Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:32:11 (4668): wrapper (7.7.26015): starting
15:32:11 (4668): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 15:32:11] Arguments: --nthreads 12
[2025-11-27 15:32:11] Threads: 12
[2025-11-27 15:32:11] Checking for CVMFS
[2025-11-27 15:32:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 15:32:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 15:32:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 15:32:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 15:32:11] 2.11.2.0 2979 289619 94248 153384 2 81 19547389 20275201 1 130560 1 129568517 99.975 16126428 13937 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 15:32:11] CVMFS is ok
[2025-11-27 15:32:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 15:32:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 15:32:11] Further information can be found at the LHC@home message board.
[2025-11-27 15:32:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 15:32:11] Checking for apptainer binary...
[2025-11-27 15:32:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 15:32:12] Running /usr/bin/apptainer --version
[2025-11-27 15:32:12] apptainer version 1.3.2-1.el7
[2025-11-27 15:32:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 15:32:13] c-205-21.aglt2.org
[2025-11-27 15:32:13] apptainer works
[2025-11-27 15:32:13] Set ATHENA_PROC_NUMBER=12
[2025-11-27 15:32:13] Set ATHENA_CORE_NUMBER=12
[2025-11-27 15:32:13] Starting ATLAS job with PandaID=6898378381
[2025-11-27 15:32:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:32:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:32:15] 2025-11-28 03:31:08,397 | INFO     | time since job start (25119s) is within the limit (172800.0s)
[2025-11-27 22:32:15] 2025-11-28 03:31:10,114 | INFO     | monitor loop #1884: job 0:6898378381 is in state 'finished'
[2025-11-27 22:32:15] 2025-11-28 03:31:10,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:32:15] 2025-11-28 03:31:10,403 | INFO     | time since job start (25121s) is within the limit (172800.0s)
[2025-11-27 22:32:15] 2025-11-28 03:31:10,974 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 22:32:15] 2025-11-28 03:31:10,979 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-27 22:32:15] 2025-11-28 03:31:10,981 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898378381/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:32:15] 2025-11-28 03:31:10,985 | INFO     | extracted standard info from prmon json
[2025-11-27 22:32:15] 2025-11-28 03:31:10,985 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:32:15] 2025-11-28 03:31:10,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:32:15] 2025-11-28 03:31:10,992 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:32:15] 2025-11-28 03:31:10,992 | INFO     | sum of square deviations: 21685443718.900753
[2025-11-27 22:32:15] 2025-11-28 03:31:10,996 | INFO     | sum of deviations: 282646306045.0265
[2025-11-27 22:32:15] 2025-11-28 03:31:10,996 | INFO     | mean x: 1764288114.7791262
[2025-11-27 22:32:15] 2025-11-28 03:31:10,996 | INFO     | mean y: 3420442.3519417476
[2025-11-27 22:32:15] 2025-11-28 03:31:10,996 | INFO     | intersect: -22992167054.28894
[2025-11-27 22:32:15] 2025-11-28 03:31:10,997 | INFO     | chi2: 6.565027439841331
[2025-11-27 22:32:15] 2025-11-28 03:31:10,997 | INFO     | sum of square deviations: 20905501378.50616
[2025-11-27 22:32:15] 2025-11-28 03:31:11,001 | INFO     | sum of deviations: 446737265533.327
[2025-11-27 22:32:15] 2025-11-28 03:31:11,001 | INFO     | mean x: 1764287962.2825553
[2025-11-27 22:32:15] 2025-11-28 03:31:11,001 | INFO     | mean y: 3452495.031941032
[2025-11-27 22:32:15] 2025-11-28 03:31:11,001 | INFO     | intersect: -37698258916.38768
[2025-11-27 22:32:15] 2025-11-28 03:31:11,002 | INFO     | chi2: 3.328697387771122
[2025-11-27 22:32:15] 2025-11-28 03:31:11,002 | INFO     | current chi2=3.328697387771122 (change=49.296519804773695 %)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,002 | INFO     | sum of square deviations: 20144489625.60195
[2025-11-27 22:32:15] 2025-11-28 03:31:11,006 | INFO     | sum of deviations: 513726879027.57227
[2025-11-27 22:32:15] 2025-11-28 03:31:11,006 | INFO     | mean x: 1764287809.7860696
[2025-11-27 22:32:15] 2025-11-28 03:31:11,007 | INFO     | mean y: 3465876.4950248757
[2025-11-27 22:32:15] 2025-11-28 03:31:11,007 | INFO     | intersect: -44989586172.63104
[2025-11-27 22:32:15] 2025-11-28 03:31:11,007 | INFO     | chi2: 2.58769507145086
[2025-11-27 22:32:15] 2025-11-28 03:31:11,007 | INFO     | current chi2=2.58769507145086 (change=22.261029766254396 %)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,007 | INFO     | right removable region: 401
[2025-11-27 22:32:15] 2025-11-28 03:31:11,008 | INFO     | sum of square deviations: 20905431228.50614
[2025-11-27 22:32:15] 2025-11-28 03:31:11,012 | INFO     | sum of deviations: 142856854158.93646
[2025-11-27 22:32:15] 2025-11-28 03:31:11,012 | INFO     | mean x: 1764288267.2825553
[2025-11-27 22:32:15] 2025-11-28 03:31:11,012 | INFO     | mean y: 3447693.0614250614
[2025-11-27 22:32:15] 2025-11-28 03:31:11,012 | INFO     | intersect: -12052781568.061405
[2025-11-27 22:32:15] 2025-11-28 03:31:11,013 | INFO     | chi2: 4.14192491690574
[2025-11-27 22:32:15] 2025-11-28 03:31:11,013 | INFO     | current chi2=4.14192491690574 (change=36.909252019731916 %)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,013 | INFO     | sum of square deviations: 20144374152.171593
[2025-11-27 22:32:15] 2025-11-28 03:31:11,018 | INFO     | sum of deviations: 111893601631.16414
[2025-11-27 22:32:15] 2025-11-28 03:31:11,018 | INFO     | mean x: 1764288419.783582
[2025-11-27 22:32:15] 2025-11-28 03:31:11,018 | INFO     | mean y: 3453889.6915422888
[2025-11-27 22:32:15] 2025-11-28 03:31:11,018 | INFO     | intersect: -9796432873.455122
[2025-11-27 22:32:15] 2025-11-28 03:31:11,018 | INFO     | chi2: 4.081332923127086
[2025-11-27 22:32:15] 2025-11-28 03:31:11,018 | INFO     | current chi2=4.081332923127086 (change=1.4628945476858208 %)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,019 | INFO     | left removable region: 20
[2025-11-27 22:32:15] 2025-11-28 03:31:11,019 | INFO     | sum of square deviations: 17149552644.241444
[2025-11-27 22:32:15] 2025-11-28 03:31:11,022 | INFO     | sum of deviations: 303529517715.092
[2025-11-27 22:32:15] 2025-11-28 03:31:11,022 | INFO     | mean x: 1764288389.288714
[2025-11-27 22:32:15] 2025-11-28 03:31:11,022 | INFO     | mean y: 3509699.0446194224
[2025-11-27 22:32:15] 2025-11-28 03:31:11,023 | INFO     | intersect: -31222587856.972794
[2025-11-27 22:32:15] 2025-11-28 03:31:11,023 | INFO     | chi2: 0.03377082387647977
[2025-11-27 22:32:15] 2025-11-28 03:31:11,023 | INFO     | current memory leak: 17.70 B/s (using 381 data points, chi2=0.03)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,023 | INFO     | could have reported an average CPU frequency of 2396 MHz (17 samples)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | ..............................
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | . Timing measurements:
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | . get job = 0 s
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | . initial setup = 2 s
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | . payload setup = 7 s
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | . stage-in = 0 s
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | . payload execution = 25083 s
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | . stage-out = 3 s
[2025-11-27 22:32:15] 2025-11-28 03:31:11,024 | INFO     | . log creation = 0 s
[2025-11-27 22:32:15] 2025-11-28 03:31:11,025 | INFO     | ..............................
