Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:17 (1126166): wrapper (7.7.26015): starting
22:19:17 (1126166): wrapper: running run_atlas (--nthreads 10)
[2025-11-27 22:19:17] Arguments: --nthreads 10
[2025-11-27 22:19:17] Threads: 10
[2025-11-27 22:19:17] Checking for CVMFS
[2025-11-27 22:19:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 22:19:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 22:19:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 22:19:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 22:19:17] 2.13.2.0 6529 36098 454752 153395 3 57 40588075 40960001 15730 16776704 0 85892499 99.572 98608482 39854 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 22:19:17] CVMFS is ok
[2025-11-27 22:19:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 22:19:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 22:19:17] Further information can be found at the LHC@home message board.
[2025-11-27 22:19:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 22:19:17] Checking for apptainer binary...
[2025-11-27 22:19:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 22:19:17] Running /usr/bin/apptainer --version
[2025-11-27 22:19:17] apptainer version 1.4.4-1.el9
[2025-11-27 22:19:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 22:19:18] c-206-36.aglt2.org
[2025-11-27 22:19:18] apptainer works
[2025-11-27 22:19:18] Set ATHENA_PROC_NUMBER=10
[2025-11-27 22:19:18] Set ATHENA_CORE_NUMBER=10
[2025-11-27 22:19:18] Starting ATLAS job with PandaID=6894239205
[2025-11-27 22:19:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 05:52:32]  *** The last 200 lines of the pilot log: ***
[2025-11-28 05:52:32] 2025-11-28 10:51:40,824 | INFO     | time since job start (27122s) is within the limit (172800.0s)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,082 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 05:52:32] 2025-11-28 10:51:42,087 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3182.7950625
[2025-11-28 05:52:32] 2025-11-28 10:51:42,127 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894239205/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,140 | INFO     | extracted standard info from prmon json
[2025-11-28 05:52:32] 2025-11-28 10:51:42,140 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 05:52:32] 2025-11-28 10:51:42,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 05:52:32] 2025-11-28 10:51:42,141 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-28 05:52:32] 2025-11-28 10:51:42,141 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-28 05:52:32] 2025-11-28 10:51:42,155 | INFO     | fitting pss+swap vs Time
[2025-11-28 05:52:32] 2025-11-28 10:51:42,155 | INFO     | sum of square deviations: 27140129108.964195
[2025-11-28 05:52:32] 2025-11-28 10:51:42,159 | INFO     | sum of deviations: -163704648174.69382
[2025-11-28 05:52:32] 2025-11-28 10:51:42,159 | INFO     | mean x: 1764313531.8423424
[2025-11-28 05:52:32] 2025-11-28 10:51:42,159 | INFO     | mean y: 2706942.59009009
[2025-11-28 05:52:32] 2025-11-28 10:51:42,159 | INFO     | intersect: 10644746442.12603
[2025-11-28 05:52:32] 2025-11-28 10:51:42,160 | INFO     | chi2: 3.493846642740677
[2025-11-28 05:52:32] 2025-11-28 10:51:42,160 | INFO     | sum of square deviations: 26233535213.371273
[2025-11-28 05:52:32] 2025-11-28 10:51:42,164 | INFO     | sum of deviations: -101750508287.89746
[2025-11-28 05:52:32] 2025-11-28 10:51:42,164 | INFO     | mean x: 1764313379.3462415
[2025-11-28 05:52:32] 2025-11-28 10:51:42,164 | INFO     | mean y: 2717294.3348519364
[2025-11-28 05:52:32] 2025-11-28 10:51:42,164 | INFO     | intersect: 6845858398.554638
[2025-11-28 05:52:32] 2025-11-28 10:51:42,165 | INFO     | chi2: 2.0957273443787034
[2025-11-28 05:52:32] 2025-11-28 10:51:42,165 | INFO     | current chi2=2.0957273443787034 (change=40.016618968291276 %)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,165 | INFO     | sum of square deviations: 25347333769.963127
