Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:55:06 (25559): wrapper (7.7.26015): starting
17:55:06 (25559): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 17:55:06] Arguments: --nthreads 8
[2025-11-27 17:55:06] Threads: 8
[2025-11-27 17:55:06] Checking for CVMFS
[2025-11-27 17:55:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 17:55:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 17:55:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 17:55:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 17:55:07] 2.11.2.0 2966 6928 72620 153387 1 83 10548992 20275201 1 130560 0 2397258 99.978 262539 37699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 17:55:07] CVMFS is ok
[2025-11-27 17:55:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 17:55:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 17:55:07] Further information can be found at the LHC@home message board.
[2025-11-27 17:55:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 17:55:07] Checking for apptainer binary...
[2025-11-27 17:55:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 17:55:07] Running /usr/bin/apptainer --version
[2025-11-27 17:55:07] apptainer version 1.3.2-1.el7
[2025-11-27 17:55:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 17:55:08] c-204-25.aglt2.org
[2025-11-27 17:55:08] apptainer works
[2025-11-27 17:55:08] Set ATHENA_PROC_NUMBER=8
[2025-11-27 17:55:08] Set ATHENA_CORE_NUMBER=8
[2025-11-27 17:55:08] Starting ATLAS job with PandaID=6891584960
[2025-11-27 17:55:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 06:25:53]  *** The last 200 lines of the pilot log: ***
[2025-11-28 06:25:53] 2025-11-28 11:25:33,144 | INFO     | monitor loop #3304: job 0:6891584960 is in state 'finished'
[2025-11-28 06:25:53] 2025-11-28 11:25:33,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,075 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 06:25:53] 2025-11-28 11:25:34,078 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-28 06:25:53] 2025-11-28 11:25:34,080 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891584960/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,081 | INFO     | extracted standard info from prmon json
[2025-11-28 06:25:53] 2025-11-28 11:25:34,081 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 06:25:53] 2025-11-28 11:25:34,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 06:25:53] 2025-11-28 11:25:34,094 | INFO     | fitting pss+swap vs Time
[2025-11-28 06:25:53] 2025-11-28 11:25:34,095 | INFO     | sum of square deviations: 124636997318.39026
[2025-11-28 06:25:53] 2025-11-28 11:25:34,106 | INFO     | sum of deviations: 804930288875.0808
[2025-11-28 06:25:53] 2025-11-28 11:25:34,107 | INFO     | mean x: 1764306636.1544716
[2025-11-28 06:25:53] 2025-11-28 11:25:34,107 | INFO     | mean y: 3315922.8238482387
[2025-11-28 06:25:53] 2025-11-28 11:25:34,107 | INFO     | intersect: -11390923996.774231
[2025-11-28 06:25:53] 2025-11-28 11:25:34,108 | INFO     | chi2: 7.3049297655906855
[2025-11-28 06:25:53] 2025-11-28 11:25:34,109 | INFO     | sum of square deviations: 122120995128.73384
[2025-11-28 06:25:53] 2025-11-28 11:25:34,120 | INFO     | sum of deviations: 1117837759732.7056
[2025-11-28 06:25:53] 2025-11-28 11:25:34,120 | INFO     | mean x: 1764306483.6589358
[2025-11-28 06:25:53] 2025-11-28 11:25:34,120 | INFO     | mean y: 3334888.4188267393
[2025-11-28 06:25:53] 2025-11-28 11:25:34,120 | INFO     | intersect: -16146291186.083666
[2025-11-28 06:25:53] 2025-11-28 11:25:34,121 | INFO     | chi2: 3.594810866766969
[2025-11-28 06:25:53] 2025-11-28 11:25:34,121 | INFO     | current chi2=3.594810866766969 (change=50.78924805410105 %)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,122 | INFO     | sum of square deviations: 119639086601.54819