[2025-11-27 22:32:15] 2025-11-28 03:31:11,106 | INFO     | 
[2025-11-27 22:32:15] 2025-11-28 03:31:11,106 | INFO     | job summary report
[2025-11-27 22:32:15] 2025-11-28 03:31:11,106 | INFO     | --------------------------------------------------
[2025-11-27 22:32:15] 2025-11-28 03:31:11,106 | INFO     | PanDA job id: 6898378381
[2025-11-27 22:32:15] 2025-11-28 03:31:11,107 | INFO     | task id: 47556173
[2025-11-27 22:32:15] 2025-11-28 03:31:11,107 | INFO     | errors: (none)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:32:15] 2025-11-28 03:31:11,107 | INFO     | pilot state: finished 
[2025-11-27 22:32:15] 2025-11-28 03:31:11,107 | INFO     | transexitcode: 0
[2025-11-27 22:32:15] 2025-11-28 03:31:11,107 | INFO     | exeerrorcode: 0
[2025-11-27 22:32:15] 2025-11-28 03:31:11,108 | INFO     | exeerrordiag: 
[2025-11-27 22:32:15] 2025-11-28 03:31:11,108 | INFO     | exitcode: 0
[2025-11-27 22:32:15] 2025-11-28 03:31:11,108 | INFO     | exitmsg: OK
[2025-11-27 22:32:15] 2025-11-28 03:31:11,108 | INFO     | cpuconsumptiontime: 287537 s
[2025-11-27 22:32:15] 2025-11-28 03:31:11,108 | INFO     | nevents: 1000
[2025-11-27 22:32:15] 2025-11-28 03:31:11,108 | INFO     | neventsw: 0
[2025-11-27 22:32:15] 2025-11-28 03:31:11,108 | INFO     | pid: 14734
[2025-11-27 22:32:15] 2025-11-28 03:31:11,109 | INFO     | pgrp: 14734
[2025-11-27 22:32:15] 2025-11-28 03:31:11,109 | INFO     | corecount: 12
[2025-11-27 22:32:15] 2025-11-28 03:31:11,109 | INFO     | event service: False
[2025-11-27 22:32:15] 2025-11-28 03:31:11,109 | INFO     | sizes: {0: 2284145, 1: 2284344, 6: 2284606, 12: 2284634, 25095: 2321559, 25099: 2330553, 25101: 2330737, 25106: 2331047}
[2025-11-27 22:32:15] 2025-11-28 03:31:11,109 | INFO     | --------------------------------------------------
[2025-11-27 22:32:15] 2025-11-28 03:31:11,109 | INFO     | 
[2025-11-27 22:32:15] 2025-11-28 03:31:11,110 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 22:32:15] 2025-11-28 03:31:11,132 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,133 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,135 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:32:15] 2025-11-28 03:31:11,136 | INFO     | job 6898378381 has completed (purged errors)
[2025-11-27 22:32:15] 2025-11-28 03:31:11,136 | INFO     | overall cleanup function is called
[2025-11-27 22:32:15] 2025-11-28 03:31:12,153 | INFO     | --- collectZombieJob: --- 10, [14734]
[2025-11-27 22:32:15] 2025-11-28 03:31:12,153 | INFO     | zombie collector waiting for pid 14734
[2025-11-27 22:32:15] 2025-11-28 03:31:12,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:32:15] 2025-11-28 03:31:12,154 | INFO     | collected zombie processes
[2025-11-27 22:32:15] 2025-11-28 03:31:12,154 | INFO     | will attempt to kill all subprocesses of pid=14734
[2025-11-27 22:32:15] 2025-11-28 03:31:12,246 | INFO     | process IDs to be killed: [14734] (in reverse order)
[2025-11-27 22:32:15] 2025-11-28 03:31:12,299 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:32:15] 2025-11-28 03:31:12,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:32:15] 2025-11-28 03:31:12,303 | INFO     | did not find any defunct processes belonging to 14734
[2025-11-27 22:32:15] 2025-11-28 03:31:12,306 | INFO     | did not find any defunct processes belonging to 14734
[2025-11-27 22:32:15] 2025-11-28 03:31:12,308 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:32:15] 2025-11-28 03:31:12,308 | INFO     | ready for new job
[2025-11-27 22:32:15] 2025-11-28 03:31:12,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:32:15] 2025-11-28 03:31:12,311 | INFO     | ***************************************
[2025-11-27 22:32:15] 2025-11-28 03:31:12,311 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:32:15] 2025-11-28 03:31:12,311 | INFO     | ***************************************
[2025-11-27 22:32:15] 2025-11-28 03:31:12,311 | INFO     | 
[2025-11-27 22:32:15] 2025-11-28 03:31:12,312 | INFO     | architecture information:
[2025-11-27 22:32:15] 2025-11-28 03:31:12,313 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:32:15] 2025-11-28 03:31:12,328 | INFO     | cat /etc/os-release:
[2025-11-27 22:32:15] NAME="CentOS Linux"
[2025-11-27 22:32:15] VERSION="7 (Core)"
[2025-11-27 22:32:15] ID="centos"
[2025-11-27 22:32:15] ID_LIKE="rhel fedora"
[2025-11-27 22:32:15] VERSION_ID="7"
[2025-11-27 22:32:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:32:15] ANSI_COLOR="0;31"
[2025-11-27 22:32:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:32:15] HOME_URL="https://www.centos.org/"