[2025-11-28 05:52:32] 2025-11-28 10:51:42,169 | INFO     | sum of deviations: -100848758338.78333
[2025-11-28 05:52:32] 2025-11-28 10:51:42,169 | INFO     | mean x: 1764313226.8479264
[2025-11-28 05:52:32] 2025-11-28 10:51:42,169 | INFO     | mean y: 2717449.5184331797
[2025-11-28 05:52:32] 2025-11-28 10:51:42,169 | INFO     | intersect: 7022343255.651667
[2025-11-28 05:52:32] 2025-11-28 10:51:42,170 | INFO     | chi2: 2.09352296818713
[2025-11-28 05:52:32] 2025-11-28 10:51:42,170 | INFO     | current chi2=2.09352296818713 (change=0.10518430259957443 %)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,170 | INFO     | right removable region: 433
[2025-11-28 05:52:32] 2025-11-28 10:51:42,170 | INFO     | sum of square deviations: 26233442493.371277
[2025-11-28 05:52:32] 2025-11-28 10:51:42,174 | INFO     | sum of deviations: -236381438260.56052
[2025-11-28 05:52:32] 2025-11-28 10:51:42,174 | INFO     | mean x: 1764313684.3462415
[2025-11-28 05:52:32] 2025-11-28 10:51:42,174 | INFO     | mean y: 2719100.569476082
[2025-11-28 05:52:32] 2025-11-28 10:51:42,174 | INFO     | intersect: 15900404139.577776
[2025-11-28 05:52:32] 2025-11-28 10:51:42,175 | INFO     | chi2: 2.01086542556836
[2025-11-28 05:52:32] 2025-11-28 10:51:42,175 | INFO     | current chi2=2.01086542556836 (change=42.445515467989246 %)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,175 | INFO     | sum of square deviations: 25347174865.265064
[2025-11-28 05:52:32] 2025-11-28 10:51:42,179 | INFO     | sum of deviations: -230277597224.30673
[2025-11-28 05:52:32] 2025-11-28 10:51:42,179 | INFO     | mean x: 1764313836.8502305
[2025-11-28 05:52:32] 2025-11-28 10:51:42,179 | INFO     | mean y: 2718038.564516129
[2025-11-28 05:52:32] 2025-11-28 10:51:42,179 | INFO     | intersect: 16031405782.23192
[2025-11-28 05:52:32] 2025-11-28 10:51:42,179 | INFO     | chi2: 1.9911489217934142
[2025-11-28 05:52:32] 2025-11-28 10:51:42,179 | INFO     | current chi2=1.9911489217934142 (change=0.980498422432872 %)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,180 | INFO     | left removable region: 20
[2025-11-28 05:52:32] 2025-11-28 10:51:42,180 | INFO     | sum of square deviations: 21842885260.387276
[2025-11-28 05:52:32] 2025-11-28 10:51:42,183 | INFO     | sum of deviations: -131639245589.06282
[2025-11-28 05:52:32] 2025-11-28 10:51:42,183 | INFO     | mean x: 1764313806.3535109
[2025-11-28 05:52:32] 2025-11-28 10:51:42,183 | INFO     | mean y: 2722469.7675544797
[2025-11-28 05:52:32] 2025-11-28 10:51:42,183 | INFO     | intersect: 10635609823.34175
[2025-11-28 05:52:32] 2025-11-28 10:51:42,184 | INFO     | chi2: 0.5239528220452051
[2025-11-28 05:52:32] 2025-11-28 10:51:42,184 | INFO     | current memory leak: -6.03 B/s (using 413 data points, chi2=0.52)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,185 | INFO     | could have reported an average CPU frequency of 3179 MHz (18 samples)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,185 | INFO     | ..............................
[2025-11-28 05:52:32] 2025-11-28 10:51:42,185 | INFO     | . Timing measurements:
[2025-11-28 05:52:32] 2025-11-28 10:51:42,185 | INFO     | . get job = 0 s
[2025-11-28 05:52:32] 2025-11-28 10:51:42,185 | INFO     | . initial setup = 2 s
[2025-11-28 05:52:32] 2025-11-28 10:51:42,185 | INFO     | . payload setup = 13 s
[2025-11-28 05:52:32] 2025-11-28 10:51:42,185 | INFO     | . stage-in = 0 s
[2025-11-28 05:52:32] 2025-11-28 10:51:42,185 | INFO     | . payload execution = 27068 s
[2025-11-28 05:52:32] 2025-11-28 10:51:42,186 | INFO     | . stage-out = 3 s
[2025-11-28 05:52:32] 2025-11-28 10:51:42,186 | INFO     | . log creation = 0 s
[2025-11-28 05:52:32] 2025-11-28 10:51:42,186 | INFO     | ..............................
