Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:25:02 (367458): wrapper (7.7.26015): starting
01:25:02 (367458): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 01:25:02] Arguments: --nthreads 12
[2025-11-28 01:25:02] Threads: 12
[2025-11-28 01:25:02] Checking for CVMFS
[2025-11-28 01:25:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 01:25:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 01:25:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 01:25:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 01:25:02] 2.13.3.0 321434 179 44520 153391 1 81 3246007 4096001 0 130560 0 117414 99.972 9452 434 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-28 01:25:02] CVMFS is ok
[2025-11-28 01:25:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 01:25:02] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-28 01:25:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-28 01:25:02] Further information can be found at the LHC@home message board.
[2025-11-28 01:25:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 01:25:02] Checking for apptainer binary...
[2025-11-28 01:25:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 01:25:02] Running /usr/bin/apptainer --version
[2025-11-28 01:25:02] apptainer version 1.4.2
[2025-11-28 01:25:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 01:25:02] matisse
[2025-11-28 01:25:02] apptainer works
[2025-11-28 01:25:02] Set ATHENA_PROC_NUMBER=12
[2025-11-28 01:25:02] Set ATHENA_CORE_NUMBER=12
[2025-11-28 01:25:02] Starting ATLAS job with PandaID=6898378136
[2025-11-28 01:25:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 04:16:29]  *** The last 200 lines of the pilot log: ***
[2025-11-28 04:16:29] 2025-11-28 03:15:25,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,440 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 04:16:29] 2025-11-28 03:15:25,441 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3009.768875
[2025-11-28 04:16:29] 2025-11-28 03:15:25,442 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6898378136/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,443 | INFO     | extracted standard info from prmon json
[2025-11-28 04:16:29] 2025-11-28 03:15:25,443 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 04:16:29] 2025-11-28 03:15:25,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 04:16:29] 2025-11-28 03:15:25,444 | INFO     | fitting pss+swap vs Time
[2025-11-28 04:16:29] 2025-11-28 03:15:25,444 | INFO     | sum of square deviations: 1444121225.6646667
[2025-11-28 04:16:29] 2025-11-28 03:15:25,444 | INFO     | sum of deviations: 49699606848.72453
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | mean x: 1764294589.209581
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | mean y: 3521454.9221556885
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | intersect: -60714890469.735085
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | chi2: 2.246760728749738
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | sum of square deviations: 1318249707.3642006
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | sum of deviations: 70778363503.4321
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | mean x: 1764294436.7098765
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | mean y: 3546457.6049382715
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | intersect: -94723478529.34998
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | chi2: 1.4451031896996738
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | current chi2=1.4451031896996738 (change=35.680592454371634 %)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,445 | INFO     | sum of square deviations: 1199922974.636942
[2025-11-28 04:16:29] 2025-11-28 03:15:25,446 | INFO     | sum of deviations: 66667609332.31204
[2025-11-28 04:16:29] 2025-11-28 03:15:25,446 | INFO     | mean x: 1764294284.2165606
[2025-11-28 04:16:29] 2025-11-28 03:15:25,446 | INFO     | mean y: 3541160.72611465
[2025-11-28 04:16:29] 2025-11-28 03:15:25,446 | INFO     | intersect: -98020485858.98253
[2025-11-28 04:16:29] 2025-11-28 03:15:25,446 | INFO     | chi2: 1.4456718168535094
[2025-11-28 04:16:29] 2025-11-28 03:15:25,446 | INFO     | current chi2=1.4456718168535094 (change=-0.03934855018580567 %)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,446 | INFO     | right removable region: 156
[2025-11-28 04:16:29] 2025-11-28 03:15:25,446 | INFO     | sum of square deviations: 1318248365.3642006
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | sum of deviations: 13511070879.530842
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | mean x: 1764294741.7098765
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | mean y: 3564716.5432098764
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | intersect: -18079151662.202282
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | chi2: 0.8480546236389206
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | current chi2=0.8480546236389206 (change=62.25434187151561 %)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | sum of square deviations: 1199920655.4777038
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | sum of deviations: 7403312991.1465
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | mean x: 1764294894.2038217
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | mean y: 3572568.0891719745
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | intersect: -10881836605.297037
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | chi2: 0.8351836843598356
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | current chi2=0.8351836843598356 (change=1.5177016810376016 %)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,447 | INFO     | left removable region: 20
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | sum of square deviations: 779948767.8161771
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | sum of deviations: 17433633567.102943
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | mean x: 1764294863.7132354
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | mean y: 3609295.720588235
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | intersect: -39432404231.70589
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | chi2: 0.014861680853074344
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | current memory leak: 22.35 B/s (using 136 data points, chi2=0.01)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | could have reported an average CPU frequency of 3872 MHz (9 samples)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | ..............................