[2025-11-27 22:32:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:32:15] 
[2025-11-27 22:32:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:32:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:32:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:32:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:32:15] 
[2025-11-27 22:32:15] 2025-11-28 03:31:12,328 | INFO     | ***************************************
[2025-11-27 22:32:15] 2025-11-28 03:31:12,831 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 22:32:15] 2025-11-28 03:31:12,848 | INFO     | sufficient remaining disk space (28252831744 B)
[2025-11-27 22:32:15] 2025-11-28 03:31:12,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:32:15] 2025-11-28 03:31:12,849 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:32:15] 2025-11-28 03:31:12,849 | INFO     | update_server=False
[2025-11-27 22:32:15] 2025-11-28 03:31:12,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:32:15] 2025-11-28 03:31:12,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:32:15] 2025-11-28 03:31:12,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:32:15] 2025-11-28 03:31:13,193 | INFO     | all data control threads have been joined
[2025-11-27 22:32:15] 2025-11-28 03:31:13,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:32:15] 2025-11-28 03:31:13,623 | INFO     | aborting loop
[2025-11-27 22:32:15] 2025-11-28 03:31:13,854 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:13,855 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:13,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:32:15] 2025-11-28 03:31:13,972 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:14,109 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:14,157 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:14,168 | INFO     | all payload control threads have been joined
[2025-11-27 22:32:15] 2025-11-28 03:31:14,199 | INFO     | [data] control thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:14,249 | INFO     | all job control threads have been joined
[2025-11-27 22:32:15] 2025-11-28 03:31:14,258 | INFO     | [job] validate thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:14,342 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:14,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:14,628 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:15,141 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:15,170 | INFO     | [payload] control thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:15,247 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:15,254 | INFO     | [job] control thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:15,920 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:16,855 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:32:15] 2025-11-28 03:31:43,603 | INFO     | PID=8365 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 22:32:15] 2025-11-28 03:31:43,603 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:32:15] 2025-11-28 03:31:43,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:32:15] 2025-11-28 03:31:43,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:32:15] 2025-11-28 03:32:09,779 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:32:15] 2025-11-28 03:32:10,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140576943609664)>', '<ExcThread(monitor, started 140575688881920)>']
[2025-11-27 22:32:15] 2025-11-28 03:32:10,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:32:15] 2025-11-28 03:32:10,735 | INFO     | [monitor] control thread has ended
[2025-11-27 22:32:15] 2025-11-28 03:32:15,286 | INFO     | all workflow threads have been joined
[2025-11-27 22:32:15] 2025-11-28 03:32:15,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:32:15] 2025-11-28 03:32:15,293 | INFO     | traces error code: 0
[2025-11-27 22:32:15] 2025-11-28 03:32:15,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:32:15] 2025-11-28 03:32:15,383 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:32:15] 2025-11-28 03:32:15,387 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:32:15] 2025-11-28 03:32:15,391 [wrapper] pilotpid: 8365
[2025-11-27 22:32:15] 2025-11-28 03:32:15,395 [wrapper] Pilot exit status: 0
[2025-11-27 22:32:15] 2025-11-28 03:32:15,409 [wrapper] pandaids: 6898378381
[2025-11-27 22:32:15] 2025-11-28 03:32:15,456 [wrapper] cleanup supervisor_pilot 31063 8366
[2025-11-27 22:32:15] 2025-11-28 03:32:15,460 [wrapper] Test setup, not cleaning
[2025-11-27 22:32:15] 2025-11-28 03:32:15,464 [wrapper] apfmon messages muted
[2025-11-27 22:32:15] 2025-11-28 03:32:15,468 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:32:15] 2025-11-28 03:32:15,472 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:32:15]  *** Error codes and diagnostics ***
[2025-11-27 22:32:15]     "exeErrorCode": 0,
[2025-11-27 22:32:15]     "exeErrorDiag": "",
[2025-11-27 22:32:15]     "pilotErrorCode": 0,
[2025-11-27 22:32:15]     "pilotErrorDiag": "",
[2025-11-27 22:32:15]  *** Listing of results directory ***
[2025-11-27 22:32:15] total 1301908
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 22:32:15] -rwx------ 1 boincer umatlas     36292 Nov 26 11:36 runpilot2-wrapper.sh
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:37 queuedata.json
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas       100 Nov 27 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:32:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 15:32 run_atlas
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas       105 Nov 27 15:32 job.xml
[2025-11-27 22:32:15] -rw-r--r-- 2 boincer umatlas 410403995 Nov 27 15:32 EVNT.47483658._003208.pool.root.1
[2025-11-27 22:32:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 15:32 start_atlas.sh
[2025-11-27 22:32:15] drwxrwx--x 2 boincer umatlas      4096 Nov 27 15:32 shared
[2025-11-27 22:32:15] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 15:32 input.tar.gz
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas         0 Nov 27 15:32 boinc_lockfile
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas      2787 Nov 27 15:32 pandaJob.out
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas        57 Nov 27 15:32 setup.sh.local
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas    991500 Nov 27 15:32 agis_schedconf.cvmfs.json
[2025-11-27 22:32:15] drwx------ 5 boincer umatlas      4096 Nov 27 15:32 pilot3
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas       533 Nov 27 22:20 boinc_task_state.xml
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 22:27 init_data.xml
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas 907443936 Nov 27 22:30 HITS.47556173._001646.pool.root.1
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas      1065 Nov 27 22:30 memory_monitor_summary.json
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas   1516240 Nov 27 22:31 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas   2182127 Nov 27 22:31 log.47556173._001646.job.log.tgz.1
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas      8662 Nov 27 22:31 heartbeat.json
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas        95 Nov 27 22:31 pilot_heartbeat.json
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 22:31 boinc_mmap_file
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas        29 Nov 27 22:31 wrapper_checkpoint.txt
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas      4745 Nov 27 22:32 pilotlog.txt
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas   3514112 Nov 27 22:32 log.47556173._001646.job.log.1
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas       353 Nov 27 22:32 output.list
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas       620 Nov 27 22:32 runtime_log
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas   5713920 Nov 27 22:32 result.tar.gz
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 22:32 runtime_log.err
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas       670 Nov 27 22:32 fQFODmMgXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmx7JKDmpLFUCo.diag
[2025-11-27 22:32:15] -rw-r--r-- 1 boincer umatlas     21326 Nov 27 22:32 stderr.txt
[2025-11-27 22:32:15] HITS file was successfully produced:
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas 907443936 Nov 27 22:30 shared/HITS.pool.root.1
[2025-11-27 22:32:15]  *** Contents of shared directory: ***
[2025-11-27 22:32:15] total 1293144
[2025-11-27 22:32:15] -rw-r--r-- 2 boincer umatlas 410403995 Nov 27 15:32 ATLAS.root_0
[2025-11-27 22:32:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 15:32 start_atlas.sh
[2025-11-27 22:32:15] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 15:32 input.tar.gz
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas 907443936 Nov 27 22:30 HITS.pool.root.1
[2025-11-27 22:32:15] -rw------- 1 boincer umatlas   5713920 Nov 27 22:32 result.tar.gz
22:32:16 (4668): run_atlas exited; CPU time 281185.478413
22:32:16 (4668): called boinc_finish(0)

</stderr_txt>
]]>

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