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | 
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | job summary report
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | --------------------------------------------------
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | PanDA job id: 6894239205
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | task id: 47523939
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | errors: (none)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | pilot state: finished 
[2025-11-28 05:52:32] 2025-11-28 10:51:42,261 | INFO     | transexitcode: 0
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | exeerrorcode: 0
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | exeerrordiag: 
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | exitcode: 0
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | exitmsg: OK
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | cpuconsumptiontime: 92137 s
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | nevents: 400
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | neventsw: 0
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | pid: 1137669
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | pgrp: 1137669
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | corecount: 10
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | event service: False
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | sizes: {0: 2283895, 1: 2283895, 9: 2284185, 11: 2284213, 27086: 2320895, 27087: 2320894, 27090: 2330132, 27105: 2330270}
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | --------------------------------------------------
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | 
[2025-11-28 05:52:32] 2025-11-28 10:51:42,262 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 05:52:32] 2025-11-28 10:51:42,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,369 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,369 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,370 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 05:52:32] 2025-11-28 10:51:42,371 | INFO     | job 6894239205 has completed (purged errors)
[2025-11-28 05:52:32] 2025-11-28 10:51:42,371 | INFO     | overall cleanup function is called
[2025-11-28 05:52:32] 2025-11-28 10:51:43,381 | INFO     | --- collectZombieJob: --- 10, [1137669]
[2025-11-28 05:52:32] 2025-11-28 10:51:43,381 | INFO     | zombie collector waiting for pid 1137669
[2025-11-28 05:52:32] 2025-11-28 10:51:43,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 05:52:32] 2025-11-28 10:51:43,381 | INFO     | collected zombie processes
[2025-11-28 05:52:32] 2025-11-28 10:51:43,381 | INFO     | will attempt to kill all subprocesses of pid=1137669
[2025-11-28 05:52:32] 2025-11-28 10:51:44,423 | INFO     | process IDs to be killed: [1137669] (in reverse order)
[2025-11-28 05:52:32] 2025-11-28 10:51:44,771 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 05:52:32] 2025-11-28 10:51:44,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 05:52:32] 2025-11-28 10:51:44,785 | INFO     | did not find any defunct processes belonging to 1137669
[2025-11-28 05:52:32] 2025-11-28 10:51:44,799 | INFO     | did not find any defunct processes belonging to 1137669
[2025-11-28 05:52:32] 2025-11-28 10:51:44,801 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 05:52:32] 2025-11-28 10:51:44,801 | INFO     | ready for new job
[2025-11-28 05:52:32] 2025-11-28 10:51:44,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 05:52:32] 2025-11-28 10:51:44,804 | INFO     | ***************************************
[2025-11-28 05:52:32] 2025-11-28 10:51:44,805 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 05:52:32] 2025-11-28 10:51:44,805 | INFO     | ***************************************
[2025-11-28 05:52:32] 2025-11-28 10:51:44,805 | INFO     | 
[2025-11-28 05:52:32] 2025-11-28 10:51:44,808 | INFO     | architecture information:
[2025-11-28 05:52:32] 2025-11-28 10:51:44,809 | INFO     | executing command: cat /etc/os-release
[2025-11-28 05:52:32] 2025-11-28 10:51:44,830 | INFO     | cat /etc/os-release:
[2025-11-28 05:52:32] NAME="CentOS Linux"
[2025-11-28 05:52:32] VERSION="7 (Core)"
[2025-11-28 05:52:32] ID="centos"
[2025-11-28 05:52:32] ID_LIKE="rhel fedora"
[2025-11-28 05:52:32] VERSION_ID="7"
[2025-11-28 05:52:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 05:52:32] ANSI_COLOR="0;31"
[2025-11-28 05:52:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 05:52:32] HOME_URL="https://www.centos.org/"
[2025-11-28 05:52:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 05:52:32] 
