Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:56:25 (30409): wrapper (7.7.26015): starting
14:56:25 (30409): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 14:56:25] Arguments: --nthreads 8
[2025-11-27 14:56:25] Threads: 8
[2025-11-27 14:56:25] Checking for CVMFS
[2025-11-27 14:56:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 14:56:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 14:56:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 14:56:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 14:56:25] 2.11.2.0 2781 73497 83824 153383 1 81 10377938 20275201 1 130560 0 21180920 99.877 4102324 33518 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 14:56:25] CVMFS is ok
[2025-11-27 14:56:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 14:56:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 14:56:25] Further information can be found at the LHC@home message board.
[2025-11-27 14:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 14:56:25] Checking for apptainer binary...
[2025-11-27 14:56:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 14:56:25] Running /usr/bin/apptainer --version
[2025-11-27 14:56:25] apptainer version 1.3.2-1.el7
[2025-11-27 14:56:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 14:56:26] c-115-16.aglt2.org
[2025-11-27 14:56:26] apptainer works
[2025-11-27 14:56:26] Set ATHENA_PROC_NUMBER=8
[2025-11-27 14:56:26] Set ATHENA_CORE_NUMBER=8
[2025-11-27 14:56:26] Starting ATLAS job with PandaID=6898413021
[2025-11-27 14:56:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 02:11:56]  *** The last 200 lines of the pilot log: ***
[2025-11-28 02:11:56] 2025-11-28 07:10:59,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:11:56] 2025-11-28 07:11:00,771 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 02:11:56] 2025-11-28 07:11:00,776 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-28 02:11:56] 2025-11-28 07:11:00,778 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898413021/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 02:11:56] 2025-11-28 07:11:00,779 | INFO     | extracted standard info from prmon json
[2025-11-28 02:11:56] 2025-11-28 07:11:00,779 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 02:11:56] 2025-11-28 07:11:00,779 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 02:11:56] 2025-11-28 07:11:00,791 | INFO     | fitting pss+swap vs Time
[2025-11-28 02:11:56] 2025-11-28 07:11:00,791 | INFO     | sum of square deviations: 90368593017.73161
[2025-11-28 02:11:56] 2025-11-28 07:11:00,800 | INFO     | sum of deviations: 538580682780.2752
[2025-11-28 02:11:56] 2025-11-28 07:11:00,800 | INFO     | mean x: 1764293626.622926
[2025-11-28 02:11:56] 2025-11-28 07:11:00,800 | INFO     | mean y: 3106755.745098039
[2025-11-28 02:11:56] 2025-11-28 07:11:00,800 | INFO     | intersect: -10511768316.671019
[2025-11-28 02:11:56] 2025-11-28 07:11:00,801 | INFO     | chi2: 6.77429025934085
[2025-11-28 02:11:56] 2025-11-28 07:11:00,802 | INFO     | sum of square deviations: 88339555353.27672
[2025-11-28 02:11:56] 2025-11-28 07:11:00,810 | INFO     | sum of deviations: 764428041276.0237
[2025-11-28 02:11:56] 2025-11-28 07:11:00,810 | INFO     | mean x: 1764293474.1276596
[2025-11-28 02:11:56] 2025-11-28 07:11:00,810 | INFO     | mean y: 3123721.3449848024
[2025-11-28 02:11:56] 2025-11-28 07:11:00,810 | INFO     | intersect: -15263824354.972815
[2025-11-28 02:11:56] 2025-11-28 07:11:00,811 | INFO     | chi2: 3.9033321743507274
[2025-11-28 02:11:56] 2025-11-28 07:11:00,811 | INFO     | current chi2=3.9033321743507274 (change=42.380204790183754 %)
[2025-11-28 02:11:56] 2025-11-28 07:11:00,812 | INFO     | sum of square deviations: 86341122913.79172
[2025-11-28 02:11:56] 2025-11-28 07:11:00,820 | INFO     | sum of deviations: 889727094270.1609
[2025-11-28 02:11:56] 2025-11-28 07:11:00,820 | INFO     | mean x: 1764293321.6324656
[2025-11-28 02:11:56] 2025-11-28 07:11:00,820 | INFO     | mean y: 3133279.8131699846
[2025-11-28 02:11:56] 2025-11-28 07:11:00,820 | INFO     | intersect: -18177537963.75669
[2025-11-28 02:11:56] 2025-11-28 07:11:00,821 | INFO     | chi2: 2.9515041165612854
[2025-11-28 02:11:56] 2025-11-28 07:11:00,821 | INFO     | current chi2=2.9515041165612854 (change=24.385012990798486 %)
[2025-11-28 02:11:56] 2025-11-28 07:11:00,821 | INFO     | right removable region: 652
[2025-11-28 02:11:56] 2025-11-28 07:11:00,822 | INFO     | sum of square deviations: 88339303423.27673
[2025-11-28 02:11:56] 2025-11-28 07:11:00,830 | INFO     | sum of deviations: 338920645187.0847
[2025-11-28 02:11:56] 2025-11-28 07:11:00,830 | INFO     | mean x: 1764293779.1276596
[2025-11-28 02:11:56] 2025-11-28 07:11:00,830 | INFO     | mean y: 3121731.5227963524
[2025-11-28 02:11:56] 2025-11-28 07:11:00,830 | INFO     | intersect: -6765729309.292062
[2025-11-28 02:11:56] 2025-11-28 07:11:00,831 | INFO     | chi2: 4.388485121343238
[2025-11-28 02:11:56] 2025-11-28 07:11:00,831 | INFO     | current chi2=4.388485121343238 (change=35.218525434570836 %)
[2025-11-28 02:11:56] 2025-11-28 07:11:00,832 | INFO     | sum of square deviations: 86340699208.3152
[2025-11-28 02:11:56] 2025-11-28 07:11:00,840 | INFO     | sum of deviations: 305002255268.4852
[2025-11-28 02:11:56] 2025-11-28 07:11:00,840 | INFO     | mean x: 1764293931.6294026
[2025-11-28 02:11:56] 2025-11-28 07:11:00,840 | INFO     | mean y: 3124317.5267993873
[2025-11-28 02:11:56] 2025-11-28 07:11:00,840 | INFO     | intersect: -6229320323.732795
[2025-11-28 02:11:56] 2025-11-28 07:11:00,841 | INFO     | chi2: 4.358619649704332
[2025-11-28 02:11:56] 2025-11-28 07:11:00,841 | INFO     | current chi2=4.358619649704332 (change=0.6805417088839176 %)
[2025-11-28 02:11:56] 2025-11-28 07:11:00,841 | INFO     | left removable region: 20
[2025-11-28 02:11:56] 2025-11-28 07:11:00,842 | INFO     | sum of square deviations: 78275973564.4668
[2025-11-28 02:11:56] 2025-11-28 07:11:00,849 | INFO     | sum of deviations: 626322178694.712
[2025-11-28 02:11:56] 2025-11-28 07:11:00,849 | INFO     | mean x: 1764293901.140823
[2025-11-28 02:11:56] 2025-11-28 07:11:00,849 | INFO     | mean y: 3157412.5537974685
[2025-11-28 02:11:56] 2025-11-28 07:11:00,850 | INFO     | intersect: -14113772083.190384
[2025-11-28 02:11:56] 2025-11-28 07:11:00,850 | INFO     | chi2: 0.33266330294064184
[2025-11-28 02:11:56] 2025-11-28 07:11:00,850 | INFO     | current memory leak: 8.00 B/s (using 632 data points, chi2=0.33)
[2025-11-28 02:11:56] 2025-11-28 07:11:00,851 | INFO     | could have reported an average CPU frequency of 2362 MHz (26 samples)
[2025-11-28 02:11:56] 2025-11-28 07:11:00,851 | INFO     | ..............................
[2025-11-28 02:11:56] 2025-11-28 07:11:00,851 | INFO     | . Timing measurements:
[2025-11-28 02:11:56] 2025-11-28 07:11:00,851 | INFO     | . get job = 0 s
[2025-11-28 02:11:56] 2025-11-28 07:11:00,852 | INFO     | . initial setup = 2 s
[2025-11-28 02:11:56] 2025-11-28 07:11:00,852 | INFO     | . payload setup = 8 s
[2025-11-28 02:11:56] 2025-11-28 07:11:00,852 | INFO     | . stage-in = 0 s
[2025-11-28 02:11:56] 2025-11-28 07:11:00,852 | INFO     | . payload execution = 40417 s
[2025-11-28 02:11:56] 2025-11-28 07:11:00,852 | INFO     | . stage-out = 3 s
[2025-11-28 02:11:56] 2025-11-28 07:11:00,852 | INFO     | . log creation = 0 s
[2025-11-28 02:11:56] 2025-11-28 07:11:00,852 | INFO     | ..............................
[2025-11-28 02:11:56] 2025-11-28 07:11:00,933 | INFO     | time since job start (40457s) is within the limit (172800.0s)
[2025-11-28 02:11:56] 2025-11-28 07:11:01,019 | INFO     | 
[2025-11-28 02:11:56] 2025-11-28 07:11:01,020 | INFO     | job summary report
[2025-11-28 02:11:56] 2025-11-28 07:11:01,020 | INFO     | --------------------------------------------------
[2025-11-28 02:11:56] 2025-11-28 07:11:01,020 | INFO     | PanDA job id: 6898413021
[2025-11-28 02:11:56] 2025-11-28 07:11:01,020 | INFO     | task id: 47556173
[2025-11-28 02:11:56] 2025-11-28 07:11:01,020 | INFO     | errors: (none)
[2025-11-28 02:11:56] 2025-11-28 07:11:01,020 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 02:11:56] 2025-11-28 07:11:01,021 | INFO     | pilot state: finished 
[2025-11-28 02:11:56] 2025-11-28 07:11:01,021 | INFO     | transexitcode: 0
[2025-11-28 02:11:56] 2025-11-28 07:11:01,021 | INFO     | exeerrorcode: 0
[2025-11-28 02:11:56] 2025-11-28 07:11:01,021 | INFO     | exeerrordiag: 
[2025-11-28 02:11:56] 2025-11-28 07:11:01,021 | INFO     | exitcode: 0
[2025-11-28 02:11:56] 2025-11-28 07:11:01,021 | INFO     | exitmsg: OK
[2025-11-28 02:11:56] 2025-11-28 07:11:01,022 | INFO     | cpuconsumptiontime: 312257 s
[2025-11-28 02:11:56] 2025-11-28 07:11:01,022 | INFO     | nevents: 1000
[2025-11-28 02:11:56] 2025-11-28 07:11:01,022 | INFO     | neventsw: 0
[2025-11-28 02:11:56] 2025-11-28 07:11:01,022 | INFO     | pid: 8198
[2025-11-28 02:11:56] 2025-11-28 07:11:01,022 | INFO     | pgrp: 8198
[2025-11-28 02:11:56] 2025-11-28 07:11:01,022 | INFO     | corecount: 8
[2025-11-28 02:11:56] 2025-11-28 07:11:01,023 | INFO     | event service: False
[2025-11-28 02:11:56] 2025-11-28 07:11:01,023 | INFO     | sizes: {0: 2284145, 1: 2284344, 6: 2284606, 11: 2284634, 40430: 2328451, 40433: 2337445, 40434: 2337629, 40440: 2337875}
[2025-11-28 02:11:56] 2025-11-28 07:11:01,023 | INFO     | --------------------------------------------------
[2025-11-28 02:11:56] 2025-11-28 07:11:01,023 | INFO     | 
[2025-11-28 02:11:56] 2025-11-28 07:11:01,023 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 02:11:56] 2025-11-28 07:11:01,052 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,053 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,055 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 02:11:56] 2025-11-28 07:11:01,056 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,056 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 02:11:56] 2025-11-28 07:11:01,056 | INFO     | job 6898413021 has completed (purged errors)
[2025-11-28 02:11:56] 2025-11-28 07:11:01,056 | INFO     | overall cleanup function is called
[2025-11-28 02:11:56] 2025-11-28 07:11:02,071 | INFO     | PID=1672 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 02:11:56] 2025-11-28 07:11:02,072 | INFO     | --- collectZombieJob: --- 10, [8198]
[2025-11-28 02:11:56] 2025-11-28 07:11:02,072 | INFO     | zombie collector waiting for pid 8198
[2025-11-28 02:11:56] 2025-11-28 07:11:02,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 02:11:56] 2025-11-28 07:11:02,072 | INFO     | collected zombie processes
[2025-11-28 02:11:56] 2025-11-28 07:11:02,073 | INFO     | will attempt to kill all subprocesses of pid=8198
[2025-11-28 02:11:56] 2025-11-28 07:11:02,158 | INFO     | process IDs to be killed: [8198] (in reverse order)
[2025-11-28 02:11:56] 2025-11-28 07:11:02,218 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 02:11:56] 2025-11-28 07:11:02,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 02:11:56] 2025-11-28 07:11:02,223 | INFO     | did not find any defunct processes belonging to 8198
[2025-11-28 02:11:56] 2025-11-28 07:11:02,227 | INFO     | did not find any defunct processes belonging to 8198
[2025-11-28 02:11:56] 2025-11-28 07:11:02,230 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 02:11:56] 2025-11-28 07:11:02,230 | INFO     | ready for new job
[2025-11-28 02:11:56] 2025-11-28 07:11:02,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 02:11:56] 2025-11-28 07:11:02,234 | INFO     | ***************************************
[2025-11-28 02:11:56] 2025-11-28 07:11:02,234 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 02:11:56] 2025-11-28 07:11:02,234 | INFO     | ***************************************
[2025-11-28 02:11:56] 2025-11-28 07:11:02,234 | INFO     | 
[2025-11-28 02:11:56] 2025-11-28 07:11:02,234 | INFO     | architecture information:
[2025-11-28 02:11:56] 2025-11-28 07:11:02,236 | INFO     | executing command: cat /etc/os-release
[2025-11-28 02:11:56] 2025-11-28 07:11:02,254 | INFO     | cat /etc/os-release:
[2025-11-28 02:11:56] NAME="CentOS Linux"
[2025-11-28 02:11:56] VERSION="7 (Core)"
[2025-11-28 02:11:56] ID="centos"
[2025-11-28 02:11:56] ID_LIKE="rhel fedora"
[2025-11-28 02:11:56] VERSION_ID="7"
[2025-11-28 02:11:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 02:11:56] ANSI_COLOR="0;31"
[2025-11-28 02:11:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 02:11:56] HOME_URL="https://www.centos.org/"
[2025-11-28 02:11:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 02:11:56] 
[2025-11-28 02:11:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 02:11:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 02:11:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 02:11:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 02:11:56] 
[2025-11-28 02:11:56] 2025-11-28 07:11:02,254 | INFO     | ***************************************
[2025-11-28 02:11:56] 2025-11-28 07:11:02,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 02:11:56] 2025-11-28 07:11:02,779 | INFO     | sufficient remaining disk space (17454596096 B)
[2025-11-28 02:11:56] 2025-11-28 07:11:02,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 02:11:56] 2025-11-28 07:11:02,780 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 02:11:56] 2025-11-28 07:11:02,780 | INFO     | update_server=False
[2025-11-28 02:11:56] 2025-11-28 07:11:02,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 02:11:56] 2025-11-28 07:11:02,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:11:56] 2025-11-28 07:11:02,782 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-28 02:11:56] 2025-11-28 07:11:02,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 02:11:56] 2025-11-28 07:11:02,783 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 02:11:56] 2025-11-28 07:11:02,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 02:11:56] 2025-11-28 07:11:02,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 02:11:56] 2025-11-28 07:11:02,788 | INFO     | all payload control threads have been joined
[2025-11-28 02:11:56] 2025-11-28 07:11:03,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:11:56] 2025-11-28 07:11:03,179 | INFO     | aborting loop
[2025-11-28 02:11:56] 2025-11-28 07:11:03,360 | INFO     | all data control threads have been joined
[2025-11-28 02:11:56] 2025-11-28 07:11:03,787 | INFO     | [job] retrieve thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:03,787 | INFO     | [job] queue monitor thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:03,794 | INFO     | [payload] control thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:03,948 | INFO     | [payload] failed_post thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,031 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,071 | INFO     | [job] validate thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,146 | INFO     | [data] copytool_in thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,185 | INFO     | [job] job monitor thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,269 | INFO     | all job control threads have been joined
[2025-11-28 02:11:56] 2025-11-28 07:11:04,332 | INFO     | [payload] validate_post thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,366 | INFO     | [data] control thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,588 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,785 | INFO     | [data] copytool_out thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,950 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:04,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 02:11:56] 2025-11-28 07:11:05,274 | INFO     | [job] control thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:08,968 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 02:11:56] 2025-11-28 07:11:47,762 [wrapper] supervise_pilot (15 min periods counter: 46)
[2025-11-28 02:11:56] 2025-11-28 07:11:50,490 | INFO     | [monitor] cgroup control has ended
[2025-11-28 02:11:56] 2025-11-28 07:11:51,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140705947842368)>', '<ExcThread(monitor, started 140705502570240)>']
[2025-11-28 02:11:56] 2025-11-28 07:11:52,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 02:11:56] 2025-11-28 07:11:52,006 | INFO     | [monitor] control thread has ended
[2025-11-28 02:11:56] 2025-11-28 07:11:56,081 | INFO     | all workflow threads have been joined
[2025-11-28 02:11:56] 2025-11-28 07:11:56,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 02:11:56] 2025-11-28 07:11:56,084 | INFO     | traces error code: 0
[2025-11-28 02:11:56] 2025-11-28 07:11:56,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 02:11:56] 2025-11-28 07:11:56,186 [wrapper] ==== pilot stdout END ====
[2025-11-28 02:11:56] 2025-11-28 07:11:56,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 02:11:56] 2025-11-28 07:11:56,195 [wrapper] pilotpid: 1672
[2025-11-28 02:11:56] 2025-11-28 07:11:56,199 [wrapper] Pilot exit status: 0
[2025-11-28 02:11:56] 2025-11-28 07:11:56,216 [wrapper] pandaids: 6898413021
[2025-11-28 02:11:56] 2025-11-28 07:11:56,264 [wrapper] cleanup supervisor_pilot  5150 1673
[2025-11-28 02:11:56] 2025-11-28 07:11:56,270 [wrapper] Test setup, not cleaning
[2025-11-28 02:11:56] 2025-11-28 07:11:56,275 [wrapper] apfmon messages muted
[2025-11-28 02:11:56] 2025-11-28 07:11:56,279 [wrapper] ==== wrapper stdout END ====
[2025-11-28 02:11:56] 2025-11-28 07:11:56,284 [wrapper] ==== wrapper stderr END ====
[2025-11-28 02:11:56]  *** Error codes and diagnostics ***
[2025-11-28 02:11:56]     "exeErrorCode": 0,
[2025-11-28 02:11:56]     "exeErrorDiag": "",
[2025-11-28 02:11:56]     "pilotErrorCode": 0,
[2025-11-28 02:11:56]     "pilotErrorDiag": "",
[2025-11-28 02:11:56]  *** Listing of results directory ***
[2025-11-28 02:11:56] total 1330056
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-28 02:11:56] -rwx------ 1 boincer umatlas     36292 Nov 26 11:36 runpilot2-wrapper.sh
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:37 queuedata.json
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas       100 Nov 27 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 02:11:56] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 14:56 run_atlas
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas       105 Nov 27 14:56 job.xml
[2025-11-28 02:11:56] -rw-r--r-- 2 boincer umatlas 413144184 Nov 27 14:56 EVNT.47483658._003213.pool.root.1
[2025-11-28 02:11:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 14:56 start_atlas.sh
[2025-11-28 02:11:56] drwxrwx--x 2 boincer umatlas      4096 Nov 27 14:56 shared
[2025-11-28 02:11:56] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 14:56 input.tar.gz
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas         0 Nov 27 14:56 boinc_lockfile
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas      2787 Nov 27 14:56 pandaJob.out
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas        57 Nov 27 14:56 setup.sh.local
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas    991191 Nov 27 14:56 agis_schedconf.cvmfs.json
[2025-11-28 02:11:56] drwx------ 5 boincer umatlas      4096 Nov 27 14:56 pilot3
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas       533 Nov 28 01:57 boinc_task_state.xml
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas        95 Nov 28 02:10 pilot_heartbeat.json
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas 929900901 Nov 28 02:10 HITS.47556173._001694.pool.root.1
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas      1064 Nov 28 02:10 memory_monitor_summary.json
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas   1516240 Nov 28 02:10 agis_ddmendpoints.agis.ALL.json
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas   1929704 Nov 28 02:10 log.47556173._001694.job.log.tgz.1
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas      8656 Nov 28 02:11 heartbeat.json
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas      5913 Nov 28 02:11 init_data.xml
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 02:11 boinc_mmap_file
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas        29 Nov 28 02:11 wrapper_checkpoint.txt
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas      4552 Nov 28 02:11 pilotlog.txt
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas   5575148 Nov 28 02:11 log.47556173._001694.job.log.1
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas       353 Nov 28 02:11 output.list
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas       620 Nov 28 02:11 runtime_log
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas   7526400 Nov 28 02:11 result.tar.gz
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas      9343 Nov 28 02:11 runtime_log.err
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas       668 Nov 28 02:11 L7kLDmNgXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDma8JKDmyhI9en.diag
[2025-11-28 02:11:56] -rw-r--r-- 1 boincer umatlas     21306 Nov 28 02:11 stderr.txt
[2025-11-28 02:11:56] HITS file was successfully produced:
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas 929900901 Nov 28 02:10 shared/HITS.pool.root.1
[2025-11-28 02:11:56]  *** Contents of shared directory: ***
[2025-11-28 02:11:56] total 1319524
[2025-11-28 02:11:56] -rw-r--r-- 2 boincer umatlas 413144184 Nov 27 14:56 ATLAS.root_0
[2025-11-28 02:11:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 14:56 start_atlas.sh
[2025-11-28 02:11:56] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 14:56 input.tar.gz
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas 929900901 Nov 28 02:10 HITS.pool.root.1
[2025-11-28 02:11:56] -rw------- 1 boincer umatlas   7526400 Nov 28 02:11 result.tar.gz
02:11:58 (30409): run_atlas exited; CPU time 310308.382383
02:11:58 (30409): called boinc_finish(0)

</stderr_txt>
]]>

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