Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:09:31 (511374): wrapper (7.7.26015): starting
09:09:31 (511374): wrapper: running run_atlas (--nthreads 4)
[2025-11-30 09:09:31] Arguments: --nthreads 4
[2025-11-30 09:09:31] Threads: 4
[2025-11-30 09:09:31] Checking for CVMFS
[2025-11-30 09:09:31] No cvmfs_config command found, will try listing directly
[2025-11-30 09:09:31] CVMFS is ok
[2025-11-30 09:09:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 09:09:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 09:09:31] Further information can be found at the LHC@home message board.
[2025-11-30 09:09:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 09:09:31] Checking for apptainer binary...
[2025-11-30 09:09:31] which: no apptainer in ((null))
[2025-11-30 09:09:31] apptainer is not installed, using version from CVMFS
[2025-11-30 09:09:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 09:09:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-11-30 09:09:32] apptainer works
[2025-11-30 09:09:32] Set ATHENA_PROC_NUMBER=4
[2025-11-30 09:09:32] Set ATHENA_CORE_NUMBER=4
[2025-11-30 09:09:32] Starting ATLAS job with PandaID=6898686602
[2025-11-30 09:09:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 03:22:19]  *** The last 200 lines of the pilot log: ***
[2025-12-01 03:22:19] 2025-12-01 02:02:18,368 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-01 03:22:19] 2025-12-01 02:02:18,378 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2726.5588124999995
[2025-12-01 03:22:19] 2025-12-01 02:02:18,390 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6898686602/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 03:22:19] 2025-12-01 02:02:18,391 | INFO     | extracted standard info from prmon json
[2025-12-01 03:22:19] 2025-12-01 02:02:18,391 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 03:22:19] 2025-12-01 02:02:18,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 03:22:19] 2025-12-01 02:02:18,409 | INFO     | fitting pss+swap vs Time
[2025-12-01 03:22:19] 2025-12-01 02:02:18,410 | INFO     | sum of square deviations: 364109853991.9809
[2025-12-01 03:22:19] 2025-12-01 02:02:18,432 | INFO     | sum of deviations: 1070975934485.0797
[2025-12-01 03:22:19] 2025-12-01 02:02:18,432 | INFO     | mean x: 1764522360.1232228
[2025-12-01 03:22:19] 2025-12-01 02:02:18,432 | INFO     | mean y: 2283592.5763033177
[2025-12-01 03:22:19] 2025-12-01 02:02:18,432 | INFO     | intersect: -5187801110.801174
[2025-12-01 03:22:19] 2025-12-01 02:02:18,433 | INFO     | chi2: 4.337765622610581
[2025-12-01 03:22:19] 2025-12-01 02:02:18,435 | INFO     | sum of square deviations: 358957434244.40485
[2025-12-01 03:22:19] 2025-12-01 02:02:18,455 | INFO     | sum of deviations: 1303706575006.4944
[2025-12-01 03:22:19] 2025-12-01 02:02:18,456 | INFO     | mean x: 1764522207.6238096
[2025-12-01 03:22:19] 2025-12-01 02:02:18,456 | INFO     | mean y: 2290476.1961904764
[2025-12-01 03:22:19] 2025-12-01 02:02:18,456 | INFO     | intersect: -6406322312.856227
[2025-12-01 03:22:19] 2025-12-01 02:02:18,457 | INFO     | chi2: 1.9520503903895274
[2025-12-01 03:22:19] 2025-12-01 02:02:18,457 | INFO     | current chi2=1.9520503903895274 (change=54.99871223529287 %)
[2025-12-01 03:22:19] 2025-12-01 02:02:18,459 | INFO     | sum of square deviations: 353853852621.8279
[2025-12-01 03:22:19] 2025-12-01 02:02:18,479 | INFO     | sum of deviations: 1332280301448.9985
[2025-12-01 03:22:19] 2025-12-01 02:02:18,479 | INFO     | mean x: 1764522055.1244018
[2025-12-01 03:22:19] 2025-12-01 02:02:18,479 | INFO     | mean y: 2291327.4
