Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:34:33 (1459548): wrapper (7.7.26015): starting
11:34:33 (1459548): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 11:34:33] Arguments: --nthreads 12
[2025-11-27 11:34:33] Threads: 12
[2025-11-27 11:34:33] Checking for CVMFS
[2025-11-27 11:34:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:34:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:34:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:34:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:34:37] 2.11.5.0 4091557 29965 187908 153383 1 93 36084246 45568000 33043 130560 0 223984878 99.755 155164149 21767 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-27 11:34:37] CVMFS is ok
[2025-11-27 11:34:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:34:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:34:37] Further information can be found at the LHC@home message board.
[2025-11-27 11:34:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:34:37] Checking for apptainer binary...
[2025-11-27 11:34:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:34:37] Running /usr/bin/apptainer --version
[2025-11-27 11:34:37] apptainer version 1.4.1-1.el9
[2025-11-27 11:34:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:34:39] wns0073.triumf.lcg
[2025-11-27 11:34:39] apptainer works
[2025-11-27 11:34:39] Set ATHENA_PROC_NUMBER=12
[2025-11-27 11:34:39] Set ATHENA_CORE_NUMBER=12
[2025-11-27 11:34:39] Starting ATLAS job with PandaID=6898687473
[2025-11-27 11:34:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:49:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:49:09] 2025-11-27 19:48:14,887 | INFO     | ..............................
[2025-11-27 11:49:09] 2025-11-27 19:48:14,887 | INFO     | . Timing measurements:
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . get job = 0 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . initial setup = 9 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . payload setup = 49 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . stage-in = 1 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . payload execution = 431 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . stage-out = 1 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . log creation = 0 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | ..............................
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 11:49:09] 2025-11-27 19:48:14,889 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898687473/pilotlog.txt
[2025-11-27 11:49:09] 2025-11-27 19:48:14,928 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-27 11:49:09] - Log from pilotlog.txt -
[2025-11-27 11:49:09] 2025-11-27 19:48:14,874 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898687473/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:49:09] 2025-11-27 19:48:14,878 | INFO     | extracted standard info from prmon json
[2025-11-27 11:49:09] 2025-11-27 19:48:14,878 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:49:09] 2025-11-27 19:48:14,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:49:09] 2025-11-27 19:48:14,879 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 11:49:09] 2025-11-27 19:48:14,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 11:49:09] 2025-11-27 19:48:14,880 | WARNING  | wrong length of table data, x=[1764272354.0, 1764272415.0, 1764272476.0, 1764272537.0, 1764272598.0, 1764272659.0, 1764272720.0], y=[2701.0, 12548.0, 227201.0, 346
[2025-11-27 11:49:09] 2025-11-27 19:48:14,887 | INFO     | could have reported an average CPU frequency of 1480 MHz (4 samples)
[2025-11-27 11:49:09] 2025-11-27 19:48:14,887 | INFO     | ..............................
[2025-11-27 11:49:09] 2025-11-27 19:48:14,887 | INFO     | . Timing measurements:
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . get job = 0 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . initial setup = 9 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . payload setup = 49 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . stage-in = 1 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . payload execution = 431 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . stage-out = 1 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . log creation = 0 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | ..............................
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 11:49:09] 2025-11-27 19:48:14,889 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898687473/pilotlog.txt
[2025-11-27 11:49:09] 2025-11-27 19:48:14,928 | WARNING  | 
[2025-11-27 11:49:09] [begin log extracts]
[2025-11-27 11:49:09] - Log from pilotlog.txt -
[2025-11-27 11:49:09] 2025-11-27 19:48:14,874 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898687473/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:49:09] 2025-11-27 19:48:14,878 | INFO     | extracted standard info from prmon json
[2025-11-27 11:49:09] 2025-11-27 19:48:14,878 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:49:09] 2025-11-27 19:48:14,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:49:09] 2025-11-27 19:48:14,879 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 11:49:09] 2025-11-27 19:48:14,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 11:49:09] 2025-11-27 19:48:14,880 | WARNING  | wrong length of table data, x=[1764272354.0, 1764272415.0, 1764272476.0, 1764272537.0, 1764272598.0, 1764272659.0, 1764272720.0], y=[2701.0, 12548.0, 227201.0, 346
[2025-11-27 11:49:09] 2025-11-27 19:48:14,887 | INFO     | could have reported an average CPU frequency of 1480 MHz (4 samples)
[2025-11-27 11:49:09] 2025-11-27 19:48:14,887 | INFO     | ..............................
[2025-11-27 11:49:09] 2025-11-27 19:48:14,887 | INFO     | . Timing measurements:
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . get job = 0 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . initial setup = 9 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . payload setup = 49 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . stage-in = 1 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . payload execution = 431 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . stage-out = 1 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | . log creation = 0 s
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | ..............................
[2025-11-27 11:49:09] 2025-11-27 19:48:14,888 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 11:49:09] 2025-11-27 19:48:14,889 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898687473/pilotlog.txt
[2025-11-27 11:49:09] [end log extracts]
[2025-11-27 11:49:09] 2025-11-27 19:48:14,929 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-27 11:49:09] 2025-11-27 19:48:14,930 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-27 11:49:09] 2025-11-27 19:48:15,271 | INFO     | 
[2025-11-27 11:49:09] 2025-11-27 19:48:15,271 | INFO     | job summary report
[2025-11-27 11:49:09] 2025-11-27 19:48:15,271 | INFO     | --------------------------------------------------
[2025-11-27 11:49:09] 2025-11-27 19:48:15,271 | INFO     | PanDA job id: 6898687473
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | task id: 47556161
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-27 11:45:28,293 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | pilot state: failed 
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | transexitcode: 65
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | exeerrorcode: 65
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | exitcode: 65
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | cpuconsumptiontime: 75 s
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | nevents: 0
[2025-11-27 11:49:09] 2025-11-27 19:48:15,272 | INFO     | neventsw: 0
[2025-11-27 11:49:09] 2025-11-27 19:48:15,273 | INFO     | pid: 1480010
[2025-11-27 11:49:09] 2025-11-27 19:48:15,273 | INFO     | pgrp: 1480010
[2025-11-27 11:49:09] 2025-11-27 19:48:15,273 | INFO     | corecount: 12
[2025-11-27 11:49:09] 2025-11-27 19:48:15,273 | INFO     | event service: False
[2025-11-27 11:49:09] 2025-11-27 19:48:15,273 | INFO     | sizes: {0: 2283482, 1: 2284080, 2: 2284249, 4: 2284391, 5: 2284391, 16: 2284447, 28: 2284603, 39: 2284631, 49: 2284921, 51: 2284949, 482: 2310511, 483: 2310795, 48
[2025-11-27 11:49:09] 2025-11-27 19:48:15,273 | INFO     | --------------------------------------------------
[2025-11-27 11:49:09] 2025-11-27 19:48:15,273 | INFO     | 
[2025-11-27 11:49:09] 2025-11-27 19:48:15,273 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-27 11:49:09] 2025-11-27 19:48:15,383 | INFO     | time since job start (735s) is within the limit (172800.0s)
[2025-11-27 11:49:09] 2025-11-27 19:48:15,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,677 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:49:09] 2025-11-27 19:48:15,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:49:09] 2025-11-27 19:48:15,693 | INFO     | job 6898687473 has completed (purged errors)
[2025-11-27 11:49:09] 2025-11-27 19:48:15,693 | INFO     | overall cleanup function is called
[2025-11-27 11:49:09] 2025-11-27 19:48:16,702 | INFO     | --- collectZombieJob: --- 10, [1480010]
[2025-11-27 11:49:09] 2025-11-27 19:48:16,702 | INFO     | zombie collector waiting for pid 1480010
[2025-11-27 11:49:09] 2025-11-27 19:48:16,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:49:09] 2025-11-27 19:48:16,702 | INFO     | collected zombie processes
[2025-11-27 11:49:09] 2025-11-27 19:48:16,703 | INFO     | will attempt to kill all subprocesses of pid=1480010
[2025-11-27 11:49:09] 2025-11-27 19:48:18,330 | INFO     | process IDs to be killed: [1480010] (in reverse order)
[2025-11-27 11:49:09] 2025-11-27 19:48:19,188 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:49:09] 2025-11-27 19:48:19,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:49:09] 2025-11-27 19:48:19,220 | INFO     | did not find any defunct processes belonging to 1480010
[2025-11-27 11:49:09] 2025-11-27 19:48:19,260 | INFO     | did not find any defunct processes belonging to 1480010
[2025-11-27 11:49:09] 2025-11-27 19:48:19,263 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:49:09] 2025-11-27 19:48:19,263 | INFO     | ready for new job
[2025-11-27 11:49:09] 2025-11-27 19:48:19,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:49:09] 2025-11-27 19:48:19,265 | INFO     | ***************************************
[2025-11-27 11:49:09] 2025-11-27 19:48:19,265 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:49:09] 2025-11-27 19:48:19,266 | INFO     | ***************************************
[2025-11-27 11:49:09] 2025-11-27 19:48:19,266 | INFO     | 
[2025-11-27 11:49:09] 2025-11-27 19:48:19,269 | INFO     | architecture information:
[2025-11-27 11:49:09] 2025-11-27 19:48:19,283 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:49:09] 2025-11-27 19:48:19,372 | INFO     | cat /etc/os-release:
[2025-11-27 11:49:09] NAME="CentOS Linux"
[2025-11-27 11:49:09] VERSION="7 (Core)"
[2025-11-27 11:49:09] ID="centos"
[2025-11-27 11:49:09] ID_LIKE="rhel fedora"
[2025-11-27 11:49:09] VERSION_ID="7"
[2025-11-27 11:49:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:49:09] ANSI_COLOR="0;31"
[2025-11-27 11:49:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:49:09] HOME_URL="https://www.centos.org/"
[2025-11-27 11:49:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:49:09] 
[2025-11-27 11:49:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:49:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:49:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:49:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:49:09] 
[2025-11-27 11:49:09] 2025-11-27 19:48:19,373 | INFO     | ***************************************
[2025-11-27 11:49:09] 2025-11-27 19:48:19,876 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-27 11:49:09] 2025-11-27 19:48:19,974 | INFO     | sufficient remaining disk space (1102582906880 B)
[2025-11-27 11:49:09] 2025-11-27 19:48:19,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:49:09] 2025-11-27 19:48:19,975 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:49:09] 2025-11-27 19:48:19,975 | INFO     | update_server=False
[2025-11-27 11:49:09] 2025-11-27 19:48:19,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:49:09] 2025-11-27 19:48:19,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:49:09] 2025-11-27 19:48:20,128 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 11:49:09] 2025-11-27 19:48:20,128 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 11:49:09] 2025-11-27 19:48:20,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:49:09] 2025-11-27 19:48:20,128 | INFO     | will abort loop
[2025-11-27 11:49:09] 2025-11-27 19:48:20,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:49:09] 2025-11-27 19:48:20,679 | INFO     | all payload control threads have been joined
[2025-11-27 11:49:09] 2025-11-27 19:48:20,699 | INFO     | all data control threads have been joined
[2025-11-27 11:49:09] 2025-11-27 19:48:20,905 | INFO     | all job control threads have been joined
[2025-11-27 11:49:09] 2025-11-27 19:48:20,981 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,134 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,246 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,291 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,323 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,600 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,684 | INFO     | [payload] control thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,705 | INFO     | [data] control thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,911 | INFO     | [job] control thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:21,987 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:22,122 | INFO     | [job] validate thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:22,167 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:22,169 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:22,442 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:22,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:22,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:49:09] 2025-11-27 19:48:26,776 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:49:09] 2025-11-27 19:48:50,340 | INFO     | PID=1465036 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:49:09] 2025-11-27 19:48:50,341 | INFO     | .. there are 42 such processes running
[2025-11-27 11:49:09] 2025-11-27 19:48:50,341 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:49:09] 2025-11-27 19:48:50,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:49:09] 2025-11-27 19:48:50,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:49:09] 2025-11-27 19:49:00,723 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:49:09] 2025-11-27 19:49:02,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140149924411200)>', '<ExcThread(monitor, started 140148926830336)>']
[2025-11-27 11:49:09] 2025-11-27 19:49:02,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:49:09] 2025-11-27 19:49:02,417 | INFO     | [monitor] control thread has ended
[2025-11-27 11:49:09] 2025-11-27 19:49:07,264 | INFO     | all workflow threads have been joined
[2025-11-27 11:49:09] 2025-11-27 19:49:07,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:49:09] 2025-11-27 19:49:07,265 | INFO     | traces error code: 0
