Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:31:21 (3101): wrapper (7.7.26015): starting
16:31:21 (3101): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 16:31:21] Arguments: --nthreads 8
[2025-11-27 16:31:21] Threads: 8
[2025-11-27 16:31:21] Checking for CVMFS
[2025-11-27 16:31:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 16:31:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 16:31:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 16:31:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 16:31:22] 2.11.2.0 2913 75284 83664 153385 1 82 10345268 20275201 1 130560 0 23000482 99.909 3630019 31133 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 16:31:22] CVMFS is ok
[2025-11-27 16:31:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 16:31:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 16:31:22] Further information can be found at the LHC@home message board.
[2025-11-27 16:31:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 16:31:22] Checking for apptainer binary...
[2025-11-27 16:31:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 16:31:22] Running /usr/bin/apptainer --version
[2025-11-27 16:31:22] apptainer version 1.3.2-1.el7
[2025-11-27 16:31:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 16:31:23] c-115-15.aglt2.org
[2025-11-27 16:31:23] apptainer works
[2025-11-27 16:31:23] Set ATHENA_PROC_NUMBER=8
[2025-11-27 16:31:23] Set ATHENA_CORE_NUMBER=8
[2025-11-27 16:31:23] Starting ATLAS job with PandaID=6898120681
[2025-11-27 16:31:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 04:04:08]  *** The last 200 lines of the pilot log: ***
[2025-11-28 04:04:08] 2025-11-28 09:03:33,020 | INFO     | time since job start (41513s) is within the limit (172800.0s)
[2025-11-28 04:04:08] 2025-11-28 09:03:34,816 | INFO     | monitor loop #3055: job 0:6898120681 is in state 'finished'
[2025-11-28 04:04:08] 2025-11-28 09:03:34,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:04:08] 2025-11-28 09:03:35,025 | INFO     | time since job start (41515s) is within the limit (172800.0s)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,046 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 04:04:08] 2025-11-28 09:03:36,050 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-28 04:04:08] 2025-11-28 09:03:36,055 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898120681/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,056 | INFO     | extracted standard info from prmon json
[2025-11-28 04:04:08] 2025-11-28 09:03:36,056 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 04:04:08] 2025-11-28 09:03:36,056 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 04:04:08] 2025-11-28 09:03:36,067 | INFO     | fitting pss+swap vs Time
[2025-11-28 04:04:08] 2025-11-28 09:03:36,067 | INFO     | sum of square deviations: 97499945886.58864
[2025-11-28 04:04:08] 2025-11-28 09:03:36,076 | INFO     | sum of deviations: 601615334835.8828
[2025-11-28 04:04:08] 2025-11-28 09:03:36,076 | INFO     | mean x: 1764299841.1176472
[2025-11-28 04:04:08] 2025-11-28 09:03:36,076 | INFO     | mean y: 3204312.8514705882
[2025-11-28 04:04:08] 2025-11-28 09:03:36,076 | INFO     | intersect: -10883261623.237736
[2025-11-28 04:04:08] 2025-11-28 09:03:36,077 | INFO     | chi2: 6.480374021315605
[2025-11-28 04:04:08] 2025-11-28 09:03:36,078 | INFO     | sum of square deviations: 95365113024.66672
[2025-11-28 04:04:08] 2025-11-28 09:03:36,087 | INFO     | sum of deviations: 852377927961.0226
[2025-11-28 04:04:08] 2025-11-28 09:03:36,087 | INFO     | mean x: 1764299688.6222222
[2025-11-28 04:04:08] 2025-11-28 09:03:36,087 | INFO     | mean y: 3222220.145185185
[2025-11-28 04:04:08] 2025-11-28 09:03:36,087 | INFO     | intersect: -15766172532.222044
[2025-11-28 04:04:08] 2025-11-28 09:03:36,088 | INFO     | chi2: 3.322061833275801
