Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:15:06 (2942): wrapper (7.7.26015): starting
15:15:06 (2942): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 15:15:06] Arguments: --nthreads 12
[2025-11-27 15:15:06] Threads: 12
[2025-11-27 15:15:06] Checking for CVMFS
[2025-11-27 15:15:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 15:15:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 15:15:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 15:15:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 15:15:06] 2.11.2.0 2987 289542 95608 153384 3 1 11479361 20275200 1 130560 1 129985536 99.963 17598564 13992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 15:15:06] CVMFS is ok
[2025-11-27 15:15:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 15:15:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 15:15:06] Further information can be found at the LHC@home message board.
[2025-11-27 15:15:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 15:15:06] Checking for apptainer binary...
[2025-11-27 15:15:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 15:15:06] Running /usr/bin/apptainer --version
[2025-11-27 15:15:06] apptainer version 1.3.2-1.el7
[2025-11-27 15:15:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 15:15:08] c-205-19.aglt2.org
[2025-11-27 15:15:08] apptainer works
[2025-11-27 15:15:08] Set ATHENA_PROC_NUMBER=12
[2025-11-27 15:15:08] Set ATHENA_CORE_NUMBER=12
[2025-11-27 15:15:08] Starting ATLAS job with PandaID=6898688502
[2025-11-27 15:15:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:31:27]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:31:27] 2025-11-28 03:30:52,706 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898688502/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:31:27] 2025-11-28 03:30:52,794 | INFO     | number of running child processes to parent process 13913: 1
[2025-11-27 22:31:27] 2025-11-28 03:30:52,794 | INFO     | maximum number of monitored processes: 20
[2025-11-27 22:31:27] 2025-11-28 03:30:54,081 | INFO     | time since job start (26131s) is within the limit (172800.0s)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,171 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 22:31:27] 2025-11-28 03:30:55,175 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-27 22:31:27] 2025-11-28 03:30:55,177 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898688502/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,178 | INFO     | extracted standard info from prmon json
[2025-11-27 22:31:27] 2025-11-28 03:30:55,178 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:31:27] 2025-11-28 03:30:55,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:31:27] 2025-11-28 03:30:55,185 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:31:27] 2025-11-28 03:30:55,185 | INFO     | sum of square deviations: 24311115402.493233
[2025-11-27 22:31:27] 2025-11-28 03:30:55,189 | INFO     | sum of deviations: 353137401022.9119
[2025-11-27 22:31:27] 2025-11-28 03:30:55,189 | INFO     | mean x: 1764287575.792056
[2025-11-27 22:31:27] 2025-11-28 03:30:55,189 | INFO     | mean y: 3440766.0327102803
[2025-11-27 22:31:27] 2025-11-28 03:30:55,189 | INFO     | intersect: -25624175197.170887
[2025-11-27 22:31:27] 2025-11-28 03:30:55,190 | INFO     | chi2: 5.624211690682083
[2025-11-27 22:31:27] 2025-11-28 03:30:55,190 | INFO     | sum of square deviations: 23469035412.06171
[2025-11-27 22:31:27] 2025-11-28 03:30:55,194 | INFO     | sum of deviations: 505644018536.428
[2025-11-27 22:31:27] 2025-11-28 03:30:55,194 | INFO     | mean x: 1764287423.2955084
[2025-11-27 22:31:27] 2025-11-28 03:30:55,195 | INFO     | mean y: 3468356.172576832
[2025-11-27 22:31:27] 2025-11-28 03:30:55,195 | INFO     | intersect: -38008378611.76599
[2025-11-27 22:31:27] 2025-11-28 03:30:55,195 | INFO     | chi2: 3.00779525672589
[2025-11-27 22:31:27] 2025-11-28 03:30:55,195 | INFO     | current chi2=3.00779525672589 (change=46.52058951285463 %)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,196 | INFO     | sum of square deviations: 22646630209.119663
[2025-11-27 22:31:27] 2025-11-28 03:30:55,200 | INFO     | sum of deviations: 546448171115.038
[2025-11-27 22:31:27] 2025-11-28 03:30:55,200 | INFO     | mean x: 1764287270.7990432
[2025-11-27 22:31:27] 2025-11-28 03:30:55,200 | INFO     | mean y: 3475881.09569378
[2025-11-27 22:31:27] 2025-11-28 03:30:55,200 | INFO     | intersect: -42567606153.94566
[2025-11-27 22:31:27] 2025-11-28 03:30:55,200 | INFO     | chi2: 2.6261139660114705
[2025-11-27 22:31:27] 2025-11-28 03:30:55,201 | INFO     | current chi2=2.6261139660114705 (change=12.68973643937106 %)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,201 | INFO     | right removable region: 417
[2025-11-27 22:31:27] 2025-11-28 03:30:55,201 | INFO     | sum of square deviations: 23468959162.061707
[2025-11-27 22:31:27] 2025-11-28 03:30:55,205 | INFO     | sum of deviations: 205107859980.7402
[2025-11-27 22:31:27] 2025-11-28 03:30:55,205 | INFO     | mean x: 1764287728.2955084
[2025-11-27 22:31:27] 2025-11-28 03:30:55,205 | INFO     | mean y: 3467499.442080378
[2025-11-27 22:31:27] 2025-11-28 03:30:55,205 | INFO     | intersect: -15415592112.112665
[2025-11-27 22:31:27] 2025-11-28 03:30:55,206 | INFO     | chi2: 3.143827087484502
[2025-11-27 22:31:27] 2025-11-28 03:30:55,206 | INFO     | current chi2=3.143827087484502 (change=44.10190689135973 %)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,206 | INFO     | sum of square deviations: 22646503389.71535
[2025-11-27 22:31:27] 2025-11-28 03:30:55,210 | INFO     | sum of deviations: 172028097530.1172
[2025-11-27 22:31:27] 2025-11-28 03:30:55,210 | INFO     | mean x: 1764287880.7966506
[2025-11-27 22:31:27] 2025-11-28 03:30:55,210 | INFO     | mean y: 3473626.0837320574
[2025-11-27 22:31:27] 2025-11-28 03:30:55,211 | INFO     | intersect: -13398466726.735777
[2025-11-27 22:31:27] 2025-11-28 03:30:55,211 | INFO     | chi2: 3.082103211877307
[2025-11-27 22:31:27] 2025-11-28 03:30:55,211 | INFO     | current chi2=3.082103211877307 (change=1.9633355744314365 %)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,211 | INFO     | left removable region: 20
[2025-11-27 22:31:27] 2025-11-28 03:30:55,212 | INFO     | sum of square deviations: 19401875048.12085
[2025-11-27 22:31:27] 2025-11-28 03:30:55,215 | INFO     | sum of deviations: 322001230456.32996
[2025-11-27 22:31:27] 2025-11-28 03:30:55,215 | INFO     | mean x: 1764287850.304786
[2025-11-27 22:31:27] 2025-11-28 03:30:55,215 | INFO     | mean y: 3518303.352644836
[2025-11-27 22:31:27] 2025-11-28 03:30:55,216 | INFO     | intersect: -29277304156.758877
[2025-11-27 22:31:27] 2025-11-28 03:30:55,216 | INFO     | chi2: 0.030655914929670628
[2025-11-27 22:31:27] 2025-11-28 03:30:55,216 | INFO     | current memory leak: 16.60 B/s (using 397 data points, chi2=0.03)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | could have reported an average CPU frequency of 2410 MHz (18 samples)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | ..............................
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | . Timing measurements:
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | . get job = 0 s
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | . initial setup = 2 s
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | . payload setup = 7 s
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | . stage-in = 0 s
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | . payload execution = 26096 s
[2025-11-27 22:31:27] 2025-11-28 03:30:55,217 | INFO     | . stage-out = 3 s
[2025-11-27 22:31:27] 2025-11-28 03:30:55,218 | INFO     | . log creation = 0 s
[2025-11-27 22:31:27] 2025-11-28 03:30:55,218 | INFO     | ..............................
[2025-11-27 22:31:27] 2025-11-28 03:30:55,297 | INFO     | 
[2025-11-27 22:31:27] 2025-11-28 03:30:55,297 | INFO     | job summary report
[2025-11-27 22:31:27] 2025-11-28 03:30:55,298 | INFO     | --------------------------------------------------
[2025-11-27 22:31:27] 2025-11-28 03:30:55,298 | INFO     | PanDA job id: 6898688502
[2025-11-27 22:31:27] 2025-11-28 03:30:55,298 | INFO     | task id: 47556161
[2025-11-27 22:31:27] 2025-11-28 03:30:55,298 | INFO     | errors: (none)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,298 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:31:27] 2025-11-28 03:30:55,298 | INFO     | pilot state: finished 
[2025-11-27 22:31:27] 2025-11-28 03:30:55,298 | INFO     | transexitcode: 0
[2025-11-27 22:31:27] 2025-11-28 03:30:55,298 | INFO     | exeerrorcode: 0
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | exeerrordiag: 
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | exitcode: 0
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | exitmsg: OK
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | cpuconsumptiontime: 299947 s
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | nevents: 1000
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | neventsw: 0
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | pid: 13913
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | pgrp: 13913
[2025-11-27 22:31:27] 2025-11-28 03:30:55,299 | INFO     | corecount: 12
[2025-11-27 22:31:27] 2025-11-28 03:30:55,300 | INFO     | event service: False
[2025-11-27 22:31:27] 2025-11-28 03:30:55,300 | INFO     | sizes: {0: 2283488, 1: 2284344, 6: 2284606, 12: 2284634, 26104: 2320640, 26105: 2320639, 26108: 2329817, 26111: 2329873, 26116: 2330119}
[2025-11-27 22:31:27] 2025-11-28 03:30:55,300 | INFO     | --------------------------------------------------
[2025-11-27 22:31:27] 2025-11-28 03:30:55,300 | INFO     | 
[2025-11-27 22:31:27] 2025-11-28 03:30:55,300 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 22:31:27] 2025-11-28 03:30:55,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,326 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:31:27] 2025-11-28 03:30:55,327 | INFO     | job 6898688502 has completed (purged errors)
[2025-11-27 22:31:27] 2025-11-28 03:30:55,327 | INFO     | overall cleanup function is called
[2025-11-27 22:31:27] 2025-11-28 03:30:56,344 | INFO     | --- collectZombieJob: --- 10, [13913]
[2025-11-27 22:31:27] 2025-11-28 03:30:56,344 | INFO     | zombie collector waiting for pid 13913
[2025-11-27 22:31:27] 2025-11-28 03:30:56,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:31:27] 2025-11-28 03:30:56,344 | INFO     | collected zombie processes
[2025-11-27 22:31:27] 2025-11-28 03:30:56,344 | INFO     | will attempt to kill all subprocesses of pid=13913
[2025-11-27 22:31:27] 2025-11-28 03:30:56,438 | INFO     | process IDs to be killed: [13913] (in reverse order)
[2025-11-27 22:31:27] 2025-11-28 03:30:56,490 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:31:27] 2025-11-28 03:30:56,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:31:27] 2025-11-28 03:30:56,494 | INFO     | did not find any defunct processes belonging to 13913
[2025-11-27 22:31:27] 2025-11-28 03:30:56,497 | INFO     | did not find any defunct processes belonging to 13913
[2025-11-27 22:31:27] 2025-11-28 03:30:56,499 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:31:27] 2025-11-28 03:30:56,499 | INFO     | ready for new job
[2025-11-27 22:31:27] 2025-11-28 03:30:56,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:31:27] 2025-11-28 03:30:56,502 | INFO     | ***************************************
[2025-11-27 22:31:27] 2025-11-28 03:30:56,502 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:31:27] 2025-11-28 03:30:56,502 | INFO     | ***************************************
[2025-11-27 22:31:27] 2025-11-28 03:30:56,502 | INFO     | 
[2025-11-27 22:31:27] 2025-11-28 03:30:56,502 | INFO     | architecture information:
[2025-11-27 22:31:27] 2025-11-28 03:30:56,503 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:31:27] 2025-11-28 03:30:56,518 | INFO     | cat /etc/os-release:
[2025-11-27 22:31:27] NAME="CentOS Linux"
[2025-11-27 22:31:27] VERSION="7 (Core)"
[2025-11-27 22:31:27] ID="centos"
[2025-11-27 22:31:27] ID_LIKE="rhel fedora"
[2025-11-27 22:31:27] VERSION_ID="7"
[2025-11-27 22:31:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:31:27] ANSI_COLOR="0;31"
[2025-11-27 22:31:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:31:27] HOME_URL="https://www.centos.org/"
[2025-11-27 22:31:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:31:27] 
[2025-11-27 22:31:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:31:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:31:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:31:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:31:27] 
[2025-11-27 22:31:27] 2025-11-28 03:30:56,518 | INFO     | ***************************************
[2025-11-27 22:31:27] 2025-11-28 03:30:57,021 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 22:31:27] 2025-11-28 03:30:57,036 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-27 22:31:27] 2025-11-28 03:30:57,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:31:27] 2025-11-28 03:30:57,037 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:31:27] 2025-11-28 03:30:57,037 | INFO     | update_server=False
[2025-11-27 22:31:27] 2025-11-28 03:30:57,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:31:27] 2025-11-28 03:30:57,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:31:27] 2025-11-28 03:30:57,038 | INFO     | aborting loop
[2025-11-27 22:31:27] 2025-11-28 03:30:57,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:31:27] 2025-11-28 03:30:57,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:31:27] 2025-11-28 03:30:57,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:31:27] 2025-11-28 03:30:57,794 | INFO     | all job control threads have been joined
[2025-11-27 22:31:27] 2025-11-28 03:30:57,796 | INFO     | all data control threads have been joined
[2025-11-27 22:31:27] 2025-11-28 03:30:58,042 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,043 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,044 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,302 | INFO     | all payload control threads have been joined
[2025-11-27 22:31:27] 2025-11-28 03:30:58,352 | INFO     | [job] validate thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,539 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,576 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,657 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,798 | INFO     | [job] control thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,799 | INFO     | [data] control thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:58,961 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:59,252 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:59,291 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:59,308 | INFO     | [payload] control thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:59,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:30:59,743 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:31:01,040 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:31:27] 2025-11-28 03:31:05,308 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:31:27] 2025-11-28 03:31:06,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643156174656)>', '<ExcThread(monitor, started 140642126657280)>']
[2025-11-27 22:31:27] 2025-11-28 03:31:11,582 | INFO     | all workflow threads have been joined
[2025-11-27 22:31:27] 2025-11-28 03:31:11,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:31:27] 2025-11-28 03:31:11,582 | INFO     | traces error code: 0
[2025-11-27 22:31:27] 2025-11-28 03:31:11,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:31:27] 2025-11-28 03:31:27,276 | INFO     | PID=7542 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 22:31:27] 2025-11-28 03:31:27,276 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:31:27] 2025-11-28 03:31:27,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:31:27] 2025-11-28 03:31:27,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:31:27] 2025-11-28 03:31:27,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:31:27] 2025-11-28 03:31:27,276 | INFO     | [monitor] control thread has ended
[2025-11-27 22:31:27] 2025-11-28 03:31:27,367 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:31:27] 2025-11-28 03:31:27,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:31:27] 2025-11-28 03:31:27,374 [wrapper] pilotpid: 7542
[2025-11-27 22:31:27] 2025-11-28 03:31:27,378 [wrapper] Pilot exit status: 0
[2025-11-27 22:31:27] 2025-11-28 03:31:27,392 [wrapper] pandaids: 6898688502
[2025-11-27 22:31:27] 2025-11-28 03:31:27,431 [wrapper] cleanup supervisor_pilot  6894 7543
[2025-11-27 22:31:27] 2025-11-28 03:31:27,435 [wrapper] Test setup, not cleaning
[2025-11-27 22:31:27] 2025-11-28 03:31:27,439 [wrapper] apfmon messages muted
[2025-11-27 22:31:27] 2025-11-28 03:31:27,442 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:31:27] 2025-11-28 03:31:27,446 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:31:27]  *** Error codes and diagnostics ***
[2025-11-27 22:31:27]     "exeErrorCode": 0,
[2025-11-27 22:31:27]     "exeErrorDiag": "",
[2025-11-27 22:31:27]     "pilotErrorCode": 0,
[2025-11-27 22:31:27]     "pilotErrorDiag": "",
[2025-11-27 22:31:27]  *** Listing of results directory ***
[2025-11-27 22:31:27] total 1317712
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 22:31:27] -rwx------ 1 boincer umatlas     36292 Nov 26 11:39 runpilot2-wrapper.sh
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas       100 Nov 27 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:31:27] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 15:15 run_atlas
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas       105 Nov 27 15:15 job.xml
[2025-11-27 22:31:27] -rw-r--r-- 2 boincer umatlas 407728272 Nov 27 15:15 EVNT.47483658._002682.pool.root.1
[2025-11-27 22:31:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 15:15 start_atlas.sh
[2025-11-27 22:31:27] drwxrwx--x 2 boincer umatlas      4096 Nov 27 15:15 shared
[2025-11-27 22:31:27] -rw-r--r-- 2 boincer umatlas    590115 Nov 27 15:15 input.tar.gz
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas         0 Nov 27 15:15 boinc_lockfile
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas      2787 Nov 27 15:15 pandaJob.out
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas        57 Nov 27 15:15 setup.sh.local
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas    991500 Nov 27 15:15 agis_schedconf.cvmfs.json
[2025-11-27 22:31:27] drwx------ 5 boincer umatlas      4096 Nov 27 15:15 pilot3
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas       533 Nov 27 22:20 boinc_task_state.xml
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 22:27 init_data.xml
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas 925995696 Nov 27 22:30 HITS.47556161._006645.pool.root.1
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas        95 Nov 27 22:30 pilot_heartbeat.json
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas      1061 Nov 27 22:30 memory_monitor_summary.json
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas   1516240 Nov 27 22:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas   2190812 Nov 27 22:30 log.47556161._006645.job.log.tgz.1
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas      7986 Nov 27 22:30 heartbeat.json
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 22:31 boinc_mmap_file
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas        29 Nov 27 22:31 wrapper_checkpoint.txt
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas       744 Nov 27 22:31 pilotlog.txt
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas   3656282 Nov 27 22:31 log.47556161._006645.job.log.1
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas       353 Nov 27 22:31 output.list
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas       620 Nov 27 22:31 runtime_log
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas   5867520 Nov 27 22:31 result.tar.gz
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 22:31 runtime_log.err
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas       670 Nov 27 22:31 qa1KDmwiXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPCKKDmDWofDn.diag
[2025-11-27 22:31:27] -rw-r--r-- 1 boincer umatlas     21332 Nov 27 22:31 stderr.txt
[2025-11-27 22:31:27] HITS file was successfully produced:
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas 925995696 Nov 27 22:30 shared/HITS.pool.root.1
[2025-11-27 22:31:27]  *** Contents of shared directory: ***
[2025-11-27 22:31:27] total 1308808
[2025-11-27 22:31:27] -rw-r--r-- 2 boincer umatlas 407728272 Nov 27 15:15 ATLAS.root_0
[2025-11-27 22:31:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 15:15 start_atlas.sh
[2025-11-27 22:31:27] -rw-r--r-- 2 boincer umatlas    590115 Nov 27 15:15 input.tar.gz
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas 925995696 Nov 27 22:30 HITS.pool.root.1
[2025-11-27 22:31:27] -rw------- 1 boincer umatlas   5867520 Nov 27 22:31 result.tar.gz
22:31:29 (2942): run_atlas exited; CPU time 293266.290389
22:31:29 (2942): called boinc_finish(0)

</stderr_txt>
]]>

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