Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:30:48 (3616839): wrapper (7.7.26015): starting
13:30:48 (3616839): wrapper: running run_atlas (--nthreads 2)
[2025-11-30 13:30:48] Arguments: --nthreads 2
[2025-11-30 13:30:48] Threads: 2
[2025-11-30 13:30:48] Checking for CVMFS
[2025-11-30 13:30:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 13:30:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 13:30:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 13:30:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 13:30:48] 2.9.2.0 1656350 16857 64768 153481 0 81 32773717 36864000 0 130560 0 5427416 99.891 880513 3082 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-30 13:30:48] CVMFS is ok
[2025-11-30 13:30:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 13:30:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 13:30:48] Further information can be found at the LHC@home message board.
[2025-11-30 13:30:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 13:30:48] Checking for apptainer binary...
[2025-11-30 13:30:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 13:30:48] Running /usr/bin/apptainer --version
[2025-11-30 13:30:48] apptainer version 1.4.1-1.1
[2025-11-30 13:30:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 13:30:48] thA314b
[2025-11-30 13:30:48] apptainer works
[2025-11-30 13:30:48] Set ATHENA_PROC_NUMBER=2
[2025-11-30 13:30:48] Set ATHENA_CORE_NUMBER=2
[2025-11-30 13:30:48] Starting ATLAS job with PandaID=6898177916
[2025-11-30 13:30:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 01:44:10]  *** The last 200 lines of the pilot log: ***
[2025-12-01 01:44:10] 2025-12-01 00:43:07,380 | INFO     | aborting loop
[2025-12-01 01:44:10] 2025-12-01 00:43:07,877 | INFO     | all payload control threads have been joined
[2025-12-01 01:44:10] 2025-12-01 00:43:08,270 | INFO     | all data control threads have been joined
[2025-12-01 01:44:10] 2025-12-01 00:43:08,385 | INFO     | [job] retrieve thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:08,386 | INFO     | [job] queue monitor thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:08,387 | INFO     | [job] job monitor thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:08,397 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:08,656 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:08,685 | INFO     | [job] validate thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:08,686 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:08,883 | INFO     | [payload] control thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:09,015 | INFO     | all job control threads have been joined
[2025-12-01 01:44:10] 2025-12-01 00:43:09,191 | INFO     | [payload] failed_post thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:09,276 | INFO     | [data] control thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:09,386 | INFO     | [data] copytool_out thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:09,552 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:09,568 | INFO     | [data] copytool_in thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:09,621 | INFO     | [payload] validate_post thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:10,021 | INFO     | [job] control thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:10,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 01:44:10] 2025-12-01 00:43:14,101 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 01:44:10] 2025-12-01 00:43:38,303 | INFO     | PID=3620552 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 01:44:10] 2025-12-01 00:43:38,303 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 01:44:10] 2025-12-01 00:43:38,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 01:44:10] 2025-12-01 00:43:38,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 01:44:10] 2025-12-01 00:44:03,332 | INFO     | [monitor] cgroup control has ended
[2025-12-01 01:44:10] 2025-12-01 00:44:05,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370100430656)>', '<ExcThread(monitor, started 140369379448576)>']
[2025-12-01 01:44:10] 2025-12-01 00:44:05,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 01:44:10] 2025-12-01 00:44:05,444 | INFO     | [monitor] control thread has ended
[2025-12-01 01:44:10] 2025-12-01 00:44:10,216 | INFO     | all workflow threads have been joined
[2025-12-01 01:44:10] 2025-12-01 00:44:10,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 01:44:10] 2025-12-01 00:44:10,217 | INFO     | traces error code: 0
[2025-12-01 01:44:10] 2025-12-01 00:44:10,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 01:44:10] 2025-12-01 00:44:10,260 [wrapper] ==== pilot stdout END ====
[2025-12-01 01:44:10] 2025-12-01 00:44:10,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 01:44:10] 2025-12-01 00:44:10,264 [wrapper] pilotpid: 3620552
[2025-12-01 01:44:10] 2025-12-01 00:44:10,266 [wrapper] Pilot exit status: 0
[2025-12-01 01:44:10] 2025-12-01 00:44:10,272 [wrapper] pandaids: 6898177916
[2025-12-01 01:44:10] 2025-12-01 00:44:10,287 [wrapper] cleanup supervisor_pilot 3697506 3620553
[2025-12-01 01:44:10] 2025-12-01 00:44:10,290 [wrapper] Test setup, not cleaning
[2025-12-01 01:44:10] 2025-12-01 00:44:10,291 [wrapper] apfmon messages muted
[2025-12-01 01:44:10] 2025-12-01 00:44:10,293 [wrapper] ==== wrapper stdout END ====
[2025-12-01 01:44:10] 2025-12-01 00:44:10,295 [wrapper] ==== wrapper stderr END ====
[2025-12-01 01:44:10]  *** Error codes and diagnostics ***
[2025-12-01 01:44:10]     "exeErrorCode": 0,
[2025-12-01 01:44:10]     "exeErrorDiag": "",
[2025-12-01 01:44:10]     "pilotErrorCode": 0,
[2025-12-01 01:44:10]     "pilotErrorDiag": "",
[2025-12-01 01:44:10]  *** Listing of results directory ***
[2025-12-01 01:44:10] total 1316488
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc    576529 Nov 26 04:33 pilot3.tar.gz
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc      5112 Nov 26 05:06 queuedata.json
[2025-12-01 01:44:10] -rwx------ 1 boinc boinc     36292 Nov 26 05:06 runpilot2-wrapper.sh
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc       100 Nov 30 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 01:44:10] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 13:30 run_atlas
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc       105 Nov 30 13:30 job.xml
[2025-12-01 01:44:10] -rw-r--r-- 2 boinc boinc 410363405 Nov 30 13:30 EVNT.47483658._002472.pool.root.1
[2025-12-01 01:44:10] -rw-r--r-- 2 boinc boinc    590106 Nov 30 13:30 input.tar.gz
[2025-12-01 01:44:10] -rw-r--r-- 2 boinc boinc     15847 Nov 30 13:30 start_atlas.sh
[2025-12-01 01:44:10] drwxrwx--x 2 boinc boinc      4096 Nov 30 13:30 shared
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc         0 Nov 30 13:30 boinc_setup_complete
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc      6208 Nov 30 13:30 init_data.xml
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc         0 Nov 30 13:30 boinc_lockfile
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc      2785 Nov 30 13:30 pandaJob.out
[2025-12-01 01:44:10] -rw------- 1 boinc boinc    991788 Nov 30 13:31 agis_schedconf.cvmfs.json
[2025-12-01 01:44:10] drwx------ 5 boinc boinc      4096 Nov 30 13:31 pilot3
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc       531 Dec  1 01:39 boinc_task_state.xml
[2025-12-01 01:44:10] -rw------- 1 boinc boinc 919051184 Dec  1 01:42 HITS.47556161._004543.pool.root.1
[2025-12-01 01:44:10] -rw------- 1 boinc boinc      1022 Dec  1 01:42 memory_monitor_summary.json
[2025-12-01 01:44:10] -rw------- 1 boinc boinc   1516240 Dec  1 01:42 agis_ddmendpoints.agis.ALL.json
[2025-12-01 01:44:10] -rw------- 1 boinc boinc   1215711 Dec  1 01:42 log.47556161._004543.job.log.tgz.1
[2025-12-01 01:44:10] -rw------- 1 boinc boinc      8573 Dec  1 01:43 heartbeat.json
[2025-12-01 01:44:10] -rw------- 1 boinc boinc        95 Dec  1 01:43 pilot_heartbeat.json
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc      8192 Dec  1 01:43 boinc_mmap_file
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc        28 Dec  1 01:43 wrapper_checkpoint.txt
[2025-12-01 01:44:10] -rw------- 1 boinc boinc      4752 Dec  1 01:44 pilotlog.txt
[2025-12-01 01:44:10] -rw------- 1 boinc boinc   6164575 Dec  1 01:44 log.47556161._004543.job.log.1
[2025-12-01 01:44:10] -rw------- 1 boinc boinc       353 Dec  1 01:44 output.list
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc       620 Dec  1 01:44 runtime_log
[2025-12-01 01:44:10] -rw------- 1 boinc boinc   7403520 Dec  1 01:44 result.tar.gz
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc      8903 Dec  1 01:44 runtime_log.err
[2025-12-01 01:44:10] -rw------- 1 boinc boinc       666 Dec  1 01:44 2yYLDmuyLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUvMKDmys6NHm.diag
[2025-12-01 01:44:10] -rw-r--r-- 1 boinc boinc      6812 Dec  1 01:44 stderr.txt
[2025-12-01 01:44:10] HITS file was successfully produced:
[2025-12-01 01:44:10] -rw------- 1 boinc boinc 919051184 Dec  1 01:42 shared/HITS.pool.root.1
[2025-12-01 01:44:10]  *** Contents of shared directory: ***
[2025-12-01 01:44:10] total 1306096
[2025-12-01 01:44:10] -rw-r--r-- 2 boinc boinc 410363405 Nov 30 13:30 ATLAS.root_0
[2025-12-01 01:44:10] -rw-r--r-- 2 boinc boinc    590106 Nov 30 13:30 input.tar.gz
[2025-12-01 01:44:10] -rw-r--r-- 2 boinc boinc     15847 Nov 30 13:30 start_atlas.sh
[2025-12-01 01:44:10] -rw------- 1 boinc boinc 919051184 Dec  1 01:42 HITS.pool.root.1
[2025-12-01 01:44:10] -rw------- 1 boinc boinc   7403520 Dec  1 01:44 result.tar.gz
01:44:11 (3616839): run_atlas exited; CPU time 87068.806916
01:44:11 (3616839): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN