Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:10:24 (3183618): wrapper (7.7.26015): starting
16:10:24 (3183618): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 16:10:24] Arguments: --nthreads 8
[2025-11-27 16:10:24] Threads: 8
[2025-11-27 16:10:24] Checking for CVMFS
[2025-11-27 16:10:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 16:10:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 16:10:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 16:10:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 16:10:26] 2.13.3.0 10223 31990 261512 153384 2 948 34617556 40960001 45779 16776704 0 415970311 99.758 265823805 50926 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 16:10:26] CVMFS is ok
[2025-11-27 16:10:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 16:10:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 16:10:26] Further information can be found at the LHC@home message board.
[2025-11-27 16:10:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 16:10:26] Checking for apptainer binary...
[2025-11-27 16:10:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 16:10:26] Running /usr/bin/apptainer --version
[2025-11-27 16:10:26] apptainer version 1.4.4-1.el9
[2025-11-27 16:10:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 16:10:27] c8-7-6.aglt2.org
[2025-11-27 16:10:27] apptainer works
[2025-11-27 16:10:27] Set ATHENA_PROC_NUMBER=8
[2025-11-27 16:10:27] Set ATHENA_CORE_NUMBER=8
[2025-11-27 16:10:27] Starting ATLAS job with PandaID=6898687911
[2025-11-27 16:10:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:54:18]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:54:18] 2025-11-28 06:15:32,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:54:18] 2025-11-28 06:15:34,281 | INFO     | PID=3201052 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:54:18] 2025-11-28 06:15:34,282 | INFO     | .. there are 72 such processes running
[2025-11-28 01:54:18] 2025-11-28 06:15:35,203 | INFO     | monitor loop #1976: job 0:6898687911 is in state 'finished'
[2025-11-28 01:54:18] 2025-11-28 06:15:35,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:54:18] 2025-11-28 06:15:35,283 | INFO     | time since job start (32622s) is within the limit (172800.0s)
[2025-11-28 01:54:18] 2025-11-28 06:15:37,307 | INFO     | time since job start (32624s) is within the limit (172800.0s)
[2025-11-28 01:54:18] 2025-11-28 06:15:37,727 | INFO     | monitor loop #1977: job 0:6898687911 is in state 'finished'
[2025-11-28 01:54:18] 2025-11-28 06:15:37,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:54:18] 2025-11-28 06:15:39,314 | INFO     | time since job start (32626s) is within the limit (172800.0s)
[2025-11-28 01:54:18] 2025-11-28 06:15:40,234 | INFO     | monitor loop #1978: job 0:6898687911 is in state 'finished'
[2025-11-28 01:54:18] 2025-11-28 06:15:40,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:54:18] 2025-11-28 06:15:41,334 | INFO     | time since job start (32628s) is within the limit (172800.0s)
[2025-11-28 01:54:18] 2025-11-28 06:15:42,742 | INFO     | monitor loop #1979: job 0:6898687911 is in state 'finished'
[2025-11-28 01:54:18] 2025-11-28 06:15:42,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:54:18] 2025-11-28 06:15:43,348 | INFO     | time since job start (32630s) is within the limit (172800.0s)
[2025-11-28 01:54:18] 2025-11-28 06:15:44,776 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 01:54:18] 2025-11-28 06:15:44,786 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3768.5963124999994
[2025-11-28 01:54:18] 2025-11-28 06:15:44,866 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6898687911/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:54:18] 2025-11-28 06:15:44,867 | INFO     | extracted standard info from prmon json