[2025-11-28 04:04:08] 2025-11-28 09:03:36,088 | INFO     | current chi2=3.322061833275801 (change=48.73657257515243 %)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,089 | INFO     | sum of square deviations: 93261676100.21645
[2025-11-28 04:04:08] 2025-11-28 09:03:36,097 | INFO     | sum of deviations: 961416659930.7769
[2025-11-28 04:04:08] 2025-11-28 09:03:36,097 | INFO     | mean x: 1764299536.1268656
[2025-11-28 04:04:08] 2025-11-28 09:03:36,098 | INFO     | mean y: 3230117.5791044775
[2025-11-28 04:04:08] 2025-11-28 09:03:36,098 | INFO     | intersect: -18184594057.034603
[2025-11-28 04:04:08] 2025-11-28 09:03:36,098 | INFO     | chi2: 2.6258548784772233
[2025-11-28 04:04:08] 2025-11-28 09:03:36,098 | INFO     | current chi2=2.6258548784772233 (change=20.957073942000218 %)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,099 | INFO     | right removable region: 669
[2025-11-28 04:04:08] 2025-11-28 09:03:36,099 | INFO     | sum of square deviations: 95364856824.6667
[2025-11-28 04:04:08] 2025-11-28 09:03:36,108 | INFO     | sum of deviations: 389014607529.53314
[2025-11-28 04:04:08] 2025-11-28 09:03:36,108 | INFO     | mean x: 1764299993.6222222
[2025-11-28 04:04:08] 2025-11-28 09:03:36,108 | INFO     | mean y: 3219470.217777778
[2025-11-28 04:04:08] 2025-11-28 09:03:36,109 | INFO     | intersect: -7193755311.018207
[2025-11-28 04:04:08] 2025-11-28 09:03:36,109 | INFO     | chi2: 4.073316856936287
[2025-11-28 04:04:08] 2025-11-28 09:03:36,109 | INFO     | current chi2=4.073316856936287 (change=37.1437999791662 %)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,110 | INFO     | sum of square deviations: 93261245684.71783
[2025-11-28 04:04:08] 2025-11-28 09:03:36,118 | INFO     | sum of deviations: 349417770285.35114
[2025-11-28 04:04:08] 2025-11-28 09:03:36,119 | INFO     | mean x: 1764300146.1238806
[2025-11-28 04:04:08] 2025-11-28 09:03:36,119 | INFO     | mean y: 3222338.6343283583
[2025-11-28 04:04:08] 2025-11-28 09:03:36,119 | INFO     | intersect: -6607002719.444048
[2025-11-28 04:04:08] 2025-11-28 09:03:36,119 | INFO     | chi2: 4.034284535494379
[2025-11-28 04:04:08] 2025-11-28 09:03:36,120 | INFO     | current chi2=4.034284535494379 (change=0.9582441733066214 %)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,120 | INFO     | left removable region: 20
[2025-11-28 04:04:08] 2025-11-28 09:03:36,120 | INFO     | sum of square deviations: 84764174458.72108
[2025-11-28 04:04:08] 2025-11-28 09:03:36,131 | INFO     | sum of deviations: 676410112083.1184
[2025-11-28 04:04:08] 2025-11-28 09:03:36,132 | INFO     | mean x: 1764300115.633282
[2025-11-28 04:04:08] 2025-11-28 09:03:36,132 | INFO     | mean y: 3253575.559322034
[2025-11-28 04:04:08] 2025-11-28 09:03:36,132 | INFO     | intersect: -14075694831.411015
[2025-11-28 04:04:08] 2025-11-28 09:03:36,132 | INFO     | chi2: 0.062773248403466
[2025-11-28 04:04:08] 2025-11-28 09:03:36,133 | INFO     | current memory leak: 7.98 B/s (using 649 data points, chi2=0.06)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,133 | INFO     | could have reported an average CPU frequency of 2408 MHz (26 samples)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,133 | INFO     | ..............................
[2025-11-28 04:04:08] 2025-11-28 09:03:36,133 | INFO     | . Timing measurements:
[2025-11-28 04:04:08] 2025-11-28 09:03:36,133 | INFO     | . get job = 0 s
[2025-11-28 04:04:08] 2025-11-28 09:03:36,134 | INFO     | . initial setup = 2 s
[2025-11-28 04:04:08] 2025-11-28 09:03:36,134 | INFO     | . payload setup = 8 s
[2025-11-28 04:04:08] 2025-11-28 09:03:36,134 | INFO     | . stage-in = 0 s
[2025-11-28 04:04:08] 2025-11-28 09:03:36,134 | INFO     | . payload execution = 41473 s
[2025-11-28 04:04:08] 2025-11-28 09:03:36,134 | INFO     | . stage-out = 3 s
[2025-11-28 04:04:08] 2025-11-28 09:03:36,134 | INFO     | . log creation = 0 s
[2025-11-28 04:04:08] 2025-11-28 09:03:36,134 | INFO     | ..............................