[2025-11-28 06:25:53] 2025-11-28 11:25:34,133 | INFO     | sum of deviations: 1250629404128.1448
[2025-11-28 06:25:53] 2025-11-28 11:25:34,133 | INFO     | mean x: 1764306331.1634614
[2025-11-28 06:25:53] 2025-11-28 11:25:34,133 | INFO     | mean y: 3343043.133241758
[2025-11-28 06:25:53] 2025-11-28 11:25:34,133 | INFO     | intersect: -18439570876.72211
[2025-11-28 06:25:53] 2025-11-28 11:25:34,134 | INFO     | chi2: 2.8005466601106286
[2025-11-28 06:25:53] 2025-11-28 11:25:34,134 | INFO     | current chi2=2.8005466601106286 (change=22.09474256348486 %)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,134 | INFO     | right removable region: 727
[2025-11-28 06:25:53] 2025-11-28 11:25:34,135 | INFO     | sum of square deviations: 122120700498.73392
[2025-11-28 06:25:53] 2025-11-28 11:25:34,146 | INFO     | sum of deviations: 563921034401.4282
[2025-11-28 06:25:53] 2025-11-28 11:25:34,147 | INFO     | mean x: 1764306788.6589358
[2025-11-28 06:25:53] 2025-11-28 11:25:34,147 | INFO     | mean y: 3330504.957708049
[2025-11-28 06:25:53] 2025-11-28 11:25:34,147 | INFO     | intersect: -8143770725.208622
[2025-11-28 06:25:53] 2025-11-28 11:25:34,148 | INFO     | chi2: 4.878433238671592
[2025-11-28 06:25:53] 2025-11-28 11:25:34,148 | INFO     | current chi2=4.878433238671592 (change=33.21724650042387 %)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,149 | INFO     | sum of square deviations: 119638586524.19647
[2025-11-28 06:25:53] 2025-11-28 11:25:34,160 | INFO     | sum of deviations: 512895330732.91077
[2025-11-28 06:25:53] 2025-11-28 11:25:34,160 | INFO     | mean x: 1764306941.1607144
[2025-11-28 06:25:53] 2025-11-28 11:25:34,160 | INFO     | mean y: 3333639.633241758
[2025-11-28 06:25:53] 2025-11-28 11:25:34,160 | INFO     | intersect: -7560319679.841415
[2025-11-28 06:25:53] 2025-11-28 11:25:34,161 | INFO     | chi2: 4.829141159501192
[2025-11-28 06:25:53] 2025-11-28 11:25:34,161 | INFO     | current chi2=4.829141159501192 (change=1.0104079887710564 %)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,161 | INFO     | left removable region: 20
[2025-11-28 06:25:53] 2025-11-28 11:25:34,162 | INFO     | sum of square deviations: 109581209625.17688
[2025-11-28 06:25:53] 2025-11-28 11:25:34,173 | INFO     | sum of deviations: 896245487454.035
[2025-11-28 06:25:53] 2025-11-28 11:25:34,173 | INFO     | mean x: 1764306910.6746817
[2025-11-28 06:25:53] 2025-11-28 11:25:34,174 | INFO     | mean y: 3368288.9349363507
[2025-11-28 06:25:53] 2025-11-28 11:25:34,174 | INFO     | intersect: -14426588385.068153
[2025-11-28 06:25:53] 2025-11-28 11:25:34,174 | INFO     | chi2: 0.11911283269161732
[2025-11-28 06:25:53] 2025-11-28 11:25:34,175 | INFO     | current memory leak: 8.18 B/s (using 707 data points, chi2=0.12)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,175 | INFO     | could have reported an average CPU frequency of 2178 MHz (28 samples)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,175 | INFO     | ..............................
[2025-11-28 06:25:53] 2025-11-28 11:25:34,175 | INFO     | . Timing measurements:
[2025-11-28 06:25:53] 2025-11-28 11:25:34,176 | INFO     | . get job = 0 s
[2025-11-28 06:25:53] 2025-11-28 11:25:34,176 | INFO     | . initial setup = 2 s
[2025-11-28 06:25:53] 2025-11-28 11:25:34,176 | INFO     | . payload setup = 8 s
[2025-11-28 06:25:53] 2025-11-28 11:25:34,176 | INFO     | . stage-in = 0 s
[2025-11-28 06:25:53] 2025-11-28 11:25:34,176 | INFO     | . payload execution = 44964 s
[2025-11-28 06:25:53] 2025-11-28 11:25:34,176 | INFO     | . stage-out = 4 s
[2025-11-28 06:25:53] 2025-11-28 11:25:34,176 | INFO     | . log creation = 0 s
[2025-11-28 06:25:53] 2025-11-28 11:25:34,176 | INFO     | ..............................
