Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:25:32 (1306276): wrapper (7.7.26015): starting
11:25:32 (1306276): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 11:25:32] Arguments: --nthreads 12
[2025-11-27 11:25:32] Threads: 12
[2025-11-27 11:25:32] Checking for CVMFS
[2025-11-27 11:25:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:25:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:25:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:25:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:25:33] 2.11.5.0 1836869 29913 214632 153382 2 93 40119453 45568000 13538 130560 0 265811682 99.794 161357735 28447 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-27 11:25:33] CVMFS is ok
[2025-11-27 11:25:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:25:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:25:33] Further information can be found at the LHC@home message board.
[2025-11-27 11:25:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:25:33] Checking for apptainer binary...
[2025-11-27 11:25:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:25:33] Running /usr/bin/apptainer --version
[2025-11-27 11:25:33] apptainer version 1.4.1-1.el9
[2025-11-27 11:25:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:25:33] wns0078.triumf.lcg
[2025-11-27 11:25:33] apptainer works
[2025-11-27 11:25:33] Set ATHENA_PROC_NUMBER=12
[2025-11-27 11:25:33] Set ATHENA_CORE_NUMBER=12
[2025-11-27 11:25:33] Starting ATLAS job with PandaID=6898378133
[2025-11-27 11:25:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:32:13]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:32:13] 2025-11-27 19:31:29,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 11:32:13] 2025-11-27 19:31:29,045 | WARNING  | wrong length of table data, x=[1764271657.0, 1764271718.0], y=[1495.0, 633999.0] (must be same and length>=4)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | could have reported an average CPU frequency of 2663 MHz (4 samples)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | ..............................
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . Timing measurements:
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . get job = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . initial setup = 4 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . payload setup = 24 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . stage-in = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . payload execution = 131 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . stage-out = 1 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . log creation = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | ..............................
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898378133/pilotlog.txt
[2025-11-27 11:32:13] 2025-11-27 19:31:29,082 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-27 11:32:13] - Log from pilotlog.txt -
[2025-11-27 11:32:13] 2025-11-27 19:31:29,041 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898378133/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,042 | INFO     | extracted standard info from prmon json
[2025-11-27 11:32:13] 2025-11-27 19:31:29,044 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:32:13] 2025-11-27 19:31:29,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:32:13] 2025-11-27 19:31:29,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 11:32:13] 2025-11-27 19:31:29,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 11:32:13] 2025-11-27 19:31:29,045 | WARNING  | wrong length of table data, x=[1764271657.0, 1764271718.0], y=[1495.0, 633999.0] (must be same and length>=4)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | could have reported an average CPU frequency of 2663 MHz (4 samples)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | ..............................
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . Timing measurements:
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . get job = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . initial setup = 4 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . payload setup = 24 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . stage-in = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . payload execution = 131 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . stage-out = 1 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . log creation = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | ..............................
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898378133/pilotlog.txt
[2025-11-27 11:32:13] 2025-11-27 19:31:29,083 | WARNING  | 
[2025-11-27 11:32:13] [begin log extracts]
[2025-11-27 11:32:13] - Log from pilotlog.txt -
[2025-11-27 11:32:13] 2025-11-27 19:31:29,041 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898378133/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,042 | INFO     | extracted standard info from prmon json
[2025-11-27 11:32:13] 2025-11-27 19:31:29,044 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:32:13] 2025-11-27 19:31:29,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:32:13] 2025-11-27 19:31:29,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 11:32:13] 2025-11-27 19:31:29,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 11:32:13] 2025-11-27 19:31:29,045 | WARNING  | wrong length of table data, x=[1764271657.0, 1764271718.0], y=[1495.0, 633999.0] (must be same and length>=4)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | could have reported an average CPU frequency of 2663 MHz (4 samples)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | ..............................
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . Timing measurements:
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . get job = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . initial setup = 4 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . payload setup = 24 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . stage-in = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . payload execution = 131 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . stage-out = 1 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | . log creation = 0 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | ..............................
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 11:32:13] 2025-11-27 19:31:29,046 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898378133/pilotlog.txt
[2025-11-27 11:32:13] [end log extracts]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,083 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,084 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-27 11:32:13] 2025-11-27 19:31:29,690 | INFO     | 
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | job summary report
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | --------------------------------------------------
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | PanDA job id: 6898378133
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | task id: 47556161
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-27 11:29:07,291 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | pilot state: failed 
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | transexitcode: 65
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | exeerrorcode: 65
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | exitcode: 65
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | cpuconsumptiontime: 42 s
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | nevents: 0
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | neventsw: 0
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | pid: 1319118
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | pgrp: 1319118
[2025-11-27 11:32:13] 2025-11-27 19:31:29,691 | INFO     | corecount: 12
[2025-11-27 11:32:13] 2025-11-27 19:31:29,692 | INFO     | event service: False
[2025-11-27 11:32:13] 2025-11-27 19:31:29,692 | INFO     | sizes: {0: 2283488, 1: 2284341, 2: 2284369, 13: 2284369, 19: 2284687, 23: 2284715, 158: 2310320, 159: 2310296, 160: 2314614, 163: 2314642, 291: 2314808}
[2025-11-27 11:32:13] 2025-11-27 19:31:29,692 | INFO     | --------------------------------------------------
[2025-11-27 11:32:13] 2025-11-27 19:31:29,692 | INFO     | 
[2025-11-27 11:32:13] 2025-11-27 19:31:29,692 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | job 6898378133 has completed (purged errors)
[2025-11-27 11:32:13] 2025-11-27 19:31:29,753 | INFO     | overall cleanup function is called
[2025-11-27 11:32:13] 2025-11-27 19:31:30,760 | INFO     | --- collectZombieJob: --- 10, [1319118]
[2025-11-27 11:32:13] 2025-11-27 19:31:30,761 | INFO     | zombie collector waiting for pid 1319118
[2025-11-27 11:32:13] 2025-11-27 19:31:30,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:32:13] 2025-11-27 19:31:30,761 | INFO     | collected zombie processes
[2025-11-27 11:32:13] 2025-11-27 19:31:30,761 | INFO     | will attempt to kill all subprocesses of pid=1319118
[2025-11-27 11:32:13] 2025-11-27 19:31:31,250 | INFO     | process IDs to be killed: [1319118] (in reverse order)
[2025-11-27 11:32:13] 2025-11-27 19:31:31,379 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:32:13] 2025-11-27 19:31:31,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:32:13] 2025-11-27 19:31:31,387 | INFO     | did not find any defunct processes belonging to 1319118
[2025-11-27 11:32:13] 2025-11-27 19:31:31,394 | INFO     | did not find any defunct processes belonging to 1319118
[2025-11-27 11:32:13] 2025-11-27 19:31:31,395 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:32:13] 2025-11-27 19:31:31,395 | INFO     | ready for new job
[2025-11-27 11:32:13] 2025-11-27 19:31:31,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:32:13] 2025-11-27 19:31:31,396 | INFO     | ***************************************
[2025-11-27 11:32:13] 2025-11-27 19:31:31,396 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:32:13] 2025-11-27 19:31:31,396 | INFO     | ***************************************
[2025-11-27 11:32:13] 2025-11-27 19:31:31,396 | INFO     | 
[2025-11-27 11:32:13] 2025-11-27 19:31:31,398 | INFO     | architecture information:
[2025-11-27 11:32:13] 2025-11-27 19:31:31,398 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:32:13] 2025-11-27 19:31:31,417 | INFO     | cat /etc/os-release:
[2025-11-27 11:32:13] NAME="CentOS Linux"
[2025-11-27 11:32:13] VERSION="7 (Core)"
[2025-11-27 11:32:13] ID="centos"
[2025-11-27 11:32:13] ID_LIKE="rhel fedora"
[2025-11-27 11:32:13] VERSION_ID="7"
[2025-11-27 11:32:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:32:13] ANSI_COLOR="0;31"
[2025-11-27 11:32:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:32:13] HOME_URL="https://www.centos.org/"
[2025-11-27 11:32:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:32:13] 
[2025-11-27 11:32:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:32:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:32:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:32:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:32:13] 
[2025-11-27 11:32:13] 2025-11-27 19:31:31,417 | INFO     | ***************************************
[2025-11-27 11:32:13] 2025-11-27 19:31:31,921 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-27 11:32:13] 2025-11-27 19:31:31,945 | INFO     | sufficient remaining disk space (2104476303360 B)
[2025-11-27 11:32:13] 2025-11-27 19:31:31,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:32:13] 2025-11-27 19:31:31,945 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:32:13] 2025-11-27 19:31:31,945 | INFO     | update_server=False
[2025-11-27 11:32:13] 2025-11-27 19:31:31,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:32:13] 2025-11-27 19:31:31,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:32:13] 2025-11-27 19:31:32,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:32:13] 2025-11-27 19:31:32,044 | INFO     | aborting loop
[2025-11-27 11:32:13] 2025-11-27 19:31:32,648 | INFO     | all payload control threads have been joined
[2025-11-27 11:32:13] 2025-11-27 19:31:32,665 | INFO     | all data control threads have been joined
[2025-11-27 11:32:13] 2025-11-27 19:31:32,951 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,017 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,049 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,330 | INFO     | all job control threads have been joined
[2025-11-27 11:32:13] 2025-11-27 19:31:33,451 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,627 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,646 | INFO     | [job] validate thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,656 | INFO     | [payload] control thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:32:13] 2025-11-27 19:31:33,672 | INFO     | [data] control thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,743 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:33,952 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:34,239 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:34,295 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:34,336 | INFO     | [job] control thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:34,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:32:13] 2025-11-27 19:31:35,440 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:31:37,670 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:32:13] 2025-11-27 19:32:01,625 | INFO     | PID=1309974 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:32:13] 2025-11-27 19:32:01,625 | INFO     | .. there are 28 such processes running
[2025-11-27 11:32:13] 2025-11-27 19:32:01,625 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:32:13] 2025-11-27 19:32:01,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:32:13] 2025-11-27 19:32:01,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:32:13] 2025-11-27 19:32:04,955 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:32:13] 2025-11-27 19:32:05,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886099703616)>', '<ExcThread(monitor, started 139885155424000)>']
[2025-11-27 11:32:13] 2025-11-27 19:32:06,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:32:13] 2025-11-27 19:32:06,659 | INFO     | [monitor] control thread has ended
[2025-11-27 11:32:13] 2025-11-27 19:32:10,955 | INFO     | all workflow threads have been joined
[2025-11-27 11:32:13] 2025-11-27 19:32:10,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:32:13] 2025-11-27 19:32:10,956 | INFO     | traces error code: 0
[2025-11-27 11:32:13] 2025-11-27 19:32:10,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:32:13] 2025-11-27 19:32:11,563 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:32:13] 2025-11-27 19:32:11,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:32:13] 2025-11-27 19:32:11,573 [wrapper] pilotpid: 1309974
[2025-11-27 11:32:13] 2025-11-27 19:32:11,584 [wrapper] Pilot exit status: 0
[2025-11-27 11:32:13] 2025-11-27 19:32:11,671 [wrapper] pandaids: 6898378133
[2025-11-27 11:32:13] 2025-11-27 19:32:11,866 [wrapper] cleanup supervisor_pilot 1309980 1309975
[2025-11-27 11:32:13] 2025-11-27 19:32:11,882 [wrapper] Test setup, not cleaning
[2025-11-27 11:32:13] 2025-11-27 19:32:11,937 [wrapper] apfmon messages muted
[2025-11-27 11:32:13] 2025-11-27 19:32:11,965 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:32:13] 2025-11-27 19:32:12,000 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:32:13]  *** Error codes and diagnostics ***
[2025-11-27 11:32:13]     "exeErrorCode": 65,
[2025-11-27 11:32:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-27 11:32:13]     "pilotErrorCode": 1305,
[2025-11-27 11:32:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-27 11:32:13]  *** Listing of results directory ***
[2025-11-27 11:32:13] total 403908
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc    576529 Nov 26 08:12 pilot3.tar.gz
[2025-11-27 11:32:13] -rwx------. 1 boinc boinc     36292 Nov 26 08:38 runpilot2-wrapper.sh
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc      5112 Nov 26 08:41 queuedata.json
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc       100 Nov 27 11:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:32:13] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 11:25 run_atlas
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc       105 Nov 27 11:25 job.xml
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc      6595 Nov 27 11:25 init_data.xml
[2025-11-27 11:32:13] -rw-r--r--. 2 boinc boinc 409379060 Nov 27 11:25 EVNT.47483658._002589.pool.root.1
[2025-11-27 11:32:13] -rw-r--r--. 2 boinc boinc     15847 Nov 27 11:25 start_atlas.sh
[2025-11-27 11:32:13] drwxrwx--x. 2 boinc boinc      4096 Nov 27 11:25 shared
[2025-11-27 11:32:13] -rw-r--r--. 2 boinc boinc    590108 Nov 27 11:25 input.tar.gz
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc         0 Nov 27 11:25 boinc_lockfile
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc      2787 Nov 27 11:25 pandaJob.out
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc    991191 Nov 27 11:26 agis_schedconf.cvmfs.json
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc   1516240 Nov 27 11:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:32:13] drwx------. 5 boinc boinc      4096 Nov 27 11:26 pilot3
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc       524 Nov 27 11:29 boinc_task_state.xml
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc      1012 Nov 27 11:29 memory_monitor_summary.json
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc     49145 Nov 27 11:29 log.47556161._005716.job.log.tgz.1
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc        95 Nov 27 11:31 pilot_heartbeat.json
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc     10340 Nov 27 11:31 heartbeat.json
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc      4823 Nov 27 11:32 pilotlog.txt
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc    107365 Nov 27 11:32 log.47556161._005716.job.log.1
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc       186 Nov 27 11:32 output.list
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc       620 Nov 27 11:32 runtime_log
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc    174080 Nov 27 11:32 result.tar.gz
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc        23 Nov 27 11:32 wrapper_checkpoint.txt
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc      8636 Nov 27 11:32 runtime_log.err
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc       647 Nov 27 11:32 1uRLDmliXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5HNKDm5jAqum.diag
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc      8192 Nov 27 11:32 boinc_mmap_file
[2025-11-27 11:32:13] -rw-r--r--. 1 boinc boinc     22526 Nov 27 11:32 stderr.txt
[2025-11-27 11:32:13] No HITS result produced
[2025-11-27 11:32:13]  *** Contents of shared directory: ***
[2025-11-27 11:32:13] total 400560
[2025-11-27 11:32:13] -rw-r--r--. 2 boinc boinc 409379060 Nov 27 11:25 ATLAS.root_0
[2025-11-27 11:32:13] -rw-r--r--. 2 boinc boinc     15847 Nov 27 11:25 start_atlas.sh
[2025-11-27 11:32:13] -rw-r--r--. 2 boinc boinc    590108 Nov 27 11:25 input.tar.gz
[2025-11-27 11:32:13] -rw-------. 1 boinc boinc    174080 Nov 27 11:32 result.tar.gz
11:32:14 (1306276): run_atlas exited; CPU time 48.384269
11:32:14 (1306276): called boinc_finish(0)

</stderr_txt>
]]>

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