Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:57:31 (3244027): wrapper (7.7.26015): starting
16:57:31 (3244027): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 16:57:31] Arguments: --nthreads 8
[2025-11-27 16:57:31] Threads: 8
[2025-11-27 16:57:31] Checking for CVMFS
[2025-11-27 16:57:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 16:57:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 16:57:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 16:57:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 16:57:34] 2.13.2.0 8058 37848 288852 153385 3 323 30337112 40960001 12708 16776704 0 41376781 99.731 27526010 35607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 16:57:34] CVMFS is ok
[2025-11-27 16:57:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 16:57:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 16:57:34] Further information can be found at the LHC@home message board.
[2025-11-27 16:57:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 16:57:34] Checking for apptainer binary...
[2025-11-27 16:57:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 16:57:34] Running /usr/bin/apptainer --version
[2025-11-27 16:57:34] apptainer version 1.4.4-1.el9
[2025-11-27 16:57:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 16:57:35] c-210-33-3.aglt2.org
[2025-11-27 16:57:35] apptainer works
[2025-11-27 16:57:35] Set ATHENA_PROC_NUMBER=8
[2025-11-27 16:57:35] Set ATHENA_CORE_NUMBER=8
[2025-11-27 16:57:35] Starting ATLAS job with PandaID=6898687479
[2025-11-27 16:57:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 11:27:49]  *** The last 200 lines of the pilot log: ***
[2025-11-28 11:27:49] 2025-11-28 16:26:43,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:27:49] 2025-11-28 16:26:44,975 | INFO     | time since job start (66484s) is within the limit (172800.0s)
[2025-11-28 11:27:49] 2025-11-28 16:26:45,552 | INFO     | monitor loop #4261: job 0:6898687479 is in state 'finished'
[2025-11-28 11:27:49] 2025-11-28 16:26:45,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:27:49] 2025-11-28 16:26:46,983 | INFO     | time since job start (66486s) is within the limit (172800.0s)
[2025-11-28 11:27:49] 2025-11-28 16:26:48,059 | INFO     | monitor loop #4262: job 0:6898687479 is in state 'finished'
[2025-11-28 11:27:49] 2025-11-28 16:26:48,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:27:49] 2025-11-28 16:26:49,024 | INFO     | time since job start (66489s) is within the limit (172800.0s)
[2025-11-28 11:27:49] 2025-11-28 16:26:50,648 | INFO     | monitor loop #4263: job 0:6898687479 is in state 'finished'
[2025-11-28 11:27:49] 2025-11-28 16:26:50,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:27:49] 2025-11-28 16:26:52,528 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 11:27:49] 2025-11-28 16:26:52,563 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2818.455642857144
[2025-11-28 11:27:49] 2025-11-28 16:26:52,582 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6898687479/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 11:27:49] 2025-11-28 16:26:52,586 | INFO     | extracted standard info from prmon json
[2025-11-28 11:27:49] 2025-11-28 16:26:52,586 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 11:27:49] 2025-11-28 16:26:52,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 11:27:49] 2025-11-28 16:26:52,661 | INFO     | fitting pss+swap vs Time
[2025-11-28 11:27:49] 2025-11-28 16:26:52,736 | INFO     | sum of square deviations: 398272259521.9731
[2025-11-28 11:27:49] 2025-11-28 16:26:53,203 | INFO     | sum of deviations: -23393656646.82167
[2025-11-28 11:27:49] 2025-11-28 16:26:53,205 | INFO     | mean x: 1764313983.1094756
[2025-11-28 11:27:49] 2025-11-28 16:26:53,205 | INFO     | mean y: 2874319.225390984
[2025-11-28 11:27:49] 2025-11-28 16:26:53,205 | INFO     | intersect: 106506331.12496012
[2025-11-28 11:27:49] 2025-11-28 16:26:53,277 | INFO     | chi2: 32.79449381239813
[2025-11-28 11:27:49] 2025-11-28 16:26:53,278 | INFO     | sum of square deviations: 392802362327.35876
[2025-11-28 11:27:49] 2025-11-28 16:26:53,355 | INFO     | monitor loop #4264: job 0:6898687479 is in state 'finished'
[2025-11-28 11:27:49] 2025-11-28 16:26:53,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:27:49] 2025-11-28 16:26:53,806 | INFO     | PID=3249009 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 11:27:49] 2025-11-28 16:26:53,806 | INFO     | .. there are 13 such processes running