[2025-11-28 06:25:53] 2025-11-28 11:25:34,447 | INFO     | time since job start (45008s) is within the limit (172800.0s)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,470 | INFO     | 
[2025-11-28 06:25:53] 2025-11-28 11:25:34,470 | INFO     | job summary report
[2025-11-28 06:25:53] 2025-11-28 11:25:34,470 | INFO     | --------------------------------------------------
[2025-11-28 06:25:53] 2025-11-28 11:25:34,470 | INFO     | PanDA job id: 6891584960
[2025-11-28 06:25:53] 2025-11-28 11:25:34,470 | INFO     | task id: 47493068
[2025-11-28 06:25:53] 2025-11-28 11:25:34,471 | INFO     | errors: (none)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 06:25:53] 2025-11-28 11:25:34,471 | INFO     | pilot state: finished 
[2025-11-28 06:25:53] 2025-11-28 11:25:34,471 | INFO     | transexitcode: 0
[2025-11-28 06:25:53] 2025-11-28 11:25:34,471 | INFO     | exeerrorcode: 0
[2025-11-28 06:25:53] 2025-11-28 11:25:34,471 | INFO     | exeerrordiag: 
[2025-11-28 06:25:53] 2025-11-28 11:25:34,471 | INFO     | exitcode: 0
[2025-11-28 06:25:53] 2025-11-28 11:25:34,471 | INFO     | exitmsg: OK
[2025-11-28 06:25:53] 2025-11-28 11:25:34,472 | INFO     | cpuconsumptiontime: 348731 s
[2025-11-28 06:25:53] 2025-11-28 11:25:34,472 | INFO     | nevents: 1000
[2025-11-28 06:25:53] 2025-11-28 11:25:34,472 | INFO     | neventsw: 0
[2025-11-28 06:25:53] 2025-11-28 11:25:34,472 | INFO     | pid: 3965
[2025-11-28 06:25:53] 2025-11-28 11:25:34,472 | INFO     | pgrp: 3965
[2025-11-28 06:25:53] 2025-11-28 11:25:34,472 | INFO     | corecount: 8
[2025-11-28 06:25:53] 2025-11-28 11:25:34,472 | INFO     | event service: False
[2025-11-28 06:25:53] 2025-11-28 11:25:34,472 | INFO     | sizes: {0: 2284077, 1: 2284332, 7: 2284594, 12: 2284622, 44976: 2330536, 44981: 2339530, 44983: 2339714, 44991: 2339960}
[2025-11-28 06:25:53] 2025-11-28 11:25:34,473 | INFO     | --------------------------------------------------
[2025-11-28 06:25:53] 2025-11-28 11:25:34,473 | INFO     | 
[2025-11-28 06:25:53] 2025-11-28 11:25:34,473 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 06:25:53] 2025-11-28 11:25:34,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 06:25:53] 2025-11-28 11:25:34,507 | INFO     | job 6891584960 has completed (purged errors)
[2025-11-28 06:25:53] 2025-11-28 11:25:34,507 | INFO     | overall cleanup function is called
[2025-11-28 06:25:53] 2025-11-28 11:25:35,523 | INFO     | --- collectZombieJob: --- 10, [3965]
[2025-11-28 06:25:53] 2025-11-28 11:25:35,523 | INFO     | zombie collector waiting for pid 3965
[2025-11-28 06:25:53] 2025-11-28 11:25:35,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 06:25:53] 2025-11-28 11:25:35,524 | INFO     | collected zombie processes
[2025-11-28 06:25:53] 2025-11-28 11:25:35,524 | INFO     | will attempt to kill all subprocesses of pid=3965
[2025-11-28 06:25:53] 2025-11-28 11:25:35,619 | INFO     | process IDs to be killed: [3965] (in reverse order)
[2025-11-28 06:25:53] 2025-11-28 11:25:35,681 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 06:25:53] 2025-11-28 11:25:35,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 06:25:53] 2025-11-28 11:25:35,686 | INFO     | did not find any defunct processes belonging to 3965
[2025-11-28 06:25:53] 2025-11-28 11:25:35,689 | INFO     | did not find any defunct processes belonging to 3965
[2025-11-28 06:25:53] 2025-11-28 11:25:35,692 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 06:25:53] 2025-11-28 11:25:35,692 | INFO     | ready for new job
[2025-11-28 06:25:53] 2025-11-28 11:25:35,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 06:25:53] 2025-11-28 11:25:35,696 | INFO     | ***************************************
[2025-11-28 06:25:53] 2025-11-28 11:25:35,696 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 06:25:53] 2025-11-28 11:25:35,697 | INFO     | ***************************************
[2025-11-28 06:25:53] 2025-11-28 11:25:35,697 | INFO     | 
[2025-11-28 06:25:53] 2025-11-28 11:25:35,697 | INFO     | architecture information:
[2025-11-28 06:25:53] 2025-11-28 11:25:35,698 | INFO     | executing command: cat /etc/os-release
[2025-11-28 06:25:53] 2025-11-28 11:25:35,716 | INFO     | cat /etc/os-release:
[2025-11-28 06:25:53] NAME="CentOS Linux"
[2025-11-28 06:25:53] VERSION="7 (Core)"
[2025-11-28 06:25:53] ID="centos"
[2025-11-28 06:25:53] ID_LIKE="rhel fedora"
[2025-11-28 06:25:53] VERSION_ID="7"
[2025-11-28 06:25:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 06:25:53] ANSI_COLOR="0;31"
[2025-11-28 06:25:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 06:25:53] HOME_URL="https://www.centos.org/"
[2025-11-28 06:25:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 06:25:53] 
[2025-11-28 06:25:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 06:25:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 06:25:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 06:25:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 06:25:53] 
[2025-11-28 06:25:53] 2025-11-28 11:25:35,717 | INFO     | ***************************************
[2025-11-28 06:25:53] 2025-11-28 11:25:36,220 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 06:25:53] 2025-11-28 11:25:36,241 | INFO     | sufficient remaining disk space (17430478848 B)
[2025-11-28 06:25:53] 2025-11-28 11:25:36,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 06:25:53] 2025-11-28 11:25:36,242 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 06:25:53] 2025-11-28 11:25:36,242 | INFO     | update_server=False
[2025-11-28 06:25:53] 2025-11-28 11:25:36,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 06:25:53] 2025-11-28 11:25:36,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:25:53] 2025-11-28 11:25:36,243 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-28 06:25:53] 2025-11-28 11:25:36,243 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 06:25:53] 2025-11-28 11:25:36,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 06:25:53] 2025-11-28 11:25:36,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 06:25:53] 2025-11-28 11:25:36,279 | INFO     | all payload control threads have been joined
[2025-11-28 06:25:53] 2025-11-28 11:25:36,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 06:25:53] 2025-11-28 11:25:36,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:25:53] 2025-11-28 11:25:36,662 | INFO     | aborting loop
[2025-11-28 06:25:53] 2025-11-28 11:25:36,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 06:25:53] 2025-11-28 11:25:37,181 | INFO     | all data control threads have been joined
[2025-11-28 06:25:53] 2025-11-28 11:25:37,248 | INFO     | [job] retrieve thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:37,248 | INFO     | [job] queue monitor thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:37,284 | INFO     | [payload] control thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:37,440 | INFO     | all job control threads have been joined
[2025-11-28 06:25:53] 2025-11-28 11:25:37,668 | INFO     | [job] job monitor thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:37,815 | INFO     | [job] validate thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:37,828 | INFO     | [data] copytool_in thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:37,858 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:37,984 | INFO     | [payload] validate_post thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:38,186 | INFO     | [data] control thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:38,285 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:38,427 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:38,445 | INFO     | [job] control thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:38,715 | INFO     | [payload] failed_post thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:38,782 | INFO     | [data] copytool_out thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:40,267 | INFO     | [monitor] cgroup control has ended
[2025-11-28 06:25:53] 2025-11-28 11:25:40,301 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:46,875 | INFO     | job.realtimelogging is not enabled
[2025-11-28 06:25:53] 2025-11-28 11:25:47,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 06:25:53] 2025-11-28 11:25:48,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771471075136)>', '<ExcThread(monitor, started 139771003246336)>']
[2025-11-28 06:25:53] 2025-11-28 11:25:49,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 06:25:53] 2025-11-28 11:25:49,302 | INFO     | [monitor] control thread has ended
[2025-11-28 06:25:53] 2025-11-28 11:25:53,344 | INFO     | all workflow threads have been joined
[2025-11-28 06:25:53] 2025-11-28 11:25:53,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 06:25:53] 2025-11-28 11:25:53,345 | INFO     | traces error code: 0
[2025-11-28 06:25:53] 2025-11-28 11:25:53,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 06:25:53] 2025-11-28 11:25:53,447 [wrapper] ==== pilot stdout END ====
[2025-11-28 06:25:53] 2025-11-28 11:25:53,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 06:25:53] 2025-11-28 11:25:53,456 [wrapper] pilotpid: 29273
[2025-11-28 06:25:53] 2025-11-28 11:25:53,461 [wrapper] Pilot exit status: 0
[2025-11-28 06:25:53] 2025-11-28 11:25:53,478 [wrapper] pandaids: 6891584960
[2025-11-28 06:25:53] 2025-11-28 11:25:53,522 [wrapper] cleanup supervisor_pilot 13129 29274