[2025-11-27 11:49:09] 2025-11-27 19:49:07,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:49:09] 2025-11-27 19:49:07,777 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:49:09] 2025-11-27 19:49:07,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:49:09] 2025-11-27 19:49:07,832 [wrapper] pilotpid: 1465036
[2025-11-27 11:49:09] 2025-11-27 19:49:07,857 [wrapper] Pilot exit status: 0
[2025-11-27 11:49:09] 2025-11-27 19:49:08,012 [wrapper] pandaids: 6898687473
[2025-11-27 11:49:09] 2025-11-27 19:49:08,270 [wrapper] cleanup supervisor_pilot 1465042 1465037
[2025-11-27 11:49:09] 2025-11-27 19:49:08,293 [wrapper] Test setup, not cleaning
[2025-11-27 11:49:09] 2025-11-27 19:49:08,315 [wrapper] apfmon messages muted
[2025-11-27 11:49:09] 2025-11-27 19:49:08,348 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:49:09] 2025-11-27 19:49:08,368 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:49:09]  *** Error codes and diagnostics ***
[2025-11-27 11:49:09]     "exeErrorCode": 65,
[2025-11-27 11:49:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-27 11:49:09]     "pilotErrorCode": 1305,
[2025-11-27 11:49:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-27 11:49:09]  *** Listing of results directory ***
[2025-11-27 11:49:09] total 405864
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc    598293 Nov  6 00:41 pilot3.tar.gz
[2025-11-27 11:49:09] -rwx------. 1 boinc boinc     36292 Nov 26 08:36 runpilot2-wrapper.sh
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc      5112 Nov 26 08:37 queuedata.json
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc       100 Nov 27 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:49:09] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 11:34 run_atlas
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc       105 Nov 27 11:34 job.xml
[2025-11-27 11:49:09] -rw-r--r--. 2 boinc boinc 411238449 Nov 27 11:34 EVNT.47483658._002674.pool.root.1
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc      6595 Nov 27 11:34 init_data.xml
[2025-11-27 11:49:09] -rw-r--r--. 2 boinc boinc     15847 Nov 27 11:34 start_atlas.sh
[2025-11-27 11:49:09] drwxrwx--x. 2 boinc boinc      4096 Nov 27 11:34 shared
[2025-11-27 11:49:09] -rw-r--r--. 2 boinc boinc    611289 Nov 27 11:34 input.tar.gz
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc         0 Nov 27 11:34 boinc_lockfile
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc      2784 Nov 27 11:34 pandaJob.out
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc    991191 Nov 27 11:35 agis_schedconf.cvmfs.json
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc   1516240 Nov 27 11:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:49:09] drwx------. 7 boinc boinc      4096 Nov 27 11:36 pilot3
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc      1002 Nov 27 11:45 memory_monitor_summary.json
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc     53745 Nov 27 11:45 log.47556161._006561.job.log.tgz.1
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc       525 Nov 27 11:45 boinc_task_state.xml
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc        95 Nov 27 11:48 pilot_heartbeat.json
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc     10332 Nov 27 11:48 heartbeat.json
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc      8192 Nov 27 11:48 boinc_mmap_file
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc        23 Nov 27 11:48 wrapper_checkpoint.txt
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc      5009 Nov 27 11:49 pilotlog.txt
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc    151061 Nov 27 11:49 log.47556161._006561.job.log.1
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc       186 Nov 27 11:49 output.list
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc       620 Nov 27 11:49 runtime_log
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc    225280 Nov 27 11:49 result.tar.gz
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc       648 Nov 27 11:49 xIVMDmFgXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxENKDmYmF8xn.diag
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc      8636 Nov 27 11:49 runtime_log.err
[2025-11-27 11:49:09] -rw-r--r--. 1 boinc boinc     22596 Nov 27 11:49 stderr.txt
[2025-11-27 11:49:09] No HITS result produced
[2025-11-27 11:49:09]  *** Contents of shared directory: ***
[2025-11-27 11:49:09] total 402444
[2025-11-27 11:49:09] -rw-r--r--. 2 boinc boinc 411238449 Nov 27 11:34 ATLAS.root_0
[2025-11-27 11:49:09] -rw-r--r--. 2 boinc boinc     15847 Nov 27 11:34 start_atlas.sh
[2025-11-27 11:49:09] -rw-r--r--. 2 boinc boinc    611289 Nov 27 11:34 input.tar.gz
[2025-11-27 11:49:09] -rw-------. 1 boinc boinc    225280 Nov 27 11:49 result.tar.gz
11:49:10 (1459548): run_atlas exited; CPU time 100.689009
11:49:10 (1459548): called boinc_finish(0)

</stderr_txt>
]]>

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