Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:48:51 (4647): wrapper (7.7.26015): starting
06:48:51 (4647): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 06:48:51] Arguments: --nthreads 8
[2025-11-29 06:48:51] Threads: 8
[2025-11-29 06:48:51] Checking for CVMFS
[2025-11-29 06:48:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 06:48:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 06:48:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 06:48:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 06:48:53] 2.11.2.0 29208 226270 136592 153432 0 61 22741604 25165824 1774 130560 8 97996266 99.900 40481995 2339 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-29 06:48:53] CVMFS is ok
[2025-11-29 06:48:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 06:48:53] Checking for apptainer binary...
[2025-11-29 06:48:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 06:48:53] Running /usr/bin/apptainer --version
[2025-11-29 06:48:53] apptainer version 1.3.2-1.el7
[2025-11-29 06:48:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 06:49:00] cg-vwn345.simple-grid.lan
[2025-11-29 06:49:00] apptainer works
[2025-11-29 06:49:00] Set ATHENA_PROC_NUMBER=8
[2025-11-29 06:49:00] Set ATHENA_CORE_NUMBER=8
[2025-11-29 06:49:00] Starting ATLAS job with PandaID=6898489561
[2025-11-29 06:49:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 06:51:29]  *** The last 200 lines of the pilot log: ***
[2025-11-30 06:51:29] 2025-11-30 05:50:41,623 | INFO     | .. there are 9 such processes running
[2025-11-30 06:51:29] 2025-11-30 05:50:42,624 | INFO     | time since job start (86285s) is within the limit (172800.0s)
[2025-11-30 06:51:29] 2025-11-30 05:50:43,140 | INFO     | monitor loop #5816: job 0:6898489561 is in state 'finished'
[2025-11-30 06:51:29] 2025-11-30 05:50:43,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 06:51:29] 2025-11-30 05:50:44,632 | INFO     | time since job start (86287s) is within the limit (172800.0s)
[2025-11-30 06:51:29] 2025-11-30 05:50:45,648 | INFO     | monitor loop #5817: job 0:6898489561 is in state 'finished'
[2025-11-30 06:51:29] 2025-11-30 05:50:45,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 06:51:29] 2025-11-30 05:50:46,640 | INFO     | time since job start (86289s) is within the limit (172800.0s)
[2025-11-30 06:51:29] 2025-11-30 05:50:46,640 | INFO     | 86296s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-30 06:51:29] 2025-11-30 05:50:48,159 | INFO     | monitor loop #5818: job 0:6898489561 is in state 'finished'
[2025-11-30 06:51:29] 2025-11-30 05:50:48,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 06:51:29] 2025-11-30 05:50:48,647 | INFO     | time since job start (86291s) is within the limit (172800.0s)
[2025-11-30 06:51:29] 2025-11-30 05:50:50,655 | INFO     | time since job start (86293s) is within the limit (172800.0s)
[2025-11-30 06:51:29] 2025-11-30 05:50:50,675 | INFO     | monitor loop #5819: job 0:6898489561 is in state 'finished'
[2025-11-30 06:51:29] 2025-11-30 05:50:50,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 06:51:29] 2025-11-30 05:50:51,508 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 06:51:29] 2025-11-30 05:50:51,509 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-30 06:51:29] 2025-11-30 05:50:51,511 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6898489561/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 06:51:29] 2025-11-30 05:50:51,511 | INFO     | extracted standard info from prmon json
[2025-11-30 06:51:29] 2025-11-30 05:50:51,511 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 06:51:29] 2025-11-30 05:50:51,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 06:51:29] 2025-11-30 05:50:51,541 | INFO     | fitting pss+swap vs Time
[2025-11-30 06:51:29] 2025-11-30 05:50:51,544 | INFO     | sum of square deviations: 860016062173.9117
[2025-11-30 06:51:29] 2025-11-30 05:50:51,634 | INFO     | sum of deviations: 3280797202384.7085
[2025-11-30 06:51:29] 2025-11-30 05:50:51,634 | INFO     | mean x: 1764438893.080427
[2025-11-30 06:51:29] 2025-11-30 05:50:51,634 | INFO     | mean y: 2840972.294661922
[2025-11-30 06:51:29] 2025-11-30 05:50:51,634 | INFO     | intersect: -6728156783.217534
[2025-11-30 06:51:29] 2025-11-30 05:50:51,640 | INFO     | chi2: 22.28280260538382
[2025-11-30 06:51:29] 2025-11-30 05:50:51,647 | INFO     | sum of square deviations: 850867479198.0525
[2025-11-30 06:51:29] 2025-11-30 05:50:51,734 | INFO     | sum of deviations: 3742117477602.613
[2025-11-30 06:51:29] 2025-11-30 05:50:51,734 | INFO     | mean x: 1764438740.5842857
[2025-11-30 06:51:29] 2025-11-30 05:50:51,734 | INFO     | mean y: 2848661.1642857143
[2025-11-30 06:51:29] 2025-11-30 05:50:51,734 | INFO     | intersect: -7757157697.902013
[2025-11-30 06:51:29] 2025-11-30 05:50:51,736 | INFO     | chi2: 19.09349145796147
[2025-11-30 06:51:29] 2025-11-30 05:50:51,736 | INFO     | current chi2=19.09349145796147 (change=14.312881570165558 %)
[2025-11-30 06:51:29] 2025-11-30 05:50:51,736 | INFO     | right removable region: 1399
[2025-11-30 06:51:29] 2025-11-30 05:50:51,738 | INFO     | sum of square deviations: 850866553218.0527
[2025-11-30 06:51:29] 2025-11-30 05:50:51,797 | INFO     | sum of deviations: 2709763875923.1484
[2025-11-30 06:51:29] 2025-11-30 05:50:51,797 | INFO     | mean x: 1764439045.5842857
[2025-11-30 06:51:29] 2025-11-30 05:50:51,797 | INFO     | mean y: 2850489.325
[2025-11-30 06:51:29] 2025-11-30 05:50:51,797 | INFO     | intersect: -5616377542.273661
[2025-11-30 06:51:29] 2025-11-30 05:50:51,799 | INFO     | chi2: 17.897858733534303
[2025-11-30 06:51:29] 2025-11-30 05:50:51,799 | INFO     | current chi2=17.897858733534303 (change=19.678601249153722 %)
[2025-11-30 06:51:29] 2025-11-30 05:50:51,799 | INFO     | left removable region: 10
[2025-11-30 06:51:29] 2025-11-30 05:50:51,801 | INFO     | sum of square deviations: 830967630843.0243
[2025-11-30 06:51:29] 2025-11-30 05:50:51,858 | INFO     | sum of deviations: 2774251060053.3784
[2025-11-30 06:51:29] 2025-11-30 05:50:51,859 | INFO     | mean x: 1764439015.0928726
[2025-11-30 06:51:29] 2025-11-30 05:50:51,859 | INFO     | mean y: 2868413.2606191505
[2025-11-30 06:51:29] 2025-11-30 05:50:51,859 | INFO     | intersect: -5887850582.682607
[2025-11-30 06:51:29] 2025-11-30 05:50:51,861 | INFO     | chi2: 10.648804717838681
[2025-11-30 06:51:29] 2025-11-30 05:50:51,861 | INFO     | current memory leak: 3.34 B/s (using 1389 data points, chi2=10.65)
[2025-11-30 06:51:29] 2025-11-30 05:50:51,862 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-30 06:51:29] 2025-11-30 05:50:51,862 | INFO     | ..............................
[2025-11-30 06:51:29] 2025-11-30 05:50:51,862 | INFO     | . Timing measurements:
[2025-11-30 06:51:29] 2025-11-30 05:50:51,863 | INFO     | . get job = 0 s
[2025-11-30 06:51:29] 2025-11-30 05:50:51,863 | INFO     | . initial setup = 6 s
[2025-11-30 06:51:29] 2025-11-30 05:50:51,863 | INFO     | . payload setup = 168 s
[2025-11-30 06:51:29] 2025-11-30 05:50:51,863 | INFO     | . stage-in = 0 s
[2025-11-30 06:51:29] 2025-11-30 05:50:51,863 | INFO     | . payload execution = 85833 s
[2025-11-30 06:51:29] 2025-11-30 05:50:51,863 | INFO     | . stage-out = 5 s
[2025-11-30 06:51:29] 2025-11-30 05:50:51,863 | INFO     | . log creation = 2 s
[2025-11-30 06:51:29] 2025-11-30 05:50:51,863 | INFO     | ..............................
[2025-11-30 06:51:29] 2025-11-30 05:50:52,330 | INFO     | 
[2025-11-30 06:51:29] 2025-11-30 05:50:52,330 | INFO     | job summary report
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | --------------------------------------------------
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | PanDA job id: 6898489561
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | task id: 47556161
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | errors: (none)
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | pilot state: finished 
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | transexitcode: 0
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | exeerrorcode: 0
[2025-11-30 06:51:29] 2025-11-30 05:50:52,331 | INFO     | exeerrordiag: 
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | exitcode: 0
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | exitmsg: OK
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | cpuconsumptiontime: 323662 s
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | nevents: 1000
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | neventsw: 0
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | pid: 14994
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | pgrp: 14994
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | corecount: 8
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | event service: False
[2025-11-30 06:51:29] 2025-11-30 05:50:52,332 | INFO     | sizes: {0: 2284090, 1: 2284174, 2: 2284373, 12: 2284373, 23: 2284401, 34: 2284429, 45: 2284585, 55: 2284613, 66: 2284641, 77: 2284669, 87: 2284725, 88: 2285295, 98
[2025-11-30 06:51:29] 2025-11-30 05:50:52,333 | INFO     | --------------------------------------------------
[2025-11-30 06:51:29] 2025-11-30 05:50:52,333 | INFO     | 
[2025-11-30 06:51:29] 2025-11-30 05:50:52,333 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-30 06:51:29] 2025-11-30 05:50:52,675 | INFO     | time since job start (86295s) is within the limit (172800.0s)
[2025-11-30 06:51:29] 2025-11-30 05:50:52,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 06:51:29] 2025-11-30 05:50:52,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 06:51:29] 2025-11-30 05:50:52,777 | INFO     | job 6898489561 has completed (purged errors)
[2025-11-30 06:51:29] 2025-11-30 05:50:52,777 | INFO     | overall cleanup function is called
[2025-11-30 06:51:29] 2025-11-30 05:50:53,798 | INFO     | --- collectZombieJob: --- 10, [14994]
[2025-11-30 06:51:29] 2025-11-30 05:50:53,798 | INFO     | zombie collector waiting for pid 14994
[2025-11-30 06:51:29] 2025-11-30 05:50:53,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 06:51:29] 2025-11-30 05:50:53,799 | INFO     | collected zombie processes
[2025-11-30 06:51:29] 2025-11-30 05:50:53,799 | INFO     | will attempt to kill all subprocesses of pid=14994
[2025-11-30 06:51:29] 2025-11-30 05:50:53,955 | INFO     | process IDs to be killed: [14994] (in reverse order)
[2025-11-30 06:51:29] 2025-11-30 05:50:54,784 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 06:51:29] 2025-11-30 05:50:54,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 06:51:29] 2025-11-30 05:50:54,792 | INFO     | did not find any defunct processes belonging to 14994
[2025-11-30 06:51:29] 2025-11-30 05:50:54,795 | INFO     | did not find any defunct processes belonging to 14994
[2025-11-30 06:51:29] 2025-11-30 05:50:54,818 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 06:51:29] 2025-11-30 05:50:54,818 | INFO     | ready for new job
[2025-11-30 06:51:29] 2025-11-30 05:50:54,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 06:51:29] 2025-11-30 05:50:54,824 | INFO     | ***************************************
[2025-11-30 06:51:29] 2025-11-30 05:50:54,824 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 06:51:29] 2025-11-30 05:50:54,824 | INFO     | ***************************************
[2025-11-30 06:51:29] 2025-11-30 05:50:54,824 | INFO     | 
[2025-11-30 06:51:29] 2025-11-30 05:50:54,825 | INFO     | pilot is running in a VM
[2025-11-30 06:51:29] 2025-11-30 05:50:54,825 | INFO     | architecture information:
[2025-11-30 06:51:29] 2025-11-30 05:50:54,833 | INFO     | executing command: cat /etc/os-release
[2025-11-30 06:51:29] 2025-11-30 05:50:55,002 | INFO     | cat /etc/os-release:
[2025-11-30 06:51:29] NAME="CentOS Linux"
[2025-11-30 06:51:29] VERSION="7 (Core)"
[2025-11-30 06:51:29] ID="centos"
[2025-11-30 06:51:29] ID_LIKE="rhel fedora"
[2025-11-30 06:51:29] VERSION_ID="7"
[2025-11-30 06:51:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 06:51:29] ANSI_COLOR="0;31"
[2025-11-30 06:51:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 06:51:29] HOME_URL="https://www.centos.org/"
[2025-11-30 06:51:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 06:51:29] 
[2025-11-30 06:51:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 06:51:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 06:51:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 06:51:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 06:51:29] 
[2025-11-30 06:51:29] 2025-11-30 05:50:55,002 | INFO     | ***************************************
[2025-11-30 06:51:29] 2025-11-30 05:50:55,505 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-30 06:51:29] 2025-11-30 05:50:55,739 | INFO     | sufficient remaining disk space (487905558528 B)
[2025-11-30 06:51:29] 2025-11-30 05:50:55,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 06:51:29] 2025-11-30 05:50:55,739 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 06:51:29] 2025-11-30 05:50:55,739 | INFO     | update_server=False
[2025-11-30 06:51:29] 2025-11-30 05:50:55,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 06:51:29] 2025-11-30 05:50:56,366 | INFO     | all job control threads have been joined
[2025-11-30 06:51:29] 2025-11-30 05:50:56,648 | INFO     | all data control threads have been joined
[2025-11-30 06:51:29] 2025-11-30 05:50:56,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:51:29] 2025-11-30 05:50:56,720 | INFO     | aborting loop
[2025-11-30 06:51:29] 2025-11-30 05:50:56,745 | INFO     | [job] retrieve thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:56,828 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:56,896 | INFO     | all payload control threads have been joined
[2025-11-30 06:51:29] 2025-11-30 05:50:56,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 06:51:29] 2025-11-30 05:50:56,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:51:29] 2025-11-30 05:50:57,258 | INFO     | [payload] failed_post thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,272 | INFO     | [job] validate thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,372 | INFO     | [job] control thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,477 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,487 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,654 | INFO     | [data] control thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,726 | INFO     | [job] job monitor thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,761 | INFO     | [data] copytool_in thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:57,902 | INFO     | [payload] control thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:58,010 | INFO     | [job] queue monitor thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:58,276 | INFO     | [payload] validate_post thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:50:58,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 06:51:29] 2025-11-30 05:50:58,941 | INFO     | [data] copytool_out thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:51:02,482 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 06:51:29] 2025-11-30 05:51:07,546 | INFO     | [monitor] cgroup control has ended
[2025-11-30 06:51:29] 2025-11-30 05:51:09,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754468849472)>', '<ExcThread(monitor, started 139753722730240)>']
[2025-11-30 06:51:29] 2025-11-30 05:51:14,633 | INFO     | all workflow threads have been joined
[2025-11-30 06:51:29] 2025-11-30 05:51:14,633 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 06:51:29] 2025-11-30 05:51:14,634 | INFO     | traces error code: 0
[2025-11-30 06:51:29] 2025-11-30 05:51:14,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 06:51:29] 2025-11-30 05:51:25,833 | INFO     | PID=8433 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-30 06:51:29] 2025-11-30 05:51:25,833 | INFO     | .. there are 9 such processes running
[2025-11-30 06:51:29] 2025-11-30 05:51:25,833 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 06:51:29] 2025-11-30 05:51:25,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 06:51:29] 2025-11-30 05:51:25,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 06:51:29] 2025-11-30 05:51:25,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 06:51:29] 2025-11-30 05:51:25,834 | INFO     | [monitor] control thread has ended
[2025-11-30 06:51:29] 2025-11-30 05:51:26,062 [wrapper] ==== pilot stdout END ====
[2025-11-30 06:51:29] 2025-11-30 05:51:26,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 06:51:29] 2025-11-30 05:51:26,203 [wrapper] pilotpid: 8433
[2025-11-30 06:51:29] 2025-11-30 05:51:26,319 [wrapper] Pilot exit status: 0
[2025-11-30 06:51:29] 2025-11-30 05:51:26,682 [wrapper] pandaids: 6898489561
[2025-11-30 06:51:29] 2025-11-30 05:51:27,769 [wrapper] cleanup supervisor_pilot 31601 8434
[2025-11-30 06:51:29] 2025-11-30 05:51:27,863 [wrapper] Test setup, not cleaning
[2025-11-30 06:51:29] 2025-11-30 05:51:27,951 [wrapper] apfmon messages muted
[2025-11-30 06:51:29] 2025-11-30 05:51:28,041 [wrapper] ==== wrapper stdout END ====
[2025-11-30 06:51:29] 2025-11-30 05:51:28,120 [wrapper] ==== wrapper stderr END ====
[2025-11-30 06:51:29]  *** Error codes and diagnostics ***
[2025-11-30 06:51:29]     "exeErrorCode": 0,
[2025-11-30 06:51:29]     "exeErrorDiag": "",
[2025-11-30 06:51:29]     "pilotErrorCode": 0,
[2025-11-30 06:51:29]     "pilotErrorDiag": "",
[2025-11-30 06:51:29]  *** Listing of results directory ***
[2025-11-30 06:51:29] total 1334128
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc    576529 Nov 26 17:12 pilot3.tar.gz
[2025-11-30 06:51:29] -rwx------. 1 boinc boinc     36292 Nov 26 17:36 runpilot2-wrapper.sh
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc      5112 Nov 26 17:37 queuedata.json
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc       100 Nov 29 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 06:51:29] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 06:48 run_atlas
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc       105 Nov 29 06:48 job.xml
[2025-11-30 06:51:29] -rw-r--r--. 2 boinc boinc 410842458 Nov 29 06:48 EVNT.47483658._002648.pool.root.1
[2025-11-30 06:51:29] -rw-r--r--. 2 boinc boinc     15847 Nov 29 06:48 start_atlas.sh
[2025-11-30 06:51:29] drwxrwx--x. 2 boinc boinc        68 Nov 29 06:48 shared
[2025-11-30 06:51:29] -rw-r--r--. 2 boinc boinc    590108 Nov 29 06:48 input.tar.gz
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc      6392 Nov 29 06:48 init_data.xml
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc         0 Nov 29 06:48 boinc_lockfile
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc      2787 Nov 29 06:49 pandaJob.out
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc    991826 Nov 29 06:52 agis_schedconf.cvmfs.json
[2025-11-30 06:51:29] drwx------. 5 boinc boinc      4096 Nov 29 06:52 pilot3
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc       533 Nov 30 06:27 boinc_task_state.xml
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc 923365660 Nov 30 06:47 HITS.47556161._006304.pool.root.1
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc      1031 Nov 30 06:49 memory_monitor_summary.json
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc   1516240 Nov 30 06:49 agis_ddmendpoints.agis.ALL.json
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc   2489217 Nov 30 06:49 log.47556161._006304.job.log.tgz.1
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc        95 Nov 30 06:50 pilot_heartbeat.json
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc      8627 Nov 30 06:50 heartbeat.json
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc        29 Nov 30 06:51 wrapper_checkpoint.txt
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc      8192 Nov 30 06:51 boinc_mmap_file
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc       819 Nov 30 06:51 pilotlog.txt
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc  11526578 Nov 30 06:51 log.47556161._006304.job.log.1
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc       353 Nov 30 06:51 output.list
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc       620 Nov 30 06:51 runtime_log
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc  14039040 Nov 30 06:51 result.tar.gz
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc      8833 Nov 30 06:51 runtime_log.err
[2025-11-30 06:51:29] -rw-------. 1 boinc boinc       662 Nov 30 06:51 RObLDm3fXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbDNKDmbILInn.diag
[2025-11-30 06:51:29] -rw-r--r--. 1 boinc boinc     21412 Nov 30 06:51 stderr.txt
[2025-11-30 06:51:30] HITS file was successfully produced:
[2025-11-30 06:51:30] -rw-------. 1 boinc boinc 923365660 Nov 30 06:47 shared/HITS.pool.root.1
[2025-11-30 06:51:30]  *** Contents of shared directory: ***
[2025-11-30 06:51:30] total 1317252
[2025-11-30 06:51:30] -rw-r--r--. 2 boinc boinc 410842458 Nov 29 06:48 ATLAS.root_0
[2025-11-30 06:51:30] -rw-r--r--. 2 boinc boinc     15847 Nov 29 06:48 start_atlas.sh
[2025-11-30 06:51:30] -rw-r--r--. 2 boinc boinc    590108 Nov 29 06:48 input.tar.gz
[2025-11-30 06:51:30] -rw-------. 1 boinc boinc 923365660 Nov 30 06:47 HITS.pool.root.1
[2025-11-30 06:51:30] -rw-------. 1 boinc boinc  14039040 Nov 30 06:51 result.tar.gz
06:51:31 (4647): run_atlas exited; CPU time 324305.635377
06:51:31 (4647): called boinc_finish(0)

</stderr_txt>
]]>

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