Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:39:43 (772733): wrapper (7.7.26015): starting
17:39:43 (772733): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 17:39:43] Arguments: --nthreads 8
[2025-11-27 17:39:43] Threads: 8
[2025-11-27 17:39:43] Checking for CVMFS
[2025-11-27 17:39:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 17:39:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 17:39:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 17:39:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 17:39:45] 2.13.2.0 6869 38678 164424 153387 0 351 33770382 40960000 20769 16776704 0 78097808 99.776 44111399 42380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 17:39:45] CVMFS is ok
[2025-11-27 17:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 17:39:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 17:39:45] Further information can be found at the LHC@home message board.
[2025-11-27 17:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 17:39:45] Checking for apptainer binary...
[2025-11-27 17:39:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 17:39:45] Running /usr/bin/apptainer --version
[2025-11-27 17:39:45] apptainer version 1.4.4-1.el9
[2025-11-27 17:39:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 17:39:46] c-212-13.aglt2.org
[2025-11-27 17:39:46] apptainer works
[2025-11-27 17:39:46] Set ATHENA_PROC_NUMBER=8
[2025-11-27 17:39:46] Set ATHENA_CORE_NUMBER=8
[2025-11-27 17:39:46] Starting ATLAS job with PandaID=6891592412
[2025-11-27 17:39:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 13:48:13]  *** The last 200 lines of the pilot log: ***
[2025-11-28 13:48:13] 2025-11-28 18:47:40,856 | INFO     | sum of deviations: 4383111880509.599
[2025-11-28 13:48:13] 2025-11-28 18:47:40,856 | INFO     | mean x: 1764319483.7959528
[2025-11-28 13:48:13] 2025-11-28 18:47:40,856 | INFO     | mean y: 2893027.8330522766
[2025-11-28 13:48:13] 2025-11-28 18:47:40,856 | INFO     | intersect: -14947005169.160307
[2025-11-28 13:48:13] 2025-11-28 18:47:40,857 | INFO     | chi2: 10.890284090832209
[2025-11-28 13:48:13] 2025-11-28 18:47:40,858 | INFO     | sum of square deviations: 510760657452.6875
[2025-11-28 13:48:13] 2025-11-28 18:47:40,888 | INFO     | sum of deviations: 4822452626288.913
[2025-11-28 13:48:13] 2025-11-28 18:47:40,888 | INFO     | mean x: 1764319331.3014395
[2025-11-28 13:48:13] 2025-11-28 18:47:40,888 | INFO     | mean y: 2903313.581710415
[2025-11-28 13:48:13] 2025-11-28 18:47:40,888 | INFO     | intersect: -16655283390.30526
[2025-11-28 13:48:13] 2025-11-28 18:47:40,889 | INFO     | chi2: 7.176045285157199
[2025-11-28 13:48:13] 2025-11-28 18:47:40,889 | INFO     | current chi2=7.176045285157199 (change=34.10598635164876 %)
[2025-11-28 13:48:13] 2025-11-28 18:47:40,890 | INFO     | sum of square deviations: 504301172549.18274
[2025-11-28 13:48:13] 2025-11-28 18:47:40,916 | INFO     | sum of deviations: 4857103842262.798
[2025-11-28 13:48:13] 2025-11-28 18:47:40,916 | INFO     | mean x: 1764319178.8069727
[2025-11-28 13:48:13] 2025-11-28 18:47:40,917 | INFO     | mean y: 2904127.025510204
[2025-11-28 13:48:13] 2025-11-28 18:47:40,917 | INFO     | intersect: -16989880995.887403
[2025-11-28 13:48:13] 2025-11-28 18:47:40,918 | INFO     | chi2: 6.945123700748029
[2025-11-28 13:48:13] 2025-11-28 18:47:40,918 | INFO     | current chi2=6.945123700748029 (change=3.217950489900117 %)
[2025-11-28 13:48:13] 2025-11-28 18:47:40,918 | INFO     | right removable region: 1175
[2025-11-28 13:48:13] 2025-11-28 18:47:40,919 | INFO     | sum of square deviations: 510759719882.6876
[2025-11-28 13:48:13] 2025-11-28 18:47:40,947 | INFO     | sum of deviations: 3904153706670.4937
[2025-11-28 13:48:13] 2025-11-28 18:47:40,947 | INFO     | mean x: 1764319636.3014395
[2025-11-28 13:48:13] 2025-11-28 18:47:40,947 | INFO     | mean y: 2904237.411515665
[2025-11-28 13:48:13] 2025-11-28 18:47:40,947 | INFO     | intersect: -13483231766.81351
[2025-11-28 13:48:13] 2025-11-28 18:47:40,948 | INFO     | chi2: 6.718153956755845
[2025-11-28 13:48:13] 2025-11-28 18:47:40,948 | INFO     | current chi2=6.718153956755845 (change=38.310572059259655 %)
[2025-11-28 13:48:13] 2025-11-28 18:47:40,949 | INFO     | sum of square deviations: 504299297409.1831
[2025-11-28 13:48:13] 2025-11-28 18:47:40,977 | INFO     | sum of deviations: 3523007167204.4565
[2025-11-28 13:48:13] 2025-11-28 18:47:40,977 | INFO     | mean x: 1764319788.8069727
[2025-11-28 13:48:13] 2025-11-28 18:47:40,977 | INFO     | mean y: 2913232.676020408
[2025-11-28 13:48:13] 2025-11-28 18:47:40,977 | INFO     | intersect: -12322527816.202253
[2025-11-28 13:48:13] 2025-11-28 18:47:40,978 | INFO     | chi2: 4.206326300136407
[2025-11-28 13:48:13] 2025-11-28 18:47:40,978 | INFO     | current chi2=4.206326300136407 (change=37.388658741491305 %)
[2025-11-28 13:48:13] 2025-11-28 18:47:40,979 | INFO     | sum of square deviations: 497894004423.3253
[2025-11-28 13:48:13] 2025-11-28 18:47:40,985 | INFO     | monitor loop #4707: job 0:6891592412 is in state 'finished'
[2025-11-28 13:48:13] 2025-11-28 18:47:40,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 13:48:13] 2025-11-28 18:47:40,999 | INFO     | sum of deviations: 3439372474025.2197
[2025-11-28 13:48:13] 2025-11-28 18:47:41,000 | INFO     | mean x: 1764319941.3074296
[2025-11-28 13:48:13] 2025-11-28 18:47:41,000 | INFO     | mean y: 2915223.457728437
[2025-11-28 13:48:13] 2025-11-28 18:47:41,000 | INFO     | intersect: -12184725896.131306
[2025-11-28 13:48:13] 2025-11-28 18:47:41,001 | INFO     | chi2: 4.177517236146669
[2025-11-28 13:48:13] 2025-11-28 18:47:41,001 | INFO     | current chi2=4.177517236146669 (change=0.6848984585148223 %)
[2025-11-28 13:48:13] 2025-11-28 18:47:41,001 | INFO     | left removable region: 30
[2025-11-28 13:48:13] 2025-11-28 18:47:41,002 | INFO     | sum of square deviations: 465460110170.7897
[2025-11-28 13:48:13] 2025-11-28 18:47:41,032 | INFO     | sum of deviations: 3713933130691.5757
[2025-11-28 13:48:13] 2025-11-28 18:47:41,032 | INFO     | mean x: 1764320063.3240175
[2025-11-28 13:48:13] 2025-11-28 18:47:41,032 | INFO     | mean y: 2931242.866375546
[2025-11-28 13:48:13] 2025-11-28 18:47:41,032 | INFO     | intersect: -14074680550.588099
[2025-11-28 13:48:13] 2025-11-28 18:47:41,033 | INFO     | chi2: 0.13518697379336703
[2025-11-28 13:48:13] 2025-11-28 18:47:41,033 | INFO     | current memory leak: 7.98 B/s (using 1145 data points, chi2=0.14)
[2025-11-28 13:48:13] 2025-11-28 18:47:41,034 | INFO     | could have reported an average CPU frequency of 2978 MHz (43 samples)
[2025-11-28 13:48:13] 2025-11-28 18:47:41,034 | INFO     | ..............................
[2025-11-28 13:48:13] 2025-11-28 18:47:41,034 | INFO     | . Timing measurements:
[2025-11-28 13:48:13] 2025-11-28 18:47:41,035 | INFO     | . get job = 0 s
[2025-11-28 13:48:13] 2025-11-28 18:47:41,035 | INFO     | . initial setup = 7 s
[2025-11-28 13:48:13] 2025-11-28 18:47:41,035 | INFO     | . payload setup = 32 s
[2025-11-28 13:48:13] 2025-11-28 18:47:41,035 | INFO     | . stage-in = 0 s
[2025-11-28 13:48:13] 2025-11-28 18:47:41,035 | INFO     | . payload execution = 72322 s
[2025-11-28 13:48:13] 2025-11-28 18:47:41,035 | INFO     | . stage-out = 5 s
[2025-11-28 13:48:13] 2025-11-28 18:47:41,035 | INFO     | . log creation = 1 s
[2025-11-28 13:48:13] 2025-11-28 18:47:41,035 | INFO     | ..............................
[2025-11-28 13:48:13] 2025-11-28 18:47:41,111 | INFO     | 
[2025-11-28 13:48:13] 2025-11-28 18:47:41,112 | INFO     | job summary report
[2025-11-28 13:48:13] 2025-11-28 18:47:41,112 | INFO     | --------------------------------------------------
[2025-11-28 13:48:13] 2025-11-28 18:47:41,112 | INFO     | PanDA job id: 6891592412
[2025-11-28 13:48:13] 2025-11-28 18:47:41,112 | INFO     | task id: 47493068
[2025-11-28 13:48:13] 2025-11-28 18:47:41,112 | INFO     | errors: (none)
[2025-11-28 13:48:13] 2025-11-28 18:47:41,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 13:48:13] 2025-11-28 18:47:41,112 | INFO     | pilot state: finished 
[2025-11-28 13:48:13] 2025-11-28 18:47:41,112 | INFO     | transexitcode: 0
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | exeerrorcode: 0
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | exeerrordiag: 
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | exitcode: 0
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | exitmsg: OK
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | cpuconsumptiontime: 221205 s
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | nevents: 1000
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | neventsw: 0
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | pid: 787977
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | pgrp: 787977
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | corecount: 8
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | event service: False
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 18: 2284622, 23: 2284650, 72358: 2343922, 72363: 2352916, 72364: 2352972, 72374: 2353218}
[2025-11-28 13:48:13] 2025-11-28 18:47:41,113 | INFO     | --------------------------------------------------
[2025-11-28 13:48:13] 2025-11-28 18:47:41,114 | INFO     | 
[2025-11-28 13:48:13] 2025-11-28 18:47:41,114 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-28 13:48:13] 2025-11-28 18:47:41,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,137 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 13:48:13] 2025-11-28 18:47:41,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 13:48:13] 2025-11-28 18:47:41,139 | INFO     | job 6891592412 has completed (purged errors)
[2025-11-28 13:48:13] 2025-11-28 18:47:41,139 | INFO     | overall cleanup function is called
[2025-11-28 13:48:13] 2025-11-28 18:47:42,159 | INFO     | --- collectZombieJob: --- 10, [787977]
[2025-11-28 13:48:13] 2025-11-28 18:47:42,159 | INFO     | zombie collector waiting for pid 787977
[2025-11-28 13:48:13] 2025-11-28 18:47:42,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 13:48:13] 2025-11-28 18:47:42,160 | INFO     | collected zombie processes
[2025-11-28 13:48:13] 2025-11-28 18:47:42,160 | INFO     | will attempt to kill all subprocesses of pid=787977
[2025-11-28 13:48:13] 2025-11-28 18:47:42,635 | INFO     | process IDs to be killed: [787977] (in reverse order)
[2025-11-28 13:48:13] 2025-11-28 18:47:42,767 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 13:48:13] 2025-11-28 18:47:42,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 13:48:13] 2025-11-28 18:47:42,782 | INFO     | did not find any defunct processes belonging to 787977
[2025-11-28 13:48:13] 2025-11-28 18:47:42,794 | INFO     | did not find any defunct processes belonging to 787977
[2025-11-28 13:48:13] 2025-11-28 18:47:42,795 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 13:48:13] 2025-11-28 18:47:42,796 | INFO     | ready for new job
[2025-11-28 13:48:13] 2025-11-28 18:47:42,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 13:48:13] 2025-11-28 18:47:42,802 | INFO     | ***************************************
[2025-11-28 13:48:13] 2025-11-28 18:47:42,802 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 13:48:13] 2025-11-28 18:47:42,802 | INFO     | ***************************************
[2025-11-28 13:48:13] 2025-11-28 18:47:42,802 | INFO     | 
[2025-11-28 13:48:13] 2025-11-28 18:47:42,805 | INFO     | architecture information:
[2025-11-28 13:48:13] 2025-11-28 18:47:42,806 | INFO     | executing command: cat /etc/os-release
[2025-11-28 13:48:13] 2025-11-28 18:47:42,821 | INFO     | cat /etc/os-release:
[2025-11-28 13:48:13] NAME="CentOS Linux"
[2025-11-28 13:48:13] VERSION="7 (Core)"
[2025-11-28 13:48:13] ID="centos"
[2025-11-28 13:48:13] ID_LIKE="rhel fedora"
[2025-11-28 13:48:13] VERSION_ID="7"
[2025-11-28 13:48:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 13:48:13] ANSI_COLOR="0;31"
[2025-11-28 13:48:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 13:48:13] HOME_URL="https://www.centos.org/"
[2025-11-28 13:48:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 13:48:13] 
[2025-11-28 13:48:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 13:48:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 13:48:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 13:48:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 13:48:13] 
[2025-11-28 13:48:13] 2025-11-28 18:47:42,821 | INFO     | ***************************************
[2025-11-28 13:48:13] 2025-11-28 18:47:43,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-28 13:48:13] 2025-11-28 18:47:43,358 | INFO     | sufficient remaining disk space (121322340352 B)
[2025-11-28 13:48:13] 2025-11-28 18:47:43,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 13:48:13] 2025-11-28 18:47:43,359 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 13:48:13] 2025-11-28 18:47:43,359 | INFO     | update_server=False
[2025-11-28 13:48:13] 2025-11-28 18:47:43,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 13:48:13] 2025-11-28 18:47:43,506 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 13:48:13] 2025-11-28 18:47:43,506 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 13:48:13] 2025-11-28 18:47:43,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:48:13] 2025-11-28 18:47:43,507 | INFO     | will abort loop
[2025-11-28 13:48:13] 2025-11-28 18:47:43,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 13:48:13] 2025-11-28 18:47:43,674 | INFO     | all payload control threads have been joined
[2025-11-28 13:48:13] 2025-11-28 18:47:43,922 | INFO     | all data control threads have been joined
[2025-11-28 13:48:13] 2025-11-28 18:47:44,364 | INFO     | [job] retrieve thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:44,506 | INFO     | [data] copytool_in thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:44,511 | INFO     | [job] job monitor thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:44,540 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:44,680 | INFO     | [payload] control thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:44,801 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:44,927 | INFO     | [data] control thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:45,046 | INFO     | all job control threads have been joined
[2025-11-28 13:48:13] 2025-11-28 18:47:45,508 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:45,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:45,516 | INFO     | [job] validate thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:45,533 | INFO     | [payload] failed_post thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:45,598 | INFO     | [data] copytool_out thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:45,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 13:48:13] 2025-11-28 18:47:45,725 | INFO     | [payload] validate_post thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:46,052 | INFO     | [job] control thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:46,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:48:13] 2025-11-28 18:47:47,131 | INFO     | [job] queue monitor thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:49,656 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 13:48:13] 2025-11-28 18:47:49,854 | INFO     | [monitor] cgroup control has ended
[2025-11-28 13:48:13] 2025-11-28 18:47:50,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466786428736)>', '<ExcThread(monitor, started 140466301433600)>']
[2025-11-28 13:48:13] 2025-11-28 18:47:55,448 | INFO     | all workflow threads have been joined
[2025-11-28 13:48:13] 2025-11-28 18:47:55,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 13:48:13] 2025-11-28 18:47:55,449 | INFO     | traces error code: 0
[2025-11-28 13:48:13] 2025-11-28 18:47:55,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 13:48:13] 2025-11-28 18:48:12,897 | INFO     | PID=780609 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-28 13:48:13] 2025-11-28 18:48:12,897 | INFO     | .. there are 19 such processes running
[2025-11-28 13:48:13] 2025-11-28 18:48:12,898 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 13:48:13] 2025-11-28 18:48:12,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 13:48:13] 2025-11-28 18:48:12,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 13:48:13] 2025-11-28 18:48:12,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 13:48:13] 2025-11-28 18:48:12,898 | INFO     | [monitor] control thread has ended
[2025-11-28 13:48:13] 2025-11-28 18:48:13,051 [wrapper] ==== pilot stdout END ====
[2025-11-28 13:48:13] 2025-11-28 18:48:13,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 13:48:13] 2025-11-28 18:48:13,061 [wrapper] pilotpid: 780609
[2025-11-28 13:48:13] 2025-11-28 18:48:13,066 [wrapper] Pilot exit status: 0
[2025-11-28 13:48:13] 2025-11-28 18:48:13,078 [wrapper] pandaids: 6891592412
[2025-11-28 13:48:13] 2025-11-28 18:48:13,218 [wrapper] cleanup supervisor_pilot 3660583 780610
[2025-11-28 13:48:13] 2025-11-28 18:48:13,222 [wrapper] Test setup, not cleaning
[2025-11-28 13:48:13] 2025-11-28 18:48:13,225 [wrapper] apfmon messages muted
[2025-11-28 13:48:13] 2025-11-28 18:48:13,228 [wrapper] ==== wrapper stdout END ====
[2025-11-28 13:48:13] 2025-11-28 18:48:13,231 [wrapper] ==== wrapper stderr END ====
[2025-11-28 13:48:13]  *** Error codes and diagnostics ***
[2025-11-28 13:48:13]     "exeErrorCode": 0,
[2025-11-28 13:48:13]     "exeErrorDiag": "",
[2025-11-28 13:48:13]     "pilotErrorCode": 0,
[2025-11-28 13:48:13]     "pilotErrorDiag": "",
[2025-11-28 13:48:13]  *** Listing of results directory ***
[2025-11-28 13:48:13] total 1326796
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 12:59 pilot3.tar.gz
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:23 queuedata.json
[2025-11-28 13:48:13] -rwx------. 1 boincer umatlas     36292 Nov 18 13:23 runpilot2-wrapper.sh
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas       100 Nov 27 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 13:48:13] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 17:39 run_atlas
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas       105 Nov 27 17:39 job.xml
[2025-11-28 13:48:13] -rw-r--r--. 2 boincer umatlas 409408425 Nov 27 17:39 EVNT.47493065._000647.pool.root.1
[2025-11-28 13:48:13] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 17:39 start_atlas.sh
[2025-11-28 13:48:13] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 17:39 shared
[2025-11-28 13:48:13] -rw-r--r--. 2 boincer umatlas    590093 Nov 27 17:39 input.tar.gz
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas         0 Nov 27 17:39 boinc_lockfile
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 17:39 pandaJob.out
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas    991532 Nov 27 17:40 agis_schedconf.cvmfs.json
[2025-11-28 13:48:13] drwx------. 5 boincer umatlas      4096 Nov 27 17:40 pilot3
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas      6949 Nov 28 13:37 init_data.xml
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas       533 Nov 28 13:39 boinc_task_state.xml
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas 921595060 Nov 28 13:46 HITS.47493068._005965.pool.root.1
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas      1053 Nov 28 13:47 memory_monitor_summary.json
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas   1516240 Nov 28 13:47 agis_ddmendpoints.agis.ALL.json
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas   2306410 Nov 28 13:47 log.47493068._005965.job.log.tgz.1
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas      8581 Nov 28 13:47 heartbeat.json
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 13:48 boinc_mmap_file
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas        29 Nov 28 13:48 wrapper_checkpoint.txt
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas        95 Nov 28 13:48 pilot_heartbeat.json
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas       822 Nov 28 13:48 pilotlog.txt
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas   9553471 Nov 28 13:48 log.47493068._005965.job.log.1
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas       353 Nov 28 13:48 output.list
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas       620 Nov 28 13:48 runtime_log
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas  11878400 Nov 28 13:48 result.tar.gz
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas      8704 Nov 28 13:48 runtime_log.err
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas       660 Nov 28 13:48 PE0KDm3Xff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3EGKDmiBsbdn.diag
[2025-11-28 13:48:13] -rw-r--r--. 1 boincer umatlas     21228 Nov 28 13:48 stderr.txt
[2025-11-28 13:48:13] HITS file was successfully produced:
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas 921595060 Nov 28 13:46 shared/HITS.pool.root.1
[2025-11-28 13:48:13]  *** Contents of shared directory: ***
[2025-11-28 13:48:13] total 1312016
[2025-11-28 13:48:13] -rw-r--r--. 2 boincer umatlas 409408425 Nov 27 17:39 ATLAS.root_0
[2025-11-28 13:48:13] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 17:39 start_atlas.sh
[2025-11-28 13:48:13] -rw-r--r--. 2 boincer umatlas    590093 Nov 27 17:39 input.tar.gz
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas 921595060 Nov 28 13:46 HITS.pool.root.1
[2025-11-28 13:48:13] -rw-------. 1 boincer umatlas  11878400 Nov 28 13:48 result.tar.gz
13:48:15 (772733): run_atlas exited; CPU time 221962.593264
13:48:15 (772733): called boinc_finish(0)

</stderr_txt>
]]>

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