[2025-11-28 05:52:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 05:52:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 05:52:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 05:52:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 05:52:32] 
[2025-11-28 05:52:32] 2025-11-28 10:51:44,830 | INFO     | ***************************************
[2025-11-28 05:52:32] 2025-11-28 10:51:45,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 05:52:32] 2025-11-28 10:51:45,444 | INFO     | sufficient remaining disk space (82650857472 B)
[2025-11-28 05:52:32] 2025-11-28 10:51:45,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 05:52:32] 2025-11-28 10:51:45,444 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 05:52:32] 2025-11-28 10:51:45,444 | INFO     | update_server=False
[2025-11-28 05:52:32] 2025-11-28 10:51:45,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 05:52:32] 2025-11-28 10:51:45,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 05:52:32] 2025-11-28 10:51:45,895 | INFO     | all data control threads have been joined
[2025-11-28 05:52:32] 2025-11-28 10:51:46,230 | INFO     | all payload control threads have been joined
[2025-11-28 05:52:32] 2025-11-28 10:51:46,333 | INFO     | all job control threads have been joined
[2025-11-28 05:52:32] 2025-11-28 10:51:46,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 05:52:32] 2025-11-28 10:51:46,347 | INFO     | aborting loop
[2025-11-28 05:52:32] 2025-11-28 10:51:46,439 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 05:52:32] 2025-11-28 10:51:46,451 | INFO     | [job] retrieve thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:46,839 | INFO     | [payload] failed_post thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:46,901 | INFO     | [data] control thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,207 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,214 | INFO     | [data] copytool_in thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,217 | INFO     | [payload] validate_post thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,239 | INFO     | [payload] control thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,335 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,338 | INFO     | [job] control thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 05:52:32] 2025-11-28 10:51:47,340 | INFO     | [job] validate thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,353 | INFO     | [job] job monitor thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,460 | INFO     | [data] copytool_out thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,687 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:47,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:48,344 | INFO     | [job] queue monitor thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:51:50,449 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 05:52:32] 2025-11-28 10:52:14,271 | INFO     | PID=1130041 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 05:52:32] 2025-11-28 10:52:14,271 | INFO     | .. there are 19 such processes running
[2025-11-28 05:52:32] 2025-11-28 10:52:14,272 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 05:52:32] 2025-11-28 10:52:14,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 05:52:32] 2025-11-28 10:52:14,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 05:52:32] 2025-11-28 10:52:26,320 | INFO     | [monitor] cgroup control has ended
[2025-11-28 05:52:32] 2025-11-28 10:52:26,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267868452672)>', '<ExcThread(monitor, started 140267390760704)>']
[2025-11-28 05:52:32] 2025-11-28 10:52:27,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 05:52:32] 2025-11-28 10:52:27,349 | INFO     | [monitor] control thread has ended
[2025-11-28 05:52:32] 2025-11-28 10:52:31,545 | INFO     | all workflow threads have been joined
[2025-11-28 05:52:32] 2025-11-28 10:52:31,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 05:52:32] 2025-11-28 10:52:31,545 | INFO     | traces error code: 0
[2025-11-28 05:52:32] 2025-11-28 10:52:31,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 05:52:32] 2025-11-28 10:52:31,685 [wrapper] ==== pilot stdout END ====
[2025-11-28 05:52:32] 2025-11-28 10:52:31,688 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 05:52:32] 2025-11-28 10:52:31,691 [wrapper] pilotpid: 1130041
[2025-11-28 05:52:32] 2025-11-28 10:52:31,693 [wrapper] Pilot exit status: 0
[2025-11-28 05:52:32] 2025-11-28 10:52:31,778 [wrapper] pandaids: 6894239205
[2025-11-28 05:52:32] 2025-11-28 10:52:32,164 [wrapper] cleanup supervisor_pilot 2173833 1130042
[2025-11-28 05:52:32] 2025-11-28 10:52:32,176 [wrapper] Test setup, not cleaning
[2025-11-28 05:52:32] 2025-11-28 10:52:32,184 [wrapper] apfmon messages muted
[2025-11-28 05:52:32] 2025-11-28 10:52:32,192 [wrapper] ==== wrapper stdout END ====
[2025-11-28 05:52:32] 2025-11-28 10:52:32,194 [wrapper] ==== wrapper stderr END ====
[2025-11-28 05:52:32]  *** Error codes and diagnostics ***
[2025-11-28 05:52:32]     "exeErrorCode": 0,
[2025-11-28 05:52:32]     "exeErrorDiag": "",
[2025-11-28 05:52:32]     "pilotErrorCode": 0,
[2025-11-28 05:52:32]     "pilotErrorDiag": "",
[2025-11-28 05:52:32]  *** Listing of results directory ***
[2025-11-28 05:52:32] total 621612
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:57 queuedata.json
[2025-11-28 05:52:32] -rwx------. 1 boincer umatlas     36292 Nov 25 22:58 runpilot2-wrapper.sh
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas       100 Nov 27 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 05:52:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 22:19 run_atlas
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas       105 Nov 27 22:19 job.xml
[2025-11-28 05:52:32] -rw-r--r--. 2 boincer umatlas 294530292 Nov 27 22:19 EVNT.47523935._000004.pool.root.1
[2025-11-28 05:52:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 22:19 start_atlas.sh
[2025-11-28 05:52:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 22:19 shared
[2025-11-28 05:52:32] -rw-r--r--. 2 boincer umatlas    589945 Nov 27 22:19 input.tar.gz
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas         0 Nov 27 22:19 boinc_lockfile
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas      2608 Nov 27 22:19 pandaJob.out
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas        57 Nov 27 22:19 setup.sh.local
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas    991850 Nov 27 22:19 agis_schedconf.cvmfs.json
[2025-11-28 05:52:32] drwx------. 5 boincer umatlas      4096 Nov 27 22:19 pilot3
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas      6902 Nov 28 05:46 init_data.xml
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas 329823930 Nov 28 05:49 HITS.47523939._000079.pool.root.1
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas       531 Nov 28 05:49 boinc_task_state.xml
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas      1038 Nov 28 05:51 memory_monitor_summary.json
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas   1516240 Nov 28 05:51 agis_ddmendpoints.agis.ALL.json
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas    643228 Nov 28 05:51 log.47523939._000079.job.log.tgz.1
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas      7774 Nov 28 05:51 heartbeat.json
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas        28 Nov 28 05:52 wrapper_checkpoint.txt
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 05:52 boinc_mmap_file
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas        95 Nov 28 05:52 pilot_heartbeat.json
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas      4824 Nov 28 05:52 pilotlog.txt
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas   3488088 Nov 28 05:52 log.47523939._000079.job.log.1
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas       357 Nov 28 05:52 output.list
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas       620 Nov 28 05:52 runtime_log
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas   4147200 Nov 28 05:52 result.tar.gz
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas      9345 Nov 28 05:52 runtime_log.err
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas       658 Nov 28 05:52 A8JMDmlqLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDtJKDmLHwMCn.diag
[2025-11-28 05:52:32] -rw-r--r--. 1 boincer umatlas     21287 Nov 28 05:52 stderr.txt
[2025-11-28 05:52:32] HITS file was successfully produced:
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas 329823930 Nov 28 05:49 shared/HITS.pool.root.1
[2025-11-28 05:52:32]  *** Contents of shared directory: ***
[2025-11-28 05:52:32] total 614376
[2025-11-28 05:52:32] -rw-r--r--. 2 boincer umatlas 294530292 Nov 27 22:19 ATLAS.root_0
[2025-11-28 05:52:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 22:19 start_atlas.sh
[2025-11-28 05:52:32] -rw-r--r--. 2 boincer umatlas    589945 Nov 27 22:19 input.tar.gz
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas 329823930 Nov 28 05:49 HITS.pool.root.1
[2025-11-28 05:52:32] -rw-------. 1 boincer umatlas   4147200 Nov 28 05:52 result.tar.gz
05:52:34 (1126166): run_atlas exited; CPU time 92665.863752
05:52:34 (1126166): called boinc_finish(0)

</stderr_txt>
]]>

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