[2025-11-28 06:25:53] 2025-11-28 11:25:53,527 [wrapper] Test setup, not cleaning
[2025-11-28 06:25:53] 2025-11-28 11:25:53,532 [wrapper] apfmon messages muted
[2025-11-28 06:25:53] 2025-11-28 11:25:53,536 [wrapper] ==== wrapper stdout END ====
[2025-11-28 06:25:53] 2025-11-28 11:25:53,541 [wrapper] ==== wrapper stderr END ====
[2025-11-28 06:25:53]  *** Error codes and diagnostics ***
[2025-11-28 06:25:53]     "exeErrorCode": 0,
[2025-11-28 06:25:53]     "exeErrorDiag": "",
[2025-11-28 06:25:53]     "pilotErrorCode": 0,
[2025-11-28 06:25:53]     "pilotErrorDiag": "",
[2025-11-28 06:25:53]  *** Listing of results directory ***
[2025-11-28 06:25:53] total 1324200
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-28 06:25:53] -rwx------ 1 boincer umatlas     36292 Nov 18 12:25 runpilot2-wrapper.sh
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 12:25 queuedata.json
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas       100 Nov 27 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 06:25:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 17:55 run_atlas
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas       105 Nov 27 17:55 job.xml
[2025-11-28 06:25:53] -rw-r--r-- 2 boincer umatlas 408860590 Nov 27 17:55 EVNT.47493065._000472.pool.root.1
[2025-11-28 06:25:53] -rw-r--r-- 2 boincer umatlas     15120 Nov 27 17:55 start_atlas.sh
[2025-11-28 06:25:53] drwxrwx--x 2 boincer umatlas      4096 Nov 27 17:55 shared
[2025-11-28 06:25:53] -rw-r--r-- 2 boincer umatlas    590099 Nov 27 17:55 input.tar.gz
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas         0 Nov 27 17:55 boinc_lockfile
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas      2773 Nov 27 17:55 pandaJob.out
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas    991532 Nov 27 17:55 agis_schedconf.cvmfs.json
[2025-11-28 06:25:53] drwx------ 5 boincer umatlas      4096 Nov 27 17:55 pilot3
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas       533 Nov 28 06:13 boinc_task_state.xml
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas      5913 Nov 28 06:22 init_data.xml
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas        95 Nov 28 06:24 pilot_heartbeat.json
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas 926833341 Nov 28 06:24 HITS.47493068._004719.pool.root.1
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas      1063 Nov 28 06:25 memory_monitor_summary.json
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas   1516240 Nov 28 06:25 agis_ddmendpoints.agis.ALL.json
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas   1986895 Nov 28 06:25 log.47493068._004719.job.log.tgz.1
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas      8672 Nov 28 06:25 heartbeat.json
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas        29 Nov 28 06:25 wrapper_checkpoint.txt
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 06:25 boinc_mmap_file
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas      4624 Nov 28 06:25 pilotlog.txt
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas   6196675 Nov 28 06:25 log.47493068._004719.job.log.1
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas       353 Nov 28 06:25 output.list
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas       620 Nov 28 06:25 runtime_log
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas   8202240 Nov 28 06:25 result.tar.gz
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas      8704 Nov 28 06:25 runtime_log.err
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas       668 Nov 28 06:25 1hhMDmSdef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV2FKDmb5u1rn.diag
[2025-11-28 06:25:53] -rw-r--r-- 1 boincer umatlas     21202 Nov 28 06:25 stderr.txt
[2025-11-28 06:25:53] HITS file was successfully produced:
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas 926833341 Nov 28 06:24 shared/HITS.pool.root.1
[2025-11-28 06:25:53]  *** Contents of shared directory: ***
[2025-11-28 06:25:53] total 1313008
[2025-11-28 06:25:53] -rw-r--r-- 2 boincer umatlas 408860590 Nov 27 17:55 ATLAS.root_0
[2025-11-28 06:25:53] -rw-r--r-- 2 boincer umatlas     15120 Nov 27 17:55 start_atlas.sh
[2025-11-28 06:25:53] -rw-r--r-- 2 boincer umatlas    590099 Nov 27 17:55 input.tar.gz
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas 926833341 Nov 28 06:24 HITS.pool.root.1
[2025-11-28 06:25:53] -rw------- 1 boincer umatlas   8202240 Nov 28 06:25 result.tar.gz
06:25:55 (25559): run_atlas exited; CPU time 346588.500055
06:25:55 (25559): called boinc_finish(0)

</stderr_txt>
]]>

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