[2025-12-01 03:22:19] 2025-12-01 02:02:18,479 | INFO     | intersect: -6641236666.138455
[2025-12-01 03:22:19] 2025-12-01 02:02:18,481 | INFO     | chi2: 1.841528359879977
[2025-12-01 03:22:19] 2025-12-01 02:02:18,481 | INFO     | current chi2=1.841528359879977 (change=5.661843108850075 %)
[2025-12-01 03:22:19] 2025-12-01 02:02:18,481 | INFO     | right removable region: 1044
[2025-12-01 03:22:19] 2025-12-01 02:02:18,482 | INFO     | sum of square deviations: 358957354944.4049
[2025-12-01 03:22:19] 2025-12-01 02:02:18,486 | INFO     | time since job start (64355s) is within the limit (172800.0s)
[2025-12-01 03:22:19] 2025-12-01 02:02:18,504 | INFO     | sum of deviations: 882887330539.41
[2025-12-01 03:22:19] 2025-12-01 02:02:18,504 | INFO     | mean x: 1764522512.6238096
[2025-12-01 03:22:19] 2025-12-01 02:02:18,504 | INFO     | mean y: 2289150.5276190476
[2025-12-01 03:22:19] 2025-12-01 02:02:18,504 | INFO     | intersect: -4337709875.508245
[2025-12-01 03:22:19] 2025-12-01 02:02:18,505 | INFO     | chi2: 2.6021501912644665
[2025-12-01 03:22:19] 2025-12-01 02:02:18,506 | INFO     | current chi2=2.6021501912644665 (change=40.01173835440135 %)
[2025-12-01 03:22:19] 2025-12-01 02:02:18,507 | INFO     | sum of square deviations: 353853821876.323
[2025-12-01 03:22:19] 2025-12-01 02:02:18,527 | INFO     | sum of deviations: 848385542725.7761
[2025-12-01 03:22:19] 2025-12-01 02:02:18,528 | INFO     | mean x: 1764522665.122488
[2025-12-01 03:22:19] 2025-12-01 02:02:18,528 | INFO     | mean y: 2290182.009569378
[2025-12-01 03:22:19] 2025-12-01 02:02:18,528 | INFO     | intersect: -4228257649.7589297
[2025-12-01 03:22:19] 2025-12-01 02:02:18,529 | INFO     | chi2: 2.5824503244814823
[2025-12-01 03:22:19] 2025-12-01 02:02:18,529 | INFO     | current chi2=2.5824503244814823 (change=0.7570610969773195 %)
[2025-12-01 03:22:19] 2025-12-01 02:02:18,529 | INFO     | left removable region: 20
[2025-12-01 03:22:19] 2025-12-01 02:02:18,531 | INFO     | sum of square deviations: 332946810584.4924
[2025-12-01 03:22:19] 2025-12-01 02:02:18,550 | INFO     | sum of deviations: 1048380125732.5878
[2025-12-01 03:22:19] 2025-12-01 02:02:18,550 | INFO     | mean x: 1764522634.6230469
[2025-12-01 03:22:19] 2025-12-01 02:02:18,550 | INFO     | mean y: 2299761.677734375
[2025-12-01 03:22:19] 2025-12-01 02:02:18,550 | INFO     | intersect: -5553814316.4136
[2025-12-01 03:22:19] 2025-12-01 02:02:18,552 | INFO     | chi2: 0.06058831751665978
[2025-12-01 03:22:19] 2025-12-01 02:02:18,552 | INFO     | current memory leak: 3.15 B/s (using 1024 data points, chi2=0.06)
[2025-12-01 03:22:19] 2025-12-01 02:02:18,553 | INFO     | could have reported an average CPU frequency of 2681 MHz (39 samples)
[2025-12-01 03:22:19] 2025-12-01 02:02:18,553 | INFO     | ..............................
[2025-12-01 03:22:19] 2025-12-01 02:02:18,553 | INFO     | . Timing measurements:
[2025-12-01 03:22:19] 2025-12-01 02:02:18,553 | INFO     | . get job = 0 s
[2025-12-01 03:22:19] 2025-12-01 02:02:18,553 | INFO     | . initial setup = 1 s
[2025-12-01 03:22:19] 2025-12-01 02:02:18,554 | INFO     | . payload setup = 7 s
[2025-12-01 03:22:19] 2025-12-01 02:02:18,554 | INFO     | . stage-in = 0 s
[2025-12-01 03:22:19] 2025-12-01 02:02:18,554 | INFO     | . payload execution = 64317 s
[2025-12-01 03:22:19] 2025-12-01 02:02:18,554 | INFO     | . stage-out = 2 s
[2025-12-01 03:22:19] 2025-12-01 02:02:18,554 | INFO     | . log creation = 0 s
[2025-12-01 03:22:19] 2025-12-01 02:02:18,554 | INFO     | ..............................
[2025-12-01 03:22:19] 2025-12-01 02:02:19,092 | INFO     | 
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | job summary report
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | --------------------------------------------------
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | PanDA job id: 6898686602
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | task id: 47556185
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | errors: (none)
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | pilot state: finished 
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | transexitcode: 0
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | exeerrorcode: 0
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | exeerrordiag: 
[2025-12-01 03:22:19] 2025-12-01 02:02:19,093 | INFO     | exitcode: 0
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | exitmsg: OK
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | cpuconsumptiontime: 247127 s
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | nevents: 1000
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | neventsw: 0
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | pid: 522332
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | pgrp: 522332
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | corecount: 4
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | event service: False
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | sizes: {0: 2284325, 1: 2284325, 5: 2284615, 11: 2284671, 64328: 2340158, 64330: 2349174, 64331: 2349358, 64339: 2349604}
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | --------------------------------------------------
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | 
[2025-12-01 03:22:19] 2025-12-01 02:02:19,094 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-12-01 03:22:19] 2025-12-01 02:02:19,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 03:22:19] 2025-12-01 02:02:19,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 03:22:19] 2025-12-01 02:02:19,116 | INFO     | job 6898686602 has completed (purged errors)
[2025-12-01 03:22:19] 2025-12-01 02:02:19,116 | INFO     | overall cleanup function is called
[2025-12-01 03:22:19] 2025-12-01 02:02:20,129 | INFO     | --- collectZombieJob: --- 10, [522332]
[2025-12-01 03:22:19] 2025-12-01 02:02:20,129 | INFO     | zombie collector waiting for pid 522332
[2025-12-01 03:22:19] 2025-12-01 02:02:20,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 03:22:19] 2025-12-01 02:02:20,130 | INFO     | collected zombie processes
[2025-12-01 03:22:19] 2025-12-01 02:02:20,130 | INFO     | will attempt to kill all subprocesses of pid=522332
[2025-12-01 03:22:19] 2025-12-01 02:02:20,508 | INFO     | process IDs to be killed: [522332] (in reverse order)
[2025-12-01 03:22:19] 2025-12-01 02:02:20,596 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 03:22:19] 2025-12-01 02:02:20,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 03:22:19] 2025-12-01 02:02:20,605 | INFO     | did not find any defunct processes belonging to 522332
[2025-12-01 03:22:19] 2025-12-01 02:02:20,614 | INFO     | did not find any defunct processes belonging to 522332
[2025-12-01 03:22:19] 2025-12-01 02:02:20,615 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 03:22:19] 2025-12-01 02:02:20,615 | INFO     | ready for new job
[2025-12-01 03:22:19] 2025-12-01 02:02:20,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 03:22:19] 2025-12-01 02:02:20,619 | INFO     | ***************************************
[2025-12-01 03:22:19] 2025-12-01 02:02:20,619 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 03:22:19] 2025-12-01 02:02:20,619 | INFO     | ***************************************
[2025-12-01 03:22:19] 2025-12-01 02:02:20,619 | INFO     | 
[2025-12-01 03:22:19] 2025-12-01 02:02:20,621 | INFO     | architecture information:
[2025-12-01 03:22:19] 2025-12-01 02:02:20,622 | INFO     | executing command: cat /etc/os-release
[2025-12-01 03:22:19] 2025-12-01 02:02:20,633 | INFO     | cat /etc/os-release:
[2025-12-01 03:22:19] NAME="CentOS Linux"
[2025-12-01 03:22:19] VERSION="7 (Core)"
[2025-12-01 03:22:19] ID="centos"
[2025-12-01 03:22:19] ID_LIKE="rhel fedora"
[2025-12-01 03:22:19] VERSION_ID="7"
[2025-12-01 03:22:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 03:22:19] ANSI_COLOR="0;31"
[2025-12-01 03:22:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 03:22:19] HOME_URL="https://www.centos.org/"
[2025-12-01 03:22:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 03:22:19] 
[2025-12-01 03:22:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 03:22:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 03:22:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 03:22:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 03:22:19] 
[2025-12-01 03:22:19] 2025-12-01 02:02:20,634 | INFO     | ***************************************
[2025-12-01 03:22:19] 2025-12-01 02:02:21,136 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-12-01 03:22:19] 2025-12-01 02:02:21,155 | INFO     | sufficient remaining disk space (627830685696 B)
[2025-12-01 03:22:19] 2025-12-01 02:02:21,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 03:22:19] 2025-12-01 02:02:21,156 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 03:22:19] 2025-12-01 02:02:21,156 | INFO     | update_server=False
[2025-12-01 03:22:19] 2025-12-01 02:02:21,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 03:22:19] 2025-12-01 02:02:21,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 03:22:19] 2025-12-01 02:02:21,461 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-01 03:22:19] 2025-12-01 02:02:21,461 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-01 03:22:19] 2025-12-01 02:02:21,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 03:22:19] 2025-12-01 02:02:21,461 | INFO     | will abort loop
[2025-12-01 03:22:19] 2025-12-01 02:02:21,506 | INFO     | all data control threads have been joined
[2025-12-01 03:22:19] 2025-12-01 02:02:21,661 | INFO     | all payload control threads have been joined
[2025-12-01 03:22:19] 2025-12-01 02:02:21,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 03:22:19] 2025-12-01 02:02:22,157 | INFO     | [job] retrieve thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:22,230 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:22,332 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:22,394 | INFO     | all job control threads have been joined
[2025-12-01 03:22:19] 2025-12-01 02:02:22,466 | INFO     | [job] job monitor thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:22,497 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:22,511 | INFO     | [data] control thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:22,611 | INFO     | [data] copytool_in thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:22,666 | INFO     | [payload] control thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:23,162 | INFO     | [data] copytool_out thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:23,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:23,238 | INFO     | [payload] validate_post thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:23,399 | INFO     | [job] control thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:23,573 | INFO     | [job] validate thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:23,655 | INFO     | [payload] failed_post thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:23,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 03:22:19] 2025-12-01 02:02:24,662 | INFO     | [job] queue monitor thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:25,704 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 03:22:19] 2025-12-01 02:02:32,561 | INFO     | [monitor] cgroup control has ended
[2025-12-01 03:22:19] 2025-12-01 02:02:32,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22647339616064)>', '<ExcThread(monitor, started 22646479628032)>']
[2025-12-01 03:22:19] 2025-12-01 02:02:37,729 | INFO     | all workflow threads have been joined
[2025-12-01 03:22:19] 2025-12-01 02:02:37,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 03:22:19] 2025-12-01 02:02:37,729 | INFO     | traces error code: 0
[2025-12-01 03:22:19] 2025-12-01 02:02:37,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 03:22:19] 2025-12-01 02:02:52,062 | INFO     | PID=515124 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-01 03:22:19] 2025-12-01 02:02:52,063 | INFO     | .. there are 5 such processes running
[2025-12-01 03:22:19] 2025-12-01 02:02:52,064 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 03:22:19] 2025-12-01 02:02:52,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 03:22:19] 2025-12-01 02:02:52,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 03:22:19] 2025-12-01 02:02:52,064 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 03:22:19] 2025-12-01 02:02:52,064 | INFO     | [monitor] control thread has ended
[2025-12-01 03:22:19] 2025-12-01 02:02:52,202 [wrapper] ==== pilot stdout END ====
[2025-12-01 03:22:19] 2025-12-01 02:02:52,206 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 03:22:19] 2025-12-01 02:02:52,209 [wrapper] pilotpid: 515124
[2025-12-01 03:22:19] 2025-12-01 02:02:52,212 [wrapper] Pilot exit status: 0
[2025-12-01 03:22:19] 2025-12-01 02:02:52,223 [wrapper] pandaids: 6898686602
[2025-12-01 03:22:19] 2025-12-01 02:02:52,300 [wrapper] cleanup supervisor_pilot 1454916 515125
[2025-12-01 03:22:19] 2025-12-01 02:02:52,303 [wrapper] Test setup, not cleaning
[2025-12-01 03:22:19] 2025-12-01 02:02:52,306 [wrapper] apfmon messages muted
[2025-12-01 03:22:19] 2025-12-01 02:02:52,309 [wrapper] ==== wrapper stdout END ====
[2025-12-01 03:22:19] 2025-12-01 02:02:52,312 [wrapper] ==== wrapper stderr END ====
[2025-12-01 03:22:19]  *** Error codes and diagnostics ***
[2025-12-01 03:22:19]     "exeErrorCode": 0,
[2025-12-01 03:22:19]     "exeErrorDiag": "",
[2025-12-01 03:22:19]     "pilotErrorCode": 0,
[2025-12-01 03:22:19]     "pilotErrorDiag": "",
[2025-12-01 03:22:19]  *** Listing of results directory ***
[2025-12-01 03:22:19] total 1329628
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc    598293 Nov  6 09:41 pilot3.tar.gz
[2025-12-01 03:22:19] -rwx------ 1 boinc boinc     36292 Nov 26 17:36 runpilot2-wrapper.sh
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc      5112 Nov 26 17:37 queuedata.json
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc       100 Nov 30 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 03:22:19] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 09:09 run_atlas
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc       105 Nov 30 09:09 job.xml
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc      6635 Nov 30 09:09 init_data.xml
[2025-12-01 03:22:19] -rw-r--r-- 2 boinc boinc 410444859 Nov 30 09:09 EVNT.47483658._004301.pool.root.1
[2025-12-01 03:22:19] -rw-r--r-- 2 boinc boinc     15847 Nov 30 09:09 start_atlas.sh
[2025-12-01 03:22:19] drwxrwx--x 2 boinc boinc      4096 Nov 30 09:09 shared
[2025-12-01 03:22:19] -rw-r--r-- 2 boinc boinc    611286 Nov 30 09:09 input.tar.gz
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc         0 Nov 30 09:09 boinc_lockfile
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc      2786 Nov 30 09:09 pandaJob.out
[2025-12-01 03:22:19] -rw------- 1 boinc boinc    991772 Nov 30 09:09 agis_schedconf.cvmfs.json
[2025-12-01 03:22:19] drwx------ 7 boinc boinc      4096 Nov 30 09:09 pilot3
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc       531 Dec  1 02:53 boinc_task_state.xml
[2025-12-01 03:22:19] -rw------- 1 boinc boinc 925706548 Dec  1 03:01 HITS.47556185._000646.pool.root.1
[2025-12-01 03:22:19] -rw------- 1 boinc boinc      1046 Dec  1 03:02 memory_monitor_summary.json
[2025-12-01 03:22:19] -rw------- 1 boinc boinc   1516240 Dec  1 03:02 agis_ddmendpoints.agis.ALL.json
[2025-12-01 03:22:19] -rw------- 1 boinc boinc   1780757 Dec  1 03:02 log.47556185._000646.job.log.tgz.1
[2025-12-01 03:22:19] -rw------- 1 boinc boinc      8626 Dec  1 03:02 heartbeat.json
[2025-12-01 03:22:19] -rw------- 1 boinc boinc        95 Dec  1 03:02 pilot_heartbeat.json
[2025-12-01 03:22:19] -rw------- 1 boinc boinc       821 Dec  1 03:02 pilotlog.txt
[2025-12-01 03:22:19] -rw------- 1 boinc boinc   8934544 Dec  1 03:02 log.47556185._000646.job.log.1
[2025-12-01 03:22:19] -rw------- 1 boinc boinc       353 Dec  1 03:02 output.list
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc       620 Dec  1 03:02 runtime_log
[2025-12-01 03:22:19] -rw------- 1 boinc boinc  10731520 Dec  1 03:02 result.tar.gz
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc      9206 Dec  1 03:02 runtime_log.err
[2025-12-01 03:22:19] -rw------- 1 boinc boinc       670 Dec  1 03:02 NxZKDmYgXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmy9JKDmwouNfn.diag
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc      8192 Dec  1 03:22 boinc_mmap_file
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc        28 Dec  1 03:22 wrapper_checkpoint.txt
[2025-12-01 03:22:19] -rw-r--r-- 1 boinc boinc     21073 Dec  1 03:22 stderr.txt
[2025-12-01 03:22:19] HITS file was successfully produced:
[2025-12-01 03:22:19] -rw------- 1 boinc boinc 925706548 Dec  1 03:01 shared/HITS.pool.root.1
[2025-12-01 03:22:19]  *** Contents of shared directory: ***
[2025-12-01 03:22:19] total 1315944
[2025-12-01 03:22:19] -rw-r--r-- 2 boinc boinc 410444859 Nov 30 09:09 ATLAS.root_0
[2025-12-01 03:22:19] -rw-r--r-- 2 boinc boinc     15847 Nov 30 09:09 start_atlas.sh
[2025-12-01 03:22:19] -rw-r--r-- 2 boinc boinc    611286 Nov 30 09:09 input.tar.gz
[2025-12-01 03:22:19] -rw------- 1 boinc boinc 925706548 Dec  1 03:01 HITS.pool.root.1
[2025-12-01 03:22:19] -rw------- 1 boinc boinc  10731520 Dec  1 03:02 result.tar.gz
03:22:21 (511374): run_atlas exited; CPU time 249537.494935
03:22:21 (511374): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN