Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:46:42 (2706738): wrapper (7.7.26015): starting
14:46:42 (2706738): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 14:46:42] Arguments: --nthreads 8
[2025-11-27 14:46:42] Threads: 8
[2025-11-27 14:46:42] Checking for CVMFS
[2025-11-27 14:46:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 14:46:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 14:46:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 14:46:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 14:46:44] 2.13.3.0 10223 31906 245420 153383 2 381 28305608 40960001 45329 16776704 0 415205770 99.760 264169418 50985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 14:46:44] CVMFS is ok
[2025-11-27 14:46:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 14:46:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 14:46:44] Further information can be found at the LHC@home message board.
[2025-11-27 14:46:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 14:46:44] Checking for apptainer binary...
[2025-11-27 14:46:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 14:46:44] Running /usr/bin/apptainer --version
[2025-11-27 14:46:44] apptainer version 1.4.4-1.el9
[2025-11-27 14:46:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 14:46:44] c8-7-6.aglt2.org
[2025-11-27 14:46:44] apptainer works
[2025-11-27 14:46:44] Set ATHENA_PROC_NUMBER=8
[2025-11-27 14:46:44] Set ATHENA_CORE_NUMBER=8
[2025-11-27 14:46:44] Starting ATLAS job with PandaID=6898378232
[2025-11-27 14:46:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:04:53]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:04:53] 2025-11-28 05:03:31,890 | INFO     | time since job start (33363s) is within the limit (172800.0s)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,201 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 00:04:53] 2025-11-28 05:03:32,239 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3780.763351562501
[2025-11-28 00:04:53] 2025-11-28 05:03:32,309 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6898378232/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,310 | INFO     | extracted standard info from prmon json
[2025-11-28 00:04:53] 2025-11-28 05:03:32,310 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 00:04:53] 2025-11-28 05:03:32,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 00:04:53] 2025-11-28 05:03:32,319 | INFO     | fitting pss+swap vs Time
[2025-11-28 00:04:53] 2025-11-28 05:03:32,320 | INFO     | sum of square deviations: 50191610267.309975
[2025-11-28 00:04:53] 2025-11-28 05:03:32,332 | INFO     | sum of deviations: 536674030824.3977
[2025-11-28 00:04:53] 2025-11-28 05:03:32,332 | INFO     | mean x: 1764289535.612844
[2025-11-28 00:04:53] 2025-11-28 05:03:32,332 | INFO     | mean y: 2813945.343119266
[2025-11-28 00:04:53] 2025-11-28 05:03:32,332 | INFO     | intersect: -18861860281.603058
[2025-11-28 00:04:53] 2025-11-28 05:03:32,332 | INFO     | chi2: 15.0578330521848
[2025-11-28 00:04:53] 2025-11-28 05:03:32,333 | INFO     | sum of square deviations: 48822978264.18333
[2025-11-28 00:04:53] 2025-11-28 05:03:32,340 | INFO     | sum of deviations: 726311863864.8276
[2025-11-28 00:04:53] 2025-11-28 05:03:32,341 | INFO     | mean x: 1764289383.1277778
[2025-11-28 00:04:53] 2025-11-28 05:03:32,341 | INFO     | mean y: 2835081.698148148
[2025-11-28 00:04:53] 2025-11-28 05:03:32,341 | INFO     | intersect: -26243501291.364117
[2025-11-28 00:04:53] 2025-11-28 05:03:32,341 | INFO     | chi2: 11.445452195098332
[2025-11-28 00:04:53] 2025-11-28 05:03:32,341 | INFO     | current chi2=11.445452195098332 (change=23.99004454736157 %)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,341 | INFO     | right removable region: 539
[2025-11-28 00:04:53] 2025-11-28 05:03:32,341 | INFO     | sum of square deviations: 48822442074.183334
[2025-11-28 00:04:53] 2025-11-28 05:03:32,349 | INFO     | sum of deviations: 328355579718.98865
[2025-11-28 00:04:53] 2025-11-28 05:03:32,349 | INFO     | mean x: 1764289688.1277778
[2025-11-28 00:04:53] 2025-11-28 05:03:32,349 | INFO     | mean y: 2837138.8407407408
[2025-11-28 00:04:53] 2025-11-28 05:03:32,349 | INFO     | intersect: -11862902032.034615
[2025-11-28 00:04:53] 2025-11-28 05:03:32,350 | INFO     | chi2: 11.019596895924549
[2025-11-28 00:04:53] 2025-11-28 05:03:32,350 | INFO     | current chi2=11.019596895924549 (change=26.818175910605724 %)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,354 | INFO     | sum of square deviations: 47478390630.8114
[2025-11-28 00:04:53] 2025-11-28 05:03:32,373 | INFO     | sum of deviations: 143886888261.8319
[2025-11-28 00:04:53] 2025-11-28 05:03:32,373 | INFO     | mean x: 1764289840.6429906
[2025-11-28 00:04:53] 2025-11-28 05:03:32,373 | INFO     | mean y: 2858054.355140187
[2025-11-28 00:04:53] 2025-11-28 05:03:32,373 | INFO     | intersect: -5343957029.080741
[2025-11-28 00:04:53] 2025-11-28 05:03:32,374 | INFO     | chi2: 7.966840355506931
[2025-11-28 00:04:53] 2025-11-28 05:03:32,374 | INFO     | current chi2=7.966840355506931 (change=27.702978332597983 %)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,374 | INFO     | sum of square deviations: 46159353555.92448
[2025-11-28 00:04:53] 2025-11-28 05:03:32,381 | INFO     | sum of deviations: 103944746978.75464
[2025-11-28 00:04:53] 2025-11-28 05:03:32,382 | INFO     | mean x: 1764289993.1509433
[2025-11-28 00:04:53] 2025-11-28 05:03:32,382 | INFO     | mean y: 2862669.5905660377
[2025-11-28 00:04:53] 2025-11-28 05:03:32,382 | INFO     | intersect: -3970084583.950118
[2025-11-28 00:04:53] 2025-11-28 05:03:32,382 | INFO     | chi2: 7.877605840952664
[2025-11-28 00:04:53] 2025-11-28 05:03:32,382 | INFO     | current chi2=7.877605840952664 (change=1.1200740892540328 %)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,382 | INFO     | left removable region: 30
[2025-11-28 00:04:53] 2025-11-28 05:03:32,383 | INFO     | sum of square deviations: 40886586980.44022
[2025-11-28 00:04:53] 2025-11-28 05:03:32,390 | INFO     | sum of deviations: 262094087293.03888
[2025-11-28 00:04:53] 2025-11-28 05:03:32,390 | INFO     | mean x: 1764290267.6817288
[2025-11-28 00:04:53] 2025-11-28 05:03:32,390 | INFO     | mean y: 2898523.8644400784
[2025-11-28 00:04:53] 2025-11-28 05:03:32,390 | INFO     | intersect: -11306679545.081417
[2025-11-28 00:04:53] 2025-11-28 05:03:32,391 | INFO     | chi2: 3.2357051020326697
[2025-11-28 00:04:53] 2025-11-28 05:03:32,391 | INFO     | current memory leak: 6.41 B/s (using 509 data points, chi2=3.24)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,391 | INFO     | could have reported an average CPU frequency of 3770 MHz (22 samples)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | ..............................
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | . Timing measurements:
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | . get job = 0 s
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | . initial setup = 2 s
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | . payload setup = 25 s
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | . stage-in = 0 s
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | . payload execution = 33262 s
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | . stage-out = 4 s
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | . log creation = 0 s
[2025-11-28 00:04:53] 2025-11-28 05:03:32,392 | INFO     | ..............................
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | 
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | job summary report
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | --------------------------------------------------
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | PanDA job id: 6898378232
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | task id: 47556161
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | errors: (none)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | pilot state: finished 
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | transexitcode: 0
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | exeerrorcode: 0
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | exeerrordiag: 
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | exitcode: 0
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | exitmsg: OK
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | cpuconsumptiontime: 139571 s
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | nevents: 1000
[2025-11-28 00:04:53] 2025-11-28 05:03:32,501 | INFO     | neventsw: 0
[2025-11-28 00:04:53] 2025-11-28 05:03:32,502 | INFO     | pid: 2728764
[2025-11-28 00:04:53] 2025-11-28 05:03:32,502 | INFO     | pgrp: 2728764
[2025-11-28 00:04:53] 2025-11-28 05:03:32,502 | INFO     | corecount: 8
[2025-11-28 00:04:53] 2025-11-28 05:03:32,502 | INFO     | event service: False
[2025-11-28 00:04:53] 2025-11-28 05:03:32,502 | INFO     | sizes: {0: 2284316, 11: 2284316, 17: 2284606, 21: 2284634, 33291: 2324423, 33296: 2333893, 33298: 2334077, 33323: 2334323}
[2025-11-28 00:04:53] 2025-11-28 05:03:32,502 | INFO     | --------------------------------------------------
[2025-11-28 00:04:53] 2025-11-28 05:03:32,502 | INFO     | 
[2025-11-28 00:04:53] 2025-11-28 05:03:32,502 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-28 00:04:53] 2025-11-28 05:03:32,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 00:04:53] 2025-11-28 05:03:32,546 | INFO     | job 6898378232 has completed (purged errors)
[2025-11-28 00:04:53] 2025-11-28 05:03:32,547 | INFO     | overall cleanup function is called
[2025-11-28 00:04:53] 2025-11-28 05:03:33,563 | INFO     | --- collectZombieJob: --- 10, [2728764]
[2025-11-28 00:04:53] 2025-11-28 05:03:33,563 | INFO     | zombie collector waiting for pid 2728764
[2025-11-28 00:04:53] 2025-11-28 05:03:33,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 00:04:53] 2025-11-28 05:03:33,563 | INFO     | collected zombie processes
[2025-11-28 00:04:53] 2025-11-28 05:03:33,563 | INFO     | will attempt to kill all subprocesses of pid=2728764
[2025-11-28 00:04:53] 2025-11-28 05:03:34,305 | INFO     | process IDs to be killed: [2728764] (in reverse order)
[2025-11-28 00:04:53] 2025-11-28 05:03:34,568 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 00:04:53] 2025-11-28 05:03:34,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 00:04:53] 2025-11-28 05:03:34,661 | INFO     | did not find any defunct processes belonging to 2728764
[2025-11-28 00:04:53] 2025-11-28 05:03:34,702 | INFO     | did not find any defunct processes belonging to 2728764
[2025-11-28 00:04:53] 2025-11-28 05:03:34,721 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 00:04:53] 2025-11-28 05:03:34,721 | INFO     | ready for new job
[2025-11-28 00:04:53] 2025-11-28 05:03:34,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 00:04:53] 2025-11-28 05:03:34,724 | INFO     | ***************************************
[2025-11-28 00:04:53] 2025-11-28 05:03:34,724 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:04:53] 2025-11-28 05:03:34,724 | INFO     | ***************************************
[2025-11-28 00:04:53] 2025-11-28 05:03:34,724 | INFO     | 
[2025-11-28 00:04:53] 2025-11-28 05:03:34,760 | INFO     | architecture information:
[2025-11-28 00:04:53] 2025-11-28 05:03:34,761 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:04:53] 2025-11-28 05:03:34,825 | INFO     | cat /etc/os-release:
[2025-11-28 00:04:53] NAME="CentOS Linux"
[2025-11-28 00:04:53] VERSION="7 (Core)"
[2025-11-28 00:04:53] ID="centos"
[2025-11-28 00:04:53] ID_LIKE="rhel fedora"
[2025-11-28 00:04:53] VERSION_ID="7"
[2025-11-28 00:04:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:04:53] ANSI_COLOR="0;31"
[2025-11-28 00:04:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:04:53] HOME_URL="https://www.centos.org/"
[2025-11-28 00:04:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:04:53] 
[2025-11-28 00:04:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:04:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:04:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:04:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:04:53] 
[2025-11-28 00:04:53] 2025-11-28 05:03:34,825 | INFO     | ***************************************
[2025-11-28 00:04:53] 2025-11-28 05:03:35,329 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-28 00:04:53] 2025-11-28 05:03:35,377 | INFO     | sufficient remaining disk space (154872578048 B)
[2025-11-28 00:04:53] 2025-11-28 05:03:35,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:04:53] 2025-11-28 05:03:35,378 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:04:53] 2025-11-28 05:03:35,378 | INFO     | update_server=False
[2025-11-28 00:04:53] 2025-11-28 05:03:35,378 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:04:53] 2025-11-28 05:03:35,672 | INFO     | all job control threads have been joined
[2025-11-28 00:04:53] 2025-11-28 05:03:35,679 | INFO     | all data control threads have been joined
[2025-11-28 00:04:53] 2025-11-28 05:03:35,839 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 00:04:53] 2025-11-28 05:03:35,839 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 00:04:53] 2025-11-28 05:03:35,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:04:53] 2025-11-28 05:03:35,839 | INFO     | will abort loop
[2025-11-28 00:04:53] 2025-11-28 05:03:36,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:04:53] 2025-11-28 05:03:36,384 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:36,391 | INFO     | all payload control threads have been joined
[2025-11-28 00:04:53] 2025-11-28 05:03:36,680 | INFO     | [job] control thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:36,684 | INFO     | [data] control thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:36,735 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:36,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:04:53] 2025-11-28 05:03:36,845 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:36,893 | INFO     | [job] validate thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:37,397 | INFO     | [payload] control thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:37,430 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:37,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:37,484 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:37,515 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:04:53] 2025-11-28 05:03:37,568 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:37,779 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:37,874 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:38,186 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:38,521 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:03:40,812 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:04:53] 2025-11-28 05:04:05,730 | INFO     | PID=2714955 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 00:04:53] 2025-11-28 05:04:05,730 | INFO     | .. there are 71 such processes running
[2025-11-28 00:04:53] 2025-11-28 05:04:05,730 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:04:53] 2025-11-28 05:04:05,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:04:53] 2025-11-28 05:04:05,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:04:53] 2025-11-28 05:04:26,307 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:04:53] 2025-11-28 05:04:27,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663472133952)>', '<ExcThread(monitor, started 140662427072256)>']
[2025-11-28 00:04:53] 2025-11-28 05:04:27,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:04:53] 2025-11-28 05:04:27,862 | INFO     | [monitor] control thread has ended
[2025-11-28 00:04:53] 2025-11-28 05:04:32,357 | INFO     | all workflow threads have been joined
[2025-11-28 00:04:53] 2025-11-28 05:04:32,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:04:53] 2025-11-28 05:04:32,357 | INFO     | traces error code: 0
[2025-11-28 00:04:53] 2025-11-28 05:04:32,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:04:53] 2025-11-28 05:04:32,704 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:04:53] 2025-11-28 05:04:32,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:04:53] 2025-11-28 05:04:32,714 [wrapper] pilotpid: 2714955
[2025-11-28 00:04:53] 2025-11-28 05:04:32,718 [wrapper] Pilot exit status: 0
[2025-11-28 00:04:53] 2025-11-28 05:04:32,729 [wrapper] pandaids: 6898378232
[2025-11-28 00:04:53] 2025-11-28 05:04:32,930 [wrapper] cleanup supervisor_pilot 2029109 2714956
[2025-11-28 00:04:53] 2025-11-28 05:04:32,958 [wrapper] Test setup, not cleaning
[2025-11-28 00:04:53] 2025-11-28 05:04:32,972 [wrapper] apfmon messages muted
[2025-11-28 00:04:53] 2025-11-28 05:04:32,975 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:04:53] 2025-11-28 05:04:32,977 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:04:53]  *** Error codes and diagnostics ***
[2025-11-28 00:04:53]     "exeErrorCode": 0,
[2025-11-28 00:04:53]     "exeErrorDiag": "",
[2025-11-28 00:04:53]     "pilotErrorCode": 0,
[2025-11-28 00:04:53]     "pilotErrorDiag": "",
[2025-11-28 00:04:53]  *** Listing of results directory ***
[2025-11-28 00:04:53] total 1310772
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-28 00:04:53] -rwx------. 1 boincer umatlas     36292 Nov 26 11:38 runpilot2-wrapper.sh
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas       100 Nov 27 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:04:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 14:46 run_atlas
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas       105 Nov 27 14:46 job.xml
[2025-11-28 00:04:53] -rw-r--r--. 2 boincer umatlas 407611651 Nov 27 14:46 EVNT.47483658._002597.pool.root.1
[2025-11-28 00:04:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 14:46 start_atlas.sh
[2025-11-28 00:04:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 14:46 shared
[2025-11-28 00:04:53] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 14:46 input.tar.gz
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas         0 Nov 27 14:46 boinc_lockfile
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 14:46 pandaJob.out
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas        57 Nov 27 14:46 setup.sh.local
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas    991191 Nov 27 14:47 agis_schedconf.cvmfs.json
[2025-11-28 00:04:53] drwx------. 5 boincer umatlas      4096 Nov 27 14:47 pilot3
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas       533 Nov 27 23:49 boinc_task_state.xml
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas      7175 Nov 28 00:01 init_data.xml
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas 918860021 Nov 28 00:02 HITS.47556161._005795.pool.root.1
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas      1051 Nov 28 00:02 memory_monitor_summary.json
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas   1516240 Nov 28 00:03 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas   1778558 Nov 28 00:03 log.47556161._005795.job.log.tgz.1
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas        95 Nov 28 00:03 pilot_heartbeat.json
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas      8589 Nov 28 00:03 heartbeat.json
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas      5011 Nov 28 00:04 pilotlog.txt
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas   4140683 Nov 28 00:04 log.47556161._005795.job.log.1
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas       353 Nov 28 00:04 output.list
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas       620 Nov 28 00:04 runtime_log
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas   5939200 Nov 28 00:04 result.tar.gz
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas      9333 Nov 28 00:04 runtime_log.err
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas       657 Nov 28 00:04 GJMLDmliXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm89JKDm416Dtm.diag
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas        29 Nov 28 00:04 wrapper_checkpoint.txt
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 00:04 boinc_mmap_file
[2025-11-28 00:04:53] -rw-r--r--. 1 boincer umatlas     21317 Nov 28 00:04 stderr.txt
[2025-11-28 00:04:53] HITS file was successfully produced:
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas 918860021 Nov 28 00:02 shared/HITS.pool.root.1
[2025-11-28 00:04:53]  *** Contents of shared directory: ***
[2025-11-28 00:04:53] total 1301792
[2025-11-28 00:04:53] -rw-r--r--. 2 boincer umatlas 407611651 Nov 27 14:46 ATLAS.root_0
[2025-11-28 00:04:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 14:46 start_atlas.sh
[2025-11-28 00:04:53] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 14:46 input.tar.gz
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas 918860021 Nov 28 00:02 HITS.pool.root.1
[2025-11-28 00:04:53] -rw-------. 1 boincer umatlas   5939200 Nov 28 00:04 result.tar.gz
00:04:55 (2706738): run_atlas exited; CPU time 140172.388813
00:04:55 (2706738): called boinc_finish(0)

</stderr_txt>
]]>

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