[2025-11-28 04:04:08] 2025-11-28 09:03:36,216 | INFO     | 
[2025-11-28 04:04:08] 2025-11-28 09:03:36,216 | INFO     | job summary report
[2025-11-28 04:04:08] 2025-11-28 09:03:36,217 | INFO     | --------------------------------------------------
[2025-11-28 04:04:08] 2025-11-28 09:03:36,217 | INFO     | PanDA job id: 6898120681
[2025-11-28 04:04:08] 2025-11-28 09:03:36,217 | INFO     | task id: 47556161
[2025-11-28 04:04:08] 2025-11-28 09:03:36,217 | INFO     | errors: (none)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 04:04:08] 2025-11-28 09:03:36,218 | INFO     | pilot state: finished 
[2025-11-28 04:04:08] 2025-11-28 09:03:36,218 | INFO     | transexitcode: 0
[2025-11-28 04:04:08] 2025-11-28 09:03:36,218 | INFO     | exeerrorcode: 0
[2025-11-28 04:04:08] 2025-11-28 09:03:36,218 | INFO     | exeerrordiag: 
[2025-11-28 04:04:08] 2025-11-28 09:03:36,218 | INFO     | exitcode: 0
[2025-11-28 04:04:08] 2025-11-28 09:03:36,219 | INFO     | exitmsg: OK
[2025-11-28 04:04:08] 2025-11-28 09:03:36,219 | INFO     | cpuconsumptiontime: 321674 s
[2025-11-28 04:04:08] 2025-11-28 09:03:36,219 | INFO     | nevents: 1000
[2025-11-28 04:04:08] 2025-11-28 09:03:36,219 | INFO     | neventsw: 0
[2025-11-28 04:04:08] 2025-11-28 09:03:36,219 | INFO     | pid: 13349
[2025-11-28 04:04:08] 2025-11-28 09:03:36,219 | INFO     | pgrp: 13349
[2025-11-28 04:04:08] 2025-11-28 09:03:36,220 | INFO     | corecount: 8
[2025-11-28 04:04:08] 2025-11-28 09:03:36,220 | INFO     | event service: False
[2025-11-28 04:04:08] 2025-11-28 09:03:36,220 | INFO     | sizes: {0: 2284093, 1: 2284292, 6: 2284554, 11: 2284582, 41485: 2328736, 41489: 2337914, 41498: 2338104}
[2025-11-28 04:04:08] 2025-11-28 09:03:36,220 | INFO     | --------------------------------------------------
[2025-11-28 04:04:08] 2025-11-28 09:03:36,220 | INFO     | 
[2025-11-28 04:04:08] 2025-11-28 09:03:36,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 04:04:08] 2025-11-28 09:03:36,248 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,248 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,250 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 04:04:08] 2025-11-28 09:03:36,252 | INFO     | job 6898120681 has completed (purged errors)
[2025-11-28 04:04:08] 2025-11-28 09:03:36,253 | INFO     | overall cleanup function is called
[2025-11-28 04:04:08] 2025-11-28 09:03:37,267 | INFO     | --- collectZombieJob: --- 10, [13349]
[2025-11-28 04:04:08] 2025-11-28 09:03:37,268 | INFO     | zombie collector waiting for pid 13349
[2025-11-28 04:04:08] 2025-11-28 09:03:37,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 04:04:08] 2025-11-28 09:03:37,268 | INFO     | collected zombie processes
[2025-11-28 04:04:08] 2025-11-28 09:03:37,268 | INFO     | will attempt to kill all subprocesses of pid=13349
[2025-11-28 04:04:08] 2025-11-28 09:03:37,352 | INFO     | process IDs to be killed: [13349] (in reverse order)
[2025-11-28 04:04:08] 2025-11-28 09:03:37,406 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 04:04:08] 2025-11-28 09:03:37,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 04:04:08] 2025-11-28 09:03:37,409 | INFO     | did not find any defunct processes belonging to 13349
[2025-11-28 04:04:08] 2025-11-28 09:03:37,412 | INFO     | did not find any defunct processes belonging to 13349
[2025-11-28 04:04:08] 2025-11-28 09:03:37,414 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 04:04:08] 2025-11-28 09:03:37,414 | INFO     | ready for new job
[2025-11-28 04:04:08] 2025-11-28 09:03:37,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 04:04:08] 2025-11-28 09:03:37,417 | INFO     | ***************************************
[2025-11-28 04:04:08] 2025-11-28 09:03:37,417 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 04:04:08] 2025-11-28 09:03:37,417 | INFO     | ***************************************
[2025-11-28 04:04:08] 2025-11-28 09:03:37,418 | INFO     | 
[2025-11-28 04:04:08] 2025-11-28 09:03:37,418 | INFO     | architecture information:
[2025-11-28 04:04:08] 2025-11-28 09:03:37,419 | INFO     | executing command: cat /etc/os-release
[2025-11-28 04:04:08] 2025-11-28 09:03:37,436 | INFO     | cat /etc/os-release:
[2025-11-28 04:04:08] NAME="CentOS Linux"
[2025-11-28 04:04:08] VERSION="7 (Core)"
[2025-11-28 04:04:08] ID="centos"
[2025-11-28 04:04:08] ID_LIKE="rhel fedora"
[2025-11-28 04:04:08] VERSION_ID="7"
[2025-11-28 04:04:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 04:04:08] ANSI_COLOR="0;31"
[2025-11-28 04:04:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 04:04:08] HOME_URL="https://www.centos.org/"
[2025-11-28 04:04:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 04:04:08] 
