28 00:22:58] -rw------- 1 boinc boinc       353 Nov 28 00:22 output.list
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc       620 Nov 28 00:22 runtime_log
[2025-11-28 00:22:58] -rw------- 1 boinc boinc   4823040 Nov 28 00:22 result.tar.gz
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc      8920 Nov 28 00:22 runtime_log.err
[2025-11-28 00:22:58] -rw------- 1 boinc boinc       660 Nov 28 00:22 kC7LDmuXMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxyMKDmdJiSLm.diag
[2025-11-28 00:22:58] -rw-r--r-- 1 boinc boinc     21438 Nov 28 00:22 stderr.txt
[2025-11-28 00:22:58] HITS file was successfully produced:
[2025-11-28 00:22:58] -rw------- 1 boinc boinc 925538211 Nov 28 00:21 shared/HITS.pool.root.1
[2025-11-28 00:22:58]  *** Contents of shared directory: ***
[2025-11-28 00:22:58] total 1309220
[2025-11-28 00:22:58] -rw-r--r-- 2 boinc boinc 409655032 Nov 27 17:34 ATLAS.root_0
[2025-11-28 00:22:58] -rw-r--r-- 2 boinc boinc     15847 Nov 27 17:34 start_atlas.sh
[2025-11-28 00:22:58] -rw-r--r-- 2 boinc boinc    590103 Nov 27 17:34 input.tar.gz
[2025-11-28 00:22:58] -rw------- 1 boinc boinc 925538211 Nov 28 00:21 HITS.pool.root.1
[2025-11-28 00:22:58] -rw------- 1 boinc boinc   4823040 Nov 28 00:22 result.tar.gz
00:22:59 (2685617): run_atlas exited; CPU time 97039.802805
00:22:59 (2685617): called boinc_finish(0)

</stderr_txt>
]]>

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