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | . Timing measurements:
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | . get job = 0 s
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | . initial setup = 1 s
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | . payload setup = 2 s
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | . stage-in = 0 s
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | . payload execution = 10188 s
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | . stage-out = 0 s
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | . log creation = 0 s
[2025-11-28 04:16:29] 2025-11-28 03:15:25,448 | INFO     | ..............................
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | 
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | job summary report
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | --------------------------------------------------
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | PanDA job id: 6898378136
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | task id: 47556161
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | errors: (none)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | pilot state: finished 
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | transexitcode: 0
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | exeerrorcode: 0
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | exeerrordiag: 
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | exitcode: 0
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | exitmsg: OK
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | cpuconsumptiontime: 119700 s
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | nevents: 1000
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | neventsw: 0
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | pid: 377793
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | pgrp: 377793
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | corecount: 12
[2025-11-28 04:16:29] 2025-11-28 03:15:25,480 | INFO     | event service: False
[2025-11-28 04:16:29] 2025-11-28 03:15:25,481 | INFO     | sizes: {0: 2284323, 2: 2284585, 11: 2284613, 10195: 2314370, 10197: 2323434, 10205: 2323688}
[2025-11-28 04:16:29] 2025-11-28 03:15:25,481 | INFO     | --------------------------------------------------
[2025-11-28 04:16:29] 2025-11-28 03:15:25,481 | INFO     | 
[2025-11-28 04:16:29] 2025-11-28 03:15:25,481 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | job 6898378136 has completed (purged errors)
[2025-11-28 04:16:29] 2025-11-28 03:15:25,491 | INFO     | overall cleanup function is called
[2025-11-28 04:16:29] 2025-11-28 03:15:26,504 | INFO     | --- collectZombieJob: --- 10, [377793]
[2025-11-28 04:16:29] 2025-11-28 03:15:26,504 | INFO     | zombie collector waiting for pid 377793
[2025-11-28 04:16:29] 2025-11-28 03:15:26,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 04:16:29] 2025-11-28 03:15:26,504 | INFO     | collected zombie processes
[2025-11-28 04:16:29] 2025-11-28 03:15:26,504 | INFO     | will attempt to kill all subprocesses of pid=377793
[2025-11-28 04:16:29] 2025-11-28 03:15:26,565 | INFO     | process IDs to be killed: [377793] (in reverse order)
[2025-11-28 04:16:29] 2025-11-28 03:15:26,592 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 04:16:29] 2025-11-28 03:15:26,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 04:16:29] 2025-11-28 03:15:26,595 | INFO     | did not find any defunct processes belonging to 377793
[2025-11-28 04:16:29] 2025-11-28 03:15:26,596 | INFO     | did not find any defunct processes belonging to 377793
[2025-11-28 04:16:29] 2025-11-28 03:15:26,597 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 04:16:29] 2025-11-28 03:15:26,597 | INFO     | ready for new job
[2025-11-28 04:16:29] 2025-11-28 03:15:26,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 04:16:29] 2025-11-28 03:15:26,598 | INFO     | ***************************************
[2025-11-28 04:16:29] 2025-11-28 03:15:26,598 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 04:16:29] 2025-11-28 03:15:26,598 | INFO     | ***************************************
[2025-11-28 04:16:29] 2025-11-28 03:15:26,598 | INFO     | 
[2025-11-28 04:16:29] 2025-11-28 03:15:26,599 | INFO     | architecture information:
[2025-11-28 04:16:29] 2025-11-28 03:15:26,599 | INFO     | executing command: cat /etc/os-release
[2025-11-28 04:16:29] 2025-11-28 03:15:26,606 | INFO     | cat /etc/os-release:
[2025-11-28 04:16:29] NAME="CentOS Linux"
[2025-11-28 04:16:29] VERSION="7 (Core)"
[2025-11-28 04:16:29] ID="centos"
[2025-11-28 04:16:29] ID_LIKE="rhel fedora"
[2025-11-28 04:16:29] VERSION_ID="7"
[2025-11-28 04:16:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 04:16:29] ANSI_COLOR="0;31"
[2025-11-28 04:16:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 04:16:29] HOME_URL="https://www.centos.org/"
[2025-11-28 04:16:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 04:16:29] 
[2025-11-28 04:16:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 04:16:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 04:16:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 04:16:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 04:16:29] 
[2025-11-28 04:16:29] 2025-11-28 03:15:26,606 | INFO     | ***************************************
[2025-11-28 04:16:29] 2025-11-28 03:15:27,109 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-28 04:16:29] 2025-11-28 03:15:27,117 | INFO     | sufficient remaining disk space (448798916608 B)
[2025-11-28 04:16:29] 2025-11-28 03:15:27,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 04:16:29] 2025-11-28 03:15:27,117 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 04:16:29] 2025-11-28 03:15:27,117 | INFO     | update_server=False
[2025-11-28 04:16:29] 2025-11-28 03:15:27,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 04:16:29] 2025-11-28 03:15:27,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:16:29] 2025-11-28 03:15:27,160 | INFO     | all payload control threads have been joined
[2025-11-28 04:16:29] 2025-11-28 03:15:27,467 | INFO     | all data control threads have been joined
[2025-11-28 04:16:29] 2025-11-28 03:15:27,579 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 04:16:29] 2025-11-28 03:15:27,579 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 04:16:29] 2025-11-28 03:15:27,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:16:29] 2025-11-28 03:15:27,579 | INFO     | will abort loop
[2025-11-28 04:16:29] 2025-11-28 03:15:27,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 04:16:29] 2025-11-28 03:15:28,122 | INFO     | [job] queue monitor thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:28,122 | INFO     | [job] retrieve thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:28,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 04:16:29] 2025-11-28 03:15:28,164 | INFO     | [payload] control thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:28,472 | INFO     | [data] control thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:28,582 | INFO     | [job] job monitor thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:28,584 | INFO     | all job control threads have been joined
[2025-11-28 04:16:29] 2025-11-28 03:15:28,774 | INFO     | [payload] validate_post thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:28,997 | INFO     | [job] validate thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:29,008 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:29,098 | INFO     | [payload] failed_post thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:29,204 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:29,443 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:29,519 | INFO     | [data] copytool_in thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:29,587 | INFO     | [job] control thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:29,708 | INFO     | [data] copytool_out thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:32,160 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:37,976 | INFO     | job.realtimelogging is not enabled
[2025-11-28 04:16:29] 2025-11-28 03:15:38,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 04:16:29] 2025-11-28 03:15:57,644 | INFO     | PID=371251 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-28 04:16:29] 2025-11-28 03:15:57,644 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 04:16:29] 2025-11-28 03:15:57,644 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 04:16:29] 2025-11-28 03:15:57,644 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 04:16:29] 2025-11-28 03:16:23,951 | INFO     | [monitor] cgroup control has ended
[2025-11-28 04:16:29] 2025-11-28 03:16:24,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133018686576448)>', '<ExcThread(monitor, started 133018207377152)>']
[2025-11-28 04:16:29] 2025-11-28 03:16:24,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 04:16:29] 2025-11-28 03:16:24,776 | INFO     | [monitor] control thread has ended
[2025-11-28 04:16:29] 2025-11-28 03:16:29,731 | INFO     | all workflow threads have been joined
[2025-11-28 04:16:29] 2025-11-28 03:16:29,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 04:16:29] 2025-11-28 03:16:29,732 | INFO     | traces error code: 0
[2025-11-28 04:16:29] 2025-11-28 03:16:29,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 04:16:29] 2025-11-28 03:16:29,775 [wrapper] ==== pilot stdout END ====
[2025-11-28 04:16:29] 2025-11-28 03:16:29,776 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 04:16:29] 2025-11-28 03:16:29,778 [wrapper] pilotpid: 371251
[2025-11-28 04:16:29] 2025-11-28 03:16:29,779 [wrapper] Pilot exit status: 0
[2025-11-28 04:16:29] 2025-11-28 03:16:29,783 [wrapper] pandaids: 6898378136
[2025-11-28 04:16:29] 2025-11-28 03:16:29,803 [wrapper] cleanup supervisor_pilot  408699 371252
[2025-11-28 04:16:29] 2025-11-28 03:16:29,804 [wrapper] Test setup, not cleaning
[2025-11-28 04:16:29] 2025-11-28 03:16:29,805 [wrapper] apfmon messages muted
[2025-11-28 04:16:29] 2025-11-28 03:16:29,807 [wrapper] ==== wrapper stdout END ====
[2025-11-28 04:16:29] 2025-11-28 03:16:29,808 [wrapper] ==== wrapper stderr END ====
[2025-11-28 04:16:29]  *** Error codes and diagnostics ***
[2025-11-28 04:16:29]     "exeErrorCode": 0,
[2025-11-28 04:16:29]     "exeErrorDiag": "",
[2025-11-28 04:16:29]     "pilotErrorCode": 0,
[2025-11-28 04:16:29]     "pilotErrorDiag": "",
[2025-11-28 04:16:29]  *** Listing of results directory ***
[2025-11-28 04:16:29] total 1302872
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc    576529 Nov 26 17:12 pilot3.tar.gz
[2025-11-28 04:16:29] -rwx------ 1 boinc boinc     36292 Nov 26 17:38 runpilot2-wrapper.sh
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc      5112 Nov 26 17:41 queuedata.json
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc       100 Nov 28 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 04:16:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 01:25 run_atlas
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc       105 Nov 28 01:25 job.xml
[2025-11-28 04:16:29] -rw-r--r-- 2 boinc boinc 409379060 Nov 28 01:25 EVNT.47483658._002589.pool.root.1
[2025-11-28 04:16:29] drwxrwx--x 2 boinc boinc      4096 Nov 28 01:25 shared
[2025-11-28 04:16:29] -rw-r--r-- 2 boinc boinc    590107 Nov 28 01:25 input.tar.gz
[2025-11-28 04:16:29] -rw-r--r-- 2 boinc boinc     15847 Nov 28 01:25 start_atlas.sh
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc         0 Nov 28 01:25 boinc_setup_complete
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc      9642 Nov 28 01:25 init_data.xml
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc         0 Nov 28 01:25 boinc_lockfile
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc      2787 Nov 28 01:25 pandaJob.out
[2025-11-28 04:16:29] -rw------- 1 boinc boinc    991826 Nov 28 01:25 agis_schedconf.cvmfs.json
[2025-11-28 04:16:29] -rw------- 1 boinc boinc   1516240 Nov 28 01:25 agis_ddmendpoints.agis.ALL.json
[2025-11-28 04:16:29] drwx------ 5 boinc boinc      4096 Nov 28 01:25 pilot3
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc       532 Nov 28 04:11 boinc_task_state.xml
[2025-11-28 04:16:29] -rw------- 1 boinc boinc 914057964 Nov 28 04:14 HITS.47556161._005719.pool.root.1
[2025-11-28 04:16:29] -rw------- 1 boinc boinc      1032 Nov 28 04:15 memory_monitor_summary.json
[2025-11-28 04:16:29] -rw------- 1 boinc boinc   1915654 Nov 28 04:15 log.47556161._005719.job.log.tgz.1
[2025-11-28 04:16:29] -rw------- 1 boinc boinc      8550 Nov 28 04:15 heartbeat.json
[2025-11-28 04:16:29] -rw------- 1 boinc boinc        95 Nov 28 04:15 pilot_heartbeat.json
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc      8192 Nov 28 04:16 boinc_mmap_file
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc        29 Nov 28 04:16 wrapper_checkpoint.txt
[2025-11-28 04:16:29] -rw------- 1 boinc boinc      5013 Nov 28 04:16 pilotlog.txt
[2025-11-28 04:16:29] -rw------- 1 boinc boinc   1471638 Nov 28 04:16 log.47556161._005719.job.log.1
[2025-11-28 04:16:29] -rw------- 1 boinc boinc       353 Nov 28 04:16 output.list
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc       620 Nov 28 04:16 runtime_log
[2025-11-28 04:16:29] -rw------- 1 boinc boinc   3409920 Nov 28 04:16 result.tar.gz
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc      8895 Nov 28 04:16 runtime_log.err
[2025-11-28 04:16:29] -rw------- 1 boinc boinc       653 Nov 28 04:16 rdVLDmliXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8HNKDmRKBRrn.diag
[2025-11-28 04:16:29] -rw-r--r-- 1 boinc boinc     21353 Nov 28 04:16 stderr.txt
[2025-11-28 04:16:29] HITS file was successfully produced:
[2025-11-28 04:16:29] -rw------- 1 boinc boinc 914057964 Nov 28 04:14 shared/HITS.pool.root.1
[2025-11-28 04:16:29]  *** Contents of shared directory: ***
[2025-11-28 04:16:29] total 1296360
[2025-11-28 04:16:29] -rw-r--r-- 2 boinc boinc 409379060 Nov 28 01:25 ATLAS.root_0
[2025-11-28 04:16:29] -rw-r--r-- 2 boinc boinc    590107 Nov 28 01:25 input.tar.gz
[2025-11-28 04:16:29] -rw-r--r-- 2 boinc boinc     15847 Nov 28 01:25 start_atlas.sh
[2025-11-28 04:16:29] -rw------- 1 boinc boinc 914057964 Nov 28 04:14 HITS.pool.root.1
[2025-11-28 04:16:29] -rw------- 1 boinc boinc   3409920 Nov 28 04:16 result.tar.gz
04:16:31 (367458): run_atlas exited; CPU time 119548.982081
04:16:31 (367458): called boinc_finish(0)

</stderr_txt>
]]>

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