[2025-11-28 04:04:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 04:04:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 04:04:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 04:04:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 04:04:08] 
[2025-11-28 04:04:08] 2025-11-28 09:03:37,437 | INFO     | ***************************************
[2025-11-28 04:04:08] 2025-11-28 09:03:37,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 04:04:08] 2025-11-28 09:03:37,961 | INFO     | sufficient remaining disk space (17452498944 B)
[2025-11-28 04:04:08] 2025-11-28 09:03:37,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 04:04:08] 2025-11-28 09:03:37,962 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 04:04:08] 2025-11-28 09:03:37,962 | INFO     | update_server=False
[2025-11-28 04:04:08] 2025-11-28 09:03:37,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 04:04:08] 2025-11-28 09:03:37,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 04:04:08] 2025-11-28 09:03:37,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:04:08] 2025-11-28 09:03:37,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 04:04:08] 2025-11-28 09:03:38,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:04:08] 2025-11-28 09:03:38,325 | INFO     | aborting loop
[2025-11-28 04:04:08] 2025-11-28 09:03:38,797 | INFO     | all data control threads have been joined
[2025-11-28 04:04:08] 2025-11-28 09:03:38,968 | INFO     | [job] retrieve thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:38,969 | INFO     | [job] queue monitor thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:39,073 | INFO     | all payload control threads have been joined
[2025-11-28 04:04:08] 2025-11-28 09:03:39,208 | INFO     | [payload] failed_post thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:39,309 | INFO     | all job control threads have been joined
[2025-11-28 04:04:08] 2025-11-28 09:03:39,331 | INFO     | [job] job monitor thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:39,361 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:39,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:39,802 | INFO     | [data] control thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:39,815 | INFO     | [payload] validate_post thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:39,968 | INFO     | [data] copytool_out thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:40,076 | INFO     | [payload] control thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:40,216 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:40,228 | INFO     | [job] validate thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:40,315 | INFO     | [job] control thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:40,333 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:40,404 | INFO     | [data] copytool_in thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:41,970 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 04:04:08] 2025-11-28 09:03:48,966 | INFO     | [monitor] cgroup control has ended
[2025-11-28 04:04:08] 2025-11-28 09:03:49,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425415411520)>', '<ExcThread(monitor, started 140424593258240)>']
[2025-11-28 04:04:08] 2025-11-28 09:03:54,464 | INFO     | all workflow threads have been joined
[2025-11-28 04:04:08] 2025-11-28 09:03:54,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 04:04:08] 2025-11-28 09:03:54,465 | INFO     | traces error code: 0
[2025-11-28 04:04:08] 2025-11-28 09:03:54,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 04:04:08] 2025-11-28 09:04:08,235 | INFO     | PID=6851 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-28 04:04:08] 2025-11-28 09:04:08,235 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 04:04:08] 2025-11-28 09:04:08,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 04:04:08] 2025-11-28 09:04:08,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 04:04:08] 2025-11-28 09:04:08,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 04:04:08] 2025-11-28 09:04:08,236 | INFO     | [monitor] control thread has ended
[2025-11-28 04:04:08] 2025-11-28 09:04:08,352 [wrapper] ==== pilot stdout END ====
[2025-11-28 04:04:08] 2025-11-28 09:04:08,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 04:04:08] 2025-11-28 09:04:08,361 [wrapper] pilotpid: 6851
[2025-11-28 04:04:08] 2025-11-28 09:04:08,365 [wrapper] Pilot exit status: 0
[2025-11-28 04:04:08] 2025-11-28 09:04:08,381 [wrapper] pandaids: 6898120681
[2025-11-28 04:04:08] 2025-11-28 09:04:08,424 [wrapper] cleanup supervisor_pilot 21211 6852
[2025-11-28 04:04:08] 2025-11-28 09:04:08,429 [wrapper] Test setup, not cleaning
[2025-11-28 04:04:08] 2025-11-28 09:04:08,433 [wrapper] apfmon messages muted
[2025-11-28 04:04:08] 2025-11-28 09:04:08,438 [wrapper] ==== wrapper stdout END ====
[2025-11-28 04:04:08] 2025-11-28 09:04:08,442 [wrapper] ==== wrapper stderr END ====
[2025-11-28 04:04:08]  *** Error codes and diagnostics ***
[2025-11-28 04:04:08]     "exeErrorCode": 0,
[2025-11-28 04:04:08]     "exeErrorDiag": "",
[2025-11-28 04:04:08]     "pilotErrorCode": 0,
[2025-11-28 04:04:08]     "pilotErrorDiag": "",
[2025-11-28 04:04:08]  *** Listing of results directory ***
[2025-11-28 04:04:08] total 1326516
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 22:40 queuedata.json
[2025-11-28 04:04:08] -rwx------ 1 boincer umatlas     36292 Nov 25 22:45 runpilot2-wrapper.sh
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas       100 Nov 27 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 04:04:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 16:31 run_atlas
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas       105 Nov 27 16:31 job.xml
[2025-11-28 04:04:08] -rw-r--r-- 2 boincer umatlas 409922195 Nov 27 16:31 EVNT.47483658._002443.pool.root.1
[2025-11-28 04:04:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 16:31 start_atlas.sh
[2025-11-28 04:04:08] drwxrwx--x 2 boincer umatlas      4096 Nov 27 16:31 shared
[2025-11-28 04:04:08] -rw-r--r-- 2 boincer umatlas    590103 Nov 27 16:31 input.tar.gz
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas         0 Nov 27 16:31 boinc_lockfile
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 16:31 pandaJob.out
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas        57 Nov 27 16:31 setup.sh.local
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas    991540 Nov 27 16:31 agis_schedconf.cvmfs.json
[2025-11-28 04:04:08] drwx------ 5 boincer umatlas      4096 Nov 27 16:31 pilot3
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas       533 Nov 28 03:51 boinc_task_state.xml
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas      5913 Nov 28 04:01 init_data.xml
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas 929197215 Nov 28 04:02 HITS.47556161._004253.pool.root.1
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas      1064 Nov 28 04:03 memory_monitor_summary.json
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas        95 Nov 28 04:03 pilot_heartbeat.json
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas   1516240 Nov 28 04:03 agis_ddmendpoints.agis.ALL.json
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas   1939371 Nov 28 04:03 log.47556161._004253.job.log.tgz.1
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas      8661 Nov 28 04:03 heartbeat.json
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas        29 Nov 28 04:03 wrapper_checkpoint.txt
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 04:03 boinc_mmap_file
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas       744 Nov 28 04:04 pilotlog.txt
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas   5720234 Nov 28 04:04 log.47556161._004253.job.log.1
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas       353 Nov 28 04:04 output.list
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas       620 Nov 28 04:04 runtime_log
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas   7680000 Nov 28 04:04 result.tar.gz
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas      9343 Nov 28 04:04 runtime_log.err
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas       668 Nov 28 04:04 cMuNDmudLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSsJKDmQxT8In.diag
[2025-11-28 04:04:08] -rw-r--r-- 1 boincer umatlas     21287 Nov 28 04:04 stderr.txt
[2025-11-28 04:04:08] HITS file was successfully produced:
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas 929197215 Nov 28 04:02 shared/HITS.pool.root.1
[2025-11-28 04:04:08]  *** Contents of shared directory: ***
[2025-11-28 04:04:08] total 1315836
[2025-11-28 04:04:08] -rw-r--r-- 2 boincer umatlas 409922195 Nov 27 16:31 ATLAS.root_0
[2025-11-28 04:04:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 16:31 start_atlas.sh
[2025-11-28 04:04:08] -rw-r--r-- 2 boincer umatlas    590103 Nov 27 16:31 input.tar.gz
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas 929197215 Nov 28 04:02 HITS.pool.root.1
[2025-11-28 04:04:08] -rw------- 1 boincer umatlas   7680000 Nov 28 04:04 result.tar.gz
04:04:10 (3101): run_atlas exited; CPU time 319727.756210
04:04:10 (3101): called boinc_finish(0)

</stderr_txt>
]]>

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