[2025-11-28 01:54:18] 2025-11-28 06:15:44,867 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:54:18] 2025-11-28 06:15:44,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:54:18] 2025-11-28 06:15:44,888 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:54:18] 2025-11-28 06:15:44,888 | INFO     | sum of square deviations: 46426175703.796646
[2025-11-28 01:54:18] 2025-11-28 06:15:44,908 | INFO     | sum of deviations: 225651460431.77017
[2025-11-28 01:54:18] 2025-11-28 06:15:44,908 | INFO     | mean x: 1764294262.8757062
[2025-11-28 01:54:18] 2025-11-28 06:15:44,908 | INFO     | mean y: 2686906.6177024483
[2025-11-28 01:54:18] 2025-11-28 06:15:44,908 | INFO     | intersect: -8572552621.817964
[2025-11-28 01:54:18] 2025-11-28 06:15:44,908 | INFO     | chi2: 38.59321366023791
[2025-11-28 01:54:18] 2025-11-28 06:15:44,925 | INFO     | sum of square deviations: 45127158282.42581
[2025-11-28 01:54:18] 2025-11-28 06:15:44,929 | INFO     | sum of deviations: 390821124609.6453
[2025-11-28 01:54:18] 2025-11-28 06:15:44,929 | INFO     | mean x: 1764294110.3840303
[2025-11-28 01:54:18] 2025-11-28 06:15:44,945 | INFO     | mean y: 2706303.600760456
[2025-11-28 01:54:18] 2025-11-28 06:15:44,945 | INFO     | intersect: -15276860028.653458
[2025-11-28 01:54:18] 2025-11-28 06:15:44,945 | INFO     | chi2: 34.8959783393058
[2025-11-28 01:54:18] 2025-11-28 06:15:44,945 | INFO     | current chi2=34.8959783393058 (change=9.580014127564926 %)
[2025-11-28 01:54:18] 2025-11-28 06:15:44,945 | INFO     | right removable region: 525
[2025-11-28 01:54:18] 2025-11-28 06:15:44,946 | INFO     | sum of square deviations: 45126874632.425766
[2025-11-28 01:54:18] 2025-11-28 06:15:44,965 | INFO     | sum of deviations: 14716748352.752907
[2025-11-28 01:54:18] 2025-11-28 06:15:44,965 | INFO     | mean x: 1764294415.3840303
[2025-11-28 01:54:18] 2025-11-28 06:15:44,965 | INFO     | mean y: 2711661.946768061
[2025-11-28 01:54:18] 2025-11-28 06:15:44,966 | INFO     | intersect: -572658938.0087017
[2025-11-28 01:54:18] 2025-11-28 06:15:44,966 | INFO     | chi2: 33.61329741784947
[2025-11-28 01:54:18] 2025-11-28 06:15:44,966 | INFO     | current chi2=33.61329741784947 (change=12.90360602314696 %)
[2025-11-28 01:54:18] 2025-11-28 06:15:44,966 | INFO     | left removable region: 10
[2025-11-28 01:54:18] 2025-11-28 06:15:44,966 | INFO     | sum of square deviations: 42354544031.14551
[2025-11-28 01:54:18] 2025-11-28 06:15:44,986 | INFO     | sum of deviations: 28578754138.485916
[2025-11-28 01:54:18] 2025-11-28 06:15:44,986 | INFO     | mean x: 1764294384.9029126
[2025-11-28 01:54:18] 2025-11-28 06:15:44,986 | INFO     | mean y: 2758969.809708738
[2025-11-28 01:54:18] 2025-11-28 06:15:44,986 | INFO     | intersect: -1187699730.8429093
[2025-11-28 01:54:18] 2025-11-28 06:15:44,986 | INFO     | chi2: 25.144253319132627
[2025-11-28 01:54:18] 2025-11-28 06:15:44,986 | INFO     | current memory leak: 0.67 B/s (using 515 data points, chi2=25.14)
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | could have reported an average CPU frequency of 3770 MHz (21 samples)
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | ..............................
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | . Timing measurements:
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | . get job = 0 s
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | . initial setup = 6 s
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | . payload setup = 62 s
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | . stage-in = 0 s
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | . payload execution = 32420 s
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | . stage-out = 6 s
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | . log creation = 2 s
[2025-11-28 01:54:18] 2025-11-28 06:15:44,987 | INFO     | ..............................
[2025-11-28 01:54:18] 2025-11-28 06:15:45,355 | INFO     | time since job start (32632s) is within the limit (172800.0s)
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | 
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | job summary report
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | --------------------------------------------------
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | PanDA job id: 6898687911
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | task id: 47556161
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | errors: (none)
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | pilot state: finished 
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | transexitcode: 0
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | exeerrorcode: 0
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | exeerrordiag: 
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | exitcode: 0
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | exitmsg: OK
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | cpuconsumptiontime: 132315 s
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | nevents: 1000
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | neventsw: 0
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | pid: 3239178
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | pgrp: 3239178
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | corecount: 8
[2025-11-28 01:54:18] 2025-11-28 06:15:45,748 | INFO     | event service: False
[2025-11-28 01:54:18] 2025-11-28 06:15:45,749 | INFO     | sizes: {0: 2283488, 1: 2284344, 11: 2284344, 22: 2284372, 33: 2284718, 44: 2284718, 32483: 2324444, 32484: 2324443, 32490: 2333493, 32491: 2333549, 32544: 2333795}
[2025-11-28 01:54:18] 2025-11-28 06:15:45,749 | INFO     | --------------------------------------------------
[2025-11-28 01:54:18] 2025-11-28 06:15:45,749 | INFO     | 
[2025-11-28 01:54:18] 2025-11-28 06:15:45,749 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-28 01:54:18] 2025-11-28 06:15:45,897 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,897 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:54:18] 2025-11-28 06:15:45,898 | INFO     | job 6898687911 has completed (purged errors)
[2025-11-28 01:54:18] 2025-11-28 06:15:45,899 | INFO     | overall cleanup function is called
[2025-11-28 01:54:18] 2025-11-28 06:15:46,933 | INFO     | --- collectZombieJob: --- 10, [3239178]
[2025-11-28 01:54:18] 2025-11-28 06:15:46,933 | INFO     | zombie collector waiting for pid 3239178
[2025-11-28 01:54:18] 2025-11-28 06:15:46,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:54:18] 2025-11-28 06:15:46,933 | INFO     | collected zombie processes
[2025-11-28 01:54:18] 2025-11-28 06:15:46,933 | INFO     | will attempt to kill all subprocesses of pid=3239178
[2025-11-28 01:54:18] 2025-11-28 06:15:48,312 | INFO     | process IDs to be killed: [3239178] (in reverse order)
[2025-11-28 01:54:18] 2025-11-28 06:15:48,700 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:54:18] 2025-11-28 06:15:48,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:54:18] 2025-11-28 06:15:48,763 | INFO     | did not find any defunct processes belonging to 3239178
[2025-11-28 01:54:18] 2025-11-28 06:15:48,827 | INFO     | did not find any defunct processes belonging to 3239178
[2025-11-28 01:54:18] 2025-11-28 06:15:48,831 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:54:18] 2025-11-28 06:15:48,831 | INFO     | ready for new job
[2025-11-28 01:54:18] 2025-11-28 06:15:48,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:54:18] 2025-11-28 06:15:48,834 | INFO     | ***************************************
[2025-11-28 01:54:18] 2025-11-28 06:15:48,834 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:54:18] 2025-11-28 06:15:48,834 | INFO     | ***************************************
[2025-11-28 01:54:18] 2025-11-28 06:15:48,834 | INFO     | 
[2025-11-28 01:54:18] 2025-11-28 06:15:48,842 | INFO     | architecture information:
[2025-11-28 01:54:18] 2025-11-28 06:15:48,843 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:54:18] 2025-11-28 06:15:48,898 | INFO     | cat /etc/os-release:
[2025-11-28 01:54:18] NAME="CentOS Linux"
[2025-11-28 01:54:18] VERSION="7 (Core)"
[2025-11-28 01:54:18] ID="centos"
[2025-11-28 01:54:18] ID_LIKE="rhel fedora"
[2025-11-28 01:54:18] VERSION_ID="7"
[2025-11-28 01:54:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:54:18] ANSI_COLOR="0;31"
[2025-11-28 01:54:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:54:18] HOME_URL="https://www.centos.org/"
[2025-11-28 01:54:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:54:18] 
[2025-11-28 01:54:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:54:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:54:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:54:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:54:18] 
[2025-11-28 01:54:18] 2025-11-28 06:15:48,898 | INFO     | ***************************************
[2025-11-28 01:54:18] 2025-11-28 06:15:49,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-28 01:54:18] 2025-11-28 06:15:49,501 | INFO     | sufficient remaining disk space (157149036544 B)
[2025-11-28 01:54:18] 2025-11-28 06:15:49,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:54:18] 2025-11-28 06:15:49,501 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:54:18] 2025-11-28 06:15:49,501 | INFO     | update_server=False
[2025-11-28 01:54:18] 2025-11-28 06:15:49,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:54:18] 2025-11-28 06:15:49,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:54:18] 2025-11-28 06:15:49,502 | INFO     | aborting loop
[2025-11-28 01:54:18] 2025-11-28 06:15:49,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:54:18] 2025-11-28 06:15:49,895 | INFO     | all job control threads have been joined
[2025-11-28 01:54:18] 2025-11-28 06:15:50,177 | INFO     | all payload control threads have been joined
[2025-11-28 01:54:18] 2025-11-28 06:15:50,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:54:18] 2025-11-28 06:15:50,507 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:50,507 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:50,540 | INFO     | all data control threads have been joined
[2025-11-28 01:54:18] 2025-11-28 06:15:50,596 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:50,596 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:50,615 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:50,615 | INFO     | [job] validate thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:50,901 | INFO     | [job] control thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:51,039 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:51,183 | INFO     | [payload] control thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:51,283 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:51,399 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:51,513 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:51,546 | INFO     | [data] control thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:51,641 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:51,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:54:18] 2025-11-28 06:15:51,967 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:15:55,702 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:54:18] 2025-11-28 06:16:19,805 | INFO     | PID=3201052 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:54:18] 2025-11-28 06:16:19,805 | INFO     | .. there are 72 such processes running
[2025-11-28 01:54:18] 2025-11-28 06:16:19,805 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:54:18] 2025-11-28 06:16:19,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:54:18] 2025-11-28 06:16:19,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:54:18] 2025-11-28 06:16:49,345 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:54:18] 2025-11-28 06:16:50,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503660361536)>', '<ExcThread(monitor, started 140502942873344)>']
[2025-11-28 01:54:18] 2025-11-28 06:16:51,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:54:18] 2025-11-28 06:16:51,063 | INFO     | [monitor] control thread has ended
[2025-11-28 01:54:18] 2025-11-28 06:16:55,456 | INFO     | all workflow threads have been joined
[2025-11-28 01:54:18] 2025-11-28 06:16:55,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:54:18] 2025-11-28 06:16:55,456 | INFO     | traces error code: 0
[2025-11-28 01:54:18] 2025-11-28 06:16:55,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:54:18] 2025-11-28 06:16:55,789 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:54:18] 2025-11-28 06:16:55,832 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:54:18] 2025-11-28 06:16:55,871 [wrapper] pilotpid: 3201052
[2025-11-28 01:54:18] 2025-11-28 06:16:55,960 [wrapper] Pilot exit status: 0
[2025-11-28 01:54:18] 2025-11-28 06:16:56,210 [wrapper] pandaids: 6898687911
[2025-11-28 01:54:18] 2025-11-28 06:16:57,807 [wrapper] cleanup supervisor_pilot 2604788 3201054
[2025-11-28 01:54:18] 2025-11-28 06:16:57,848 [wrapper] Test setup, not cleaning
[2025-11-28 01:54:18] 2025-11-28 06:16:57,874 [wrapper] apfmon messages muted
[2025-11-28 01:54:18] 2025-11-28 06:16:57,914 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:54:18] 2025-11-28 06:16:57,947 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:54:18]  *** Error codes and diagnostics ***
[2025-11-28 01:54:18]     "exeErrorCode": 0,
[2025-11-28 01:54:18]     "exeErrorDiag": "",
[2025-11-28 01:54:18]     "pilotErrorCode": 0,
[2025-11-28 01:54:18]     "pilotErrorDiag": "",
[2025-11-28 01:54:18]  *** Listing of results directory ***
[2025-11-28 01:54:18] total 1305704
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-28 01:54:18] -rwx------. 1 boincer umatlas     36292 Nov 26 11:39 runpilot2-wrapper.sh
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas       100 Nov 27 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:54:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 16:10 run_atlas
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas       105 Nov 27 16:10 job.xml
[2025-11-28 01:54:18] -rw-r--r--. 2 boincer umatlas 408083542 Nov 27 16:10 EVNT.47483658._002677.pool.root.1
[2025-11-28 01:54:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 16:10 start_atlas.sh
[2025-11-28 01:54:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 16:10 shared
[2025-11-28 01:54:18] -rw-r--r--. 2 boincer umatlas    590111 Nov 27 16:10 input.tar.gz
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas         0 Nov 27 16:10 boinc_lockfile
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 16:10 pandaJob.out
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas        57 Nov 27 16:10 setup.sh.local
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas    991500 Nov 27 16:11 agis_schedconf.cvmfs.json
[2025-11-28 01:54:18] drwx------. 5 boincer umatlas      4096 Nov 27 16:11 pilot3
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas       533 Nov 28 00:43 boinc_task_state.xml
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas 913205318 Nov 28 01:13 HITS.47556161._006595.pool.root.1
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas      1050 Nov 28 01:14 memory_monitor_summary.json
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas   1516240 Nov 28 01:14 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas   1776908 Nov 28 01:14 log.47556161._006595.job.log.tgz.1
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas        95 Nov 28 01:15 pilot_heartbeat.json
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas      8591 Nov 28 01:15 heartbeat.json
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas      4825 Nov 28 01:16 pilotlog.txt
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas   4140415 Nov 28 01:16 log.47556161._006595.job.log.1
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas       353 Nov 28 01:16 output.list
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas       620 Nov 28 01:16 runtime_log
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas   5939200 Nov 28 01:16 result.tar.gz
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas      9333 Nov 28 01:16 runtime_log.err
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas       658 Nov 28 01:16 aSLKDmwiXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuBKKDmCqylgn.diag
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas      7174 Nov 28 01:54 init_data.xml
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 01:54 boinc_mmap_file
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas        29 Nov 28 01:54 wrapper_checkpoint.txt
[2025-11-28 01:54:18] -rw-r--r--. 1 boincer umatlas     21895 Nov 28 01:54 stderr.txt
[2025-11-28 01:54:18] HITS file was successfully produced:
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas 913205318 Nov 28 01:13 shared/HITS.pool.root.1
[2025-11-28 01:54:18]  *** Contents of shared directory: ***
[2025-11-28 01:54:18] total 1296724
[2025-11-28 01:54:18] -rw-r--r--. 2 boincer umatlas 408083542 Nov 27 16:10 ATLAS.root_0
[2025-11-28 01:54:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 16:10 start_atlas.sh
[2025-11-28 01:54:18] -rw-r--r--. 2 boincer umatlas    590111 Nov 27 16:10 input.tar.gz
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas 913205318 Nov 28 01:13 HITS.pool.root.1
[2025-11-28 01:54:18] -rw-------. 1 boincer umatlas   5939200 Nov 28 01:16 result.tar.gz
01:54:20 (3183618): run_atlas exited; CPU time 133029.377980
01:54:20 (3183618): called boinc_finish(0)

</stderr_txt>
]]>

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