Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:22:32 (1476010): wrapper (7.7.26015): starting
03:22:32 (1476010): wrapper: running run_atlas (--nthreads 4)
[2025-12-01 03:22:32] Arguments: --nthreads 4
[2025-12-01 03:22:32] Threads: 4
[2025-12-01 03:22:32] Checking for CVMFS
[2025-12-01 03:22:32] No cvmfs_config command found, will try listing directly
[2025-12-01 03:22:32] CVMFS is ok
[2025-12-01 03:22:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 03:22:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 03:22:32] Further information can be found at the LHC@home message board.
[2025-12-01 03:22:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 03:22:32] Checking for apptainer binary...
[2025-12-01 03:22:32] which: no apptainer in ((null))
[2025-12-01 03:22:32] apptainer is not installed, using version from CVMFS
[2025-12-01 03:22:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 03:22:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-12-01 03:22:32] apptainer works
[2025-12-01 03:22:32] Set ATHENA_PROC_NUMBER=4
[2025-12-01 03:22:32] Set ATHENA_CORE_NUMBER=4
[2025-12-01 03:22:33] Starting ATLAS job with PandaID=6898687886
[2025-12-01 03:22:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 20:59:32]  *** The last 200 lines of the pilot log: ***
[2025-12-01 20:59:32] 2025-12-01 19:48:55,530 | INFO     | .. there are 4 such processes running
[2025-12-01 20:59:32] 2025-12-01 19:48:55,681 | INFO     | monitor loop #4448: job 0:6898687886 is in state 'finished'
[2025-12-01 20:59:32] 2025-12-01 19:48:55,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 20:59:32] 2025-12-01 19:48:55,693 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-01 20:59:32] 2025-12-01 19:48:55,702 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2706.625125
[2025-12-01 20:59:32] 2025-12-01 19:48:55,713 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6898687886/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 20:59:32] 2025-12-01 19:48:55,714 | INFO     | extracted standard info from prmon json
[2025-12-01 20:59:32] 2025-12-01 19:48:55,714 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 20:59:32] 2025-12-01 19:48:55,714 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 20:59:32] 2025-12-01 19:48:55,731 | INFO     | fitting pss+swap vs Time
[2025-12-01 20:59:32] 2025-12-01 19:48:55,732 | INFO     | sum of square deviations: 337849589716.8356
[2025-12-01 20:59:32] 2025-12-01 19:48:55,751 | INFO     | sum of deviations: 1002237454626.483
[2025-12-01 20:59:32] 2025-12-01 19:48:55,752 | INFO     | mean x: 1764587146.0126336
[2025-12-01 20:59:32] 2025-12-01 19:48:55,752 | INFO     | mean y: 2289907.116618076
[2025-12-01 20:59:32] 2025-12-01 19:48:55,752 | INFO     | intersect: -5232392577.383623
[2025-12-01 20:59:32] 2025-12-01 19:48:55,753 | INFO     | chi2: 4.105582780565603
[2025-12-01 20:59:32] 2025-12-01 19:48:55,755 | INFO     | sum of square deviations: 332948552951.83105
[2025-12-01 20:59:32] 2025-12-01 19:48:55,774 | INFO     | sum of deviations: 1219258987258.94
[2025-12-01 20:59:32] 2025-12-01 19:48:55,774 | INFO     | mean x: 1764586993.5126953
[2025-12-01 20:59:32] 2025-12-01 19:48:55,774 | INFO     | mean y: 2296653.92578125
[2025-12-01 20:59:32] 2025-12-01 19:48:55,774 | INFO     | intersect: -6459628263.801225
[2025-12-01 20:59:32] 2025-12-01 19:48:55,775 | INFO     | chi2: 1.8438195126615302
[2025-12-01 20:59:32] 2025-12-01 19:48:55,776 | INFO     | current chi2=1.8438195126615302 (change=55.08994432192359 %)
[2025-12-01 20:59:32] 2025-12-01 19:48:55,777 | INFO     | sum of square deviations: 328095144986.8342
[2025-12-01 20:59:32] 2025-12-01 19:48:55,795 | INFO     | sum of deviations: 1221334804480.628
[2025-12-01 20:59:32] 2025-12-01 19:48:55,796 | INFO     | mean x: 1764586841.0127575
[2025-12-01 20:59:32] 2025-12-01 19:48:55,796 | INFO     | mean y: 2296717.182531894
[2025-12-01 20:59:32] 2025-12-01 19:48:55,796 | INFO     | intersect: -6566381172.104391
[2025-12-01 20:59:32] 2025-12-01 19:48:55,797 | INFO     | chi2: 1.8078582785673656
[2025-12-01 20:59:32] 2025-12-01 19:48:55,797 | INFO     | current chi2=1.8078582785673656 (change=1.9503662829912802 %)
[2025-12-01 20:59:32] 2025-12-01 19:48:55,797 | INFO     | right removable region: 1018
[2025-12-01 20:59:32] 2025-12-01 19:48:55,799 | INFO     | sum of square deviations: 332948545021.83105
[2025-12-01 20:59:32] 2025-12-01 19:48:55,817 | INFO     | sum of deviations: 824168956055.1973
[2025-12-01 20:59:32] 2025-12-01 19:48:55,817 | INFO     | mean x: 1764587298.5126953
[2025-12-01 20:59:32] 2025-12-01 19:48:55,818 | INFO     | mean y: 2295438.3291015625
[2025-12-01 20:59:32] 2025-12-01 19:48:55,818 | INFO     | intersect: -4365701038.688423
[2025-12-01 20:59:32] 2025-12-01 19:48:55,819 | INFO     | chi2: 2.440803513174166
[2025-12-01 20:59:32] 2025-12-01 19:48:55,819 | INFO     | current chi2=2.440803513174166 (change=40.549158459839646 %)
[2025-12-01 20:59:32] 2025-12-01 19:48:55,820 | INFO     | sum of square deviations: 328095129126.8342
[2025-12-01 20:59:32] 2025-12-01 19:48:55,839 | INFO     | sum of deviations: 811496829520.6942
[2025-12-01 20:59:32] 2025-12-01 19:48:55,839 | INFO     | mean x: 1764587451.0127575
[2025-12-01 20:59:32] 2025-12-01 19:48:55,840 | INFO     | mean y: 2295836.0235525025
[2025-12-01 20:59:32] 2025-12-01 19:48:55,840 | INFO     | intersect: -4362161282.616857
[2025-12-01 20:59:32] 2025-12-01 19:48:55,841 | INFO     | chi2: 2.4395581233850945
[2025-12-01 20:59:32] 2025-12-01 19:48:55,841 | INFO     | current chi2=2.4395581233850945 (change=0.05102376255809497 %)
[2025-12-01 20:59:32] 2025-12-01 19:48:55,841 | INFO     | left removable region: 20
[2025-12-01 20:59:32] 2025-12-01 19:48:55,842 | INFO     | sum of square deviations: 308225657839.33057
[2025-12-01 20:59:32] 2025-12-01 19:48:55,861 | INFO     | sum of deviations: 1022732276228.1887
[2025-12-01 20:59:32] 2025-12-01 19:48:55,861 | INFO     | mean x: 1764587420.513026
[2025-12-01 20:59:32] 2025-12-01 19:48:55,861 | INFO     | mean y: 2302813.331663327
[2025-12-01 20:59:32] 2025-12-01 19:48:55,861 | INFO     | intersect: -5852824633.993488
[2025-12-01 20:59:32] 2025-12-01 19:48:55,862 | INFO     | chi2: 0.11474703424969565
[2025-12-01 20:59:32] 2025-12-01 19:48:55,863 | INFO     | current memory leak: 3.32 B/s (using 998 data points, chi2=0.11)
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | could have reported an average CPU frequency of 2678 MHz (38 samples)
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | ..............................
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | . Timing measurements:
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | . get job = 0 s
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | . initial setup = 1 s
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | . payload setup = 6 s
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | . stage-in = 0 s
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | . payload execution = 62736 s
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | . stage-out = 2 s
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | . log creation = 0 s
[2025-12-01 20:59:32] 2025-12-01 19:48:55,864 | INFO     | ..............................
[2025-12-01 20:59:32] 2025-12-01 19:48:56,253 | INFO     | 
[2025-12-01 20:59:32] 2025-12-01 19:48:56,253 | INFO     | job summary report
[2025-12-01 20:59:32] 2025-12-01 19:48:56,253 | INFO     | --------------------------------------------------
[2025-12-01 20:59:32] 2025-12-01 19:48:56,253 | INFO     | PanDA job id: 6898687886
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | task id: 47556161
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | errors: (none)
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | pilot state: finished 
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | transexitcode: 0
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | exeerrorcode: 0
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | exeerrordiag: 
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | exitcode: 0
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | exitmsg: OK
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | cpuconsumptiontime: 243543 s
[2025-12-01 20:59:32] 2025-12-01 19:48:56,254 | INFO     | nevents: 1000
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | neventsw: 0
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | pid: 1487485
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | pgrp: 1487485
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | corecount: 4
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | event service: False
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | sizes: {0: 2284327, 5: 2284589, 11: 2284645, 62747: 2337798, 62750: 2346870, 62756: 2347060}
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | --------------------------------------------------
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | 
[2025-12-01 20:59:32] 2025-12-01 19:48:56,255 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-12-01 20:59:32] 2025-12-01 19:48:56,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | job 6898687886 has completed (purged errors)
[2025-12-01 20:59:32] 2025-12-01 19:48:56,276 | INFO     | overall cleanup function is called
[2025-12-01 20:59:32] 2025-12-01 19:48:57,290 | INFO     | --- collectZombieJob: --- 10, [1487485]
[2025-12-01 20:59:32] 2025-12-01 19:48:57,290 | INFO     | zombie collector waiting for pid 1487485
[2025-12-01 20:59:32] 2025-12-01 19:48:57,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 20:59:32] 2025-12-01 19:48:57,290 | INFO     | collected zombie processes
[2025-12-01 20:59:32] 2025-12-01 19:48:57,290 | INFO     | will attempt to kill all subprocesses of pid=1487485
[2025-12-01 20:59:32] 2025-12-01 19:48:57,701 | INFO     | process IDs to be killed: [1487485] (in reverse order)
[2025-12-01 20:59:32] 2025-12-01 19:48:57,814 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 20:59:32] 2025-12-01 19:48:57,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 20:59:32] 2025-12-01 19:48:57,828 | INFO     | did not find any defunct processes belonging to 1487485
[2025-12-01 20:59:32] 2025-12-01 19:48:57,841 | INFO     | did not find any defunct processes belonging to 1487485
[2025-12-01 20:59:32] 2025-12-01 19:48:57,842 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 20:59:32] 2025-12-01 19:48:57,843 | INFO     | ready for new job
[2025-12-01 20:59:32] 2025-12-01 19:48:57,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 20:59:32] 2025-12-01 19:48:57,849 | INFO     | ***************************************
[2025-12-01 20:59:32] 2025-12-01 19:48:57,849 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 20:59:32] 2025-12-01 19:48:57,849 | INFO     | ***************************************
[2025-12-01 20:59:32] 2025-12-01 19:48:57,849 | INFO     | 
[2025-12-01 20:59:32] 2025-12-01 19:48:57,853 | INFO     | architecture information:
[2025-12-01 20:59:32] 2025-12-01 19:48:57,854 | INFO     | executing command: cat /etc/os-release
[2025-12-01 20:59:32] 2025-12-01 19:48:57,868 | INFO     | cat /etc/os-release:
[2025-12-01 20:59:32] NAME="CentOS Linux"
[2025-12-01 20:59:32] VERSION="7 (Core)"
[2025-12-01 20:59:32] ID="centos"
[2025-12-01 20:59:32] ID_LIKE="rhel fedora"
[2025-12-01 20:59:32] VERSION_ID="7"
[2025-12-01 20:59:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 20:59:32] ANSI_COLOR="0;31"
[2025-12-01 20:59:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 20:59:32] HOME_URL="https://www.centos.org/"
[2025-12-01 20:59:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 20:59:32] 
[2025-12-01 20:59:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 20:59:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 20:59:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 20:59:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 20:59:32] 
[2025-12-01 20:59:32] 2025-12-01 19:48:57,868 | INFO     | ***************************************
[2025-12-01 20:59:32] 2025-12-01 19:48:58,370 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-12-01 20:59:32] 2025-12-01 19:48:58,384 | INFO     | sufficient remaining disk space (566740647936 B)
[2025-12-01 20:59:32] 2025-12-01 19:48:58,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 20:59:32] 2025-12-01 19:48:58,385 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 20:59:32] 2025-12-01 19:48:58,385 | INFO     | update_server=False
[2025-12-01 20:59:32] 2025-12-01 19:48:58,385 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 20:59:32] 2025-12-01 19:48:58,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 20:59:32] 2025-12-01 19:48:58,783 | INFO     | all data control threads have been joined
[2025-12-01 20:59:32] 2025-12-01 19:48:59,187 | INFO     | all payload control threads have been joined
[2025-12-01 20:59:32] 2025-12-01 19:48:59,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 20:59:32] 2025-12-01 19:48:59,188 | INFO     | aborting loop
[2025-12-01 20:59:32] 2025-12-01 19:48:59,390 | INFO     | [job] retrieve thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:48:59,480 | INFO     | [payload] validate_post thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:48:59,742 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:48:59,764 | INFO     | [job] validate thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:48:59,788 | INFO     | [data] control thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:48:59,886 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:48:59,992 | INFO     | all job control threads have been joined
[2025-12-01 20:59:32] 2025-12-01 19:49:00,167 | INFO     | [payload] failed_post thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:00,192 | INFO     | [payload] control thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:00,193 | INFO     | [job] job monitor thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:00,232 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:00,271 | INFO     | [data] copytool_in thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:00,390 | INFO     | [data] copytool_out thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:00,611 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:00,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 20:59:32] 2025-12-01 19:49:00,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 20:59:32] 2025-12-01 19:49:00,997 | INFO     | [job] control thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:01,969 | INFO     | [job] queue monitor thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:04,862 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 20:59:32] 2025-12-01 19:49:27,706 | INFO     | [monitor] cgroup control has ended
[2025-12-01 20:59:32] 2025-12-01 19:49:28,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22995358201664)>', '<ExcThread(monitor, started 22994778834688)>']
[2025-12-01 20:59:32] 2025-12-01 19:49:28,095 | INFO     | PID=1479887 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 20:59:32] 2025-12-01 19:49:28,096 | INFO     | .. there are 4 such processes running
[2025-12-01 20:59:32] 2025-12-01 19:49:28,097 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 20:59:32] 2025-12-01 19:49:28,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 20:59:32] 2025-12-01 19:49:28,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 20:59:32] 2025-12-01 19:49:28,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 20:59:32] 2025-12-01 19:49:28,097 | INFO     | [monitor] control thread has ended
[2025-12-01 20:59:32] 2025-12-01 19:49:33,096 | INFO     | all workflow threads have been joined
[2025-12-01 20:59:32] 2025-12-01 19:49:33,096 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 20:59:32] 2025-12-01 19:49:33,096 | INFO     | traces error code: 0
[2025-12-01 20:59:32] 2025-12-01 19:49:33,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 20:59:32] 2025-12-01 19:49:33,244 [wrapper] ==== pilot stdout END ====
[2025-12-01 20:59:32] 2025-12-01 19:49:33,246 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 20:59:32] 2025-12-01 19:49:33,249 [wrapper] pilotpid: 1479887
[2025-12-01 20:59:32] 2025-12-01 19:49:33,251 [wrapper] Pilot exit status: 0
[2025-12-01 20:59:32] 2025-12-01 19:49:33,262 [wrapper] pandaids: 6898687886
[2025-12-01 20:59:32] 2025-12-01 19:49:33,337 [wrapper] cleanup supervisor_pilot 2625567 1479888
[2025-12-01 20:59:32] 2025-12-01 19:49:33,339 [wrapper] Test setup, not cleaning
[2025-12-01 20:59:32] 2025-12-01 19:49:33,342 [wrapper] apfmon messages muted
[2025-12-01 20:59:32] 2025-12-01 19:49:33,344 [wrapper] ==== wrapper stdout END ====
[2025-12-01 20:59:32] 2025-12-01 19:49:33,347 [wrapper] ==== wrapper stderr END ====
[2025-12-01 20:59:32]  *** Error codes and diagnostics ***
[2025-12-01 20:59:32]     "exeErrorCode": 0,
[2025-12-01 20:59:32]     "exeErrorDiag": "",
[2025-12-01 20:59:32]     "pilotErrorCode": 0,
[2025-12-01 20:59:32]     "pilotErrorDiag": "",
[2025-12-01 20:59:32]  *** Listing of results directory ***
[2025-12-01 20:59:32] total 1322872
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc    576529 Nov 26 17:12 pilot3.tar.gz
[2025-12-01 20:59:32] -rwx------ 1 boinc boinc     36292 Nov 26 17:39 runpilot2-wrapper.sh
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc      5112 Nov 26 17:41 queuedata.json
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc       100 Dec  1 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 20:59:32] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 03:22 run_atlas
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc       105 Dec  1 03:22 job.xml
[2025-12-01 20:59:32] -rw-r--r-- 2 boinc boinc 411238449 Dec  1 03:22 EVNT.47483658._002674.pool.root.1
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc      6635 Dec  1 03:22 init_data.xml
[2025-12-01 20:59:32] -rw-r--r-- 2 boinc boinc     15847 Dec  1 03:22 start_atlas.sh
[2025-12-01 20:59:32] drwxrwx--x 2 boinc boinc      4096 Dec  1 03:22 shared
[2025-12-01 20:59:32] -rw-r--r-- 2 boinc boinc    590110 Dec  1 03:22 input.tar.gz
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc         0 Dec  1 03:22 boinc_lockfile
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc      2787 Dec  1 03:22 pandaJob.out
[2025-12-01 20:59:32] -rw------- 1 boinc boinc    993253 Dec  1 03:22 agis_schedconf.cvmfs.json
[2025-12-01 20:59:32] drwx------ 5 boinc boinc      4096 Dec  1 03:22 pilot3
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc       531 Dec  1 20:42 boinc_task_state.xml
[2025-12-01 20:59:32] -rw------- 1 boinc boinc 918464796 Dec  1 20:48 HITS.47556161._006570.pool.root.1
[2025-12-01 20:59:32] -rw------- 1 boinc boinc      1061 Dec  1 20:48 memory_monitor_summary.json
[2025-12-01 20:59:32] -rw------- 1 boinc boinc   1516240 Dec  1 20:48 agis_ddmendpoints.agis.ALL.json
[2025-12-01 20:59:32] -rw------- 1 boinc boinc   1758042 Dec  1 20:48 log.47556161._006570.job.log.tgz.1
[2025-12-01 20:59:32] -rw------- 1 boinc boinc      8662 Dec  1 20:48 heartbeat.json
[2025-12-01 20:59:32] -rw------- 1 boinc boinc        95 Dec  1 20:49 pilot_heartbeat.json
[2025-12-01 20:59:32] -rw------- 1 boinc boinc      4833 Dec  1 20:49 pilotlog.txt
[2025-12-01 20:59:32] -rw------- 1 boinc boinc   8738350 Dec  1 20:49 log.47556161._006570.job.log.1
[2025-12-01 20:59:32] -rw------- 1 boinc boinc       353 Dec  1 20:49 output.list
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc       620 Dec  1 20:49 runtime_log
[2025-12-01 20:59:32] -rw------- 1 boinc boinc  10516480 Dec  1 20:49 result.tar.gz
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc      9206 Dec  1 20:49 runtime_log.err
[2025-12-01 20:59:32] -rw------- 1 boinc boinc       676 Dec  1 20:49 qSHODmviXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkBKKDmdWGOEm.diag
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc        28 Dec  1 20:59 wrapper_checkpoint.txt
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc      8192 Dec  1 20:59 boinc_mmap_file
[2025-12-01 20:59:32] -rw-r--r-- 1 boinc boinc     21064 Dec  1 20:59 stderr.txt
[2025-12-01 20:59:32] HITS file was successfully produced:
[2025-12-01 20:59:32] -rw------- 1 boinc boinc 918464796 Dec  1 20:48 shared/HITS.pool.root.1
[2025-12-01 20:59:32]  *** Contents of shared directory: ***
[2025-12-01 20:59:32] total 1309420
[2025-12-01 20:59:32] -rw-r--r-- 2 boinc boinc 411238449 Dec  1 03:22 ATLAS.root_0
[2025-12-01 20:59:32] -rw-r--r-- 2 boinc boinc     15847 Dec  1 03:22 start_atlas.sh
[2025-12-01 20:59:32] -rw-r--r-- 2 boinc boinc    590110 Dec  1 03:22 input.tar.gz
[2025-12-01 20:59:32] -rw------- 1 boinc boinc 918464796 Dec  1 20:48 HITS.pool.root.1
[2025-12-01 20:59:32] -rw------- 1 boinc boinc  10516480 Dec  1 20:49 result.tar.gz
20:59:34 (1476010): run_atlas exited; CPU time 245732.455174
20:59:34 (1476010): called boinc_finish(0)

</stderr_txt>
]]>

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