[2025-11-28 11:27:49] 2025-11-28 16:26:53,851 | INFO     | sum of deviations: 336383472775.8174
[2025-11-28 11:27:49] 2025-11-28 16:26:53,851 | INFO     | mean x: 1764313830.6182995
[2025-11-28 11:27:49] 2025-11-28 16:26:53,851 | INFO     | mean y: 2884347.4232902033
[2025-11-28 11:27:49] 2025-11-28 16:26:53,851 | INFO     | intersect: -1508018005.335937
[2025-11-28 11:27:49] 2025-11-28 16:26:53,852 | INFO     | chi2: 29.297070312925683
[2025-11-28 11:27:49] 2025-11-28 16:26:53,852 | INFO     | current chi2=29.297070312925683 (change=10.6646668171784 %)
[2025-11-28 11:27:49] 2025-11-28 16:26:53,853 | INFO     | right removable region: 1081
[2025-11-28 11:27:49] 2025-11-28 16:26:53,854 | INFO     | sum of square deviations: 392801029657.1193
[2025-11-28 11:27:49] 2025-11-28 16:26:54,065 | INFO     | sum of deviations: -431687709214.3601
[2025-11-28 11:27:49] 2025-11-28 16:26:54,065 | INFO     | mean x: 1764314135.6192236
[2025-11-28 11:27:49] 2025-11-28 16:26:54,065 | INFO     | mean y: 2885697.6423290204
[2025-11-28 11:27:49] 2025-11-28 16:26:54,065 | INFO     | intersect: 1941864137.1968658
[2025-11-28 11:27:49] 2025-11-28 16:26:54,066 | INFO     | chi2: 29.326731399910624
[2025-11-28 11:27:49] 2025-11-28 16:26:54,066 | INFO     | current chi2=29.326731399910624 (change=10.574221490732388 %)
[2025-11-28 11:27:49] 2025-11-28 16:26:54,066 | INFO     | left removable region: 10
[2025-11-28 11:27:49] 2025-11-28 16:26:54,104 | INFO     | sum of square deviations: 380942889878.09674
[2025-11-28 11:27:49] 2025-11-28 16:26:54,303 | INFO     | sum of deviations: -178978224275.53342
[2025-11-28 11:27:49] 2025-11-28 16:26:54,304 | INFO     | mean x: 1764314105.1363213
[2025-11-28 11:27:49] 2025-11-28 16:26:54,304 | INFO     | mean y: 2902765.2502334267
[2025-11-28 11:27:49] 2025-11-28 16:26:54,304 | INFO     | intersect: 831829656.8969694
[2025-11-28 11:27:49] 2025-11-28 16:26:54,305 | INFO     | chi2: 24.456724972060094
[2025-11-28 11:27:49] 2025-11-28 16:26:54,306 | INFO     | current memory leak: -0.47 B/s (using 1071 data points, chi2=24.46)
[2025-11-28 11:27:49] 2025-11-28 16:26:54,343 | INFO     | could have reported an average CPU frequency of 2797 MHz (40 samples)
[2025-11-28 11:27:49] 2025-11-28 16:26:54,343 | INFO     | ..............................
[2025-11-28 11:27:49] 2025-11-28 16:26:54,343 | INFO     | . Timing measurements:
[2025-11-28 11:27:49] 2025-11-28 16:26:54,343 | INFO     | . get job = 0 s
[2025-11-28 11:27:49] 2025-11-28 16:26:54,344 | INFO     | . initial setup = 6 s
[2025-11-28 11:27:49] 2025-11-28 16:26:54,344 | INFO     | . payload setup = 41 s
[2025-11-28 11:27:49] 2025-11-28 16:26:54,344 | INFO     | . stage-in = 0 s
[2025-11-28 11:27:49] 2025-11-28 16:26:54,344 | INFO     | . payload execution = 66321 s
[2025-11-28 11:27:49] 2025-11-28 16:26:54,344 | INFO     | . stage-out = 16 s
[2025-11-28 11:27:49] 2025-11-28 16:26:54,344 | INFO     | . log creation = 7 s
[2025-11-28 11:27:49] 2025-11-28 16:26:54,344 | INFO     | ..............................
[2025-11-28 11:27:49] 2025-11-28 16:26:54,809 | INFO     | time since job start (66494s) is within the limit (172800.0s)
[2025-11-28 11:27:49] 2025-11-28 16:26:55,325 | INFO     | 
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | job summary report
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | --------------------------------------------------
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | PanDA job id: 6898687479
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | task id: 47556161
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | errors: (none)
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | pilot state: finished 
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | transexitcode: 0
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | exeerrorcode: 0
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | exeerrordiag: 
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | exitcode: 0
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | exitmsg: OK
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | cpuconsumptiontime: 250403 s
[2025-11-28 11:27:49] 2025-11-28 16:26:55,326 | INFO     | nevents: 1000
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | neventsw: 0
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | pid: 3258244
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | pgrp: 3258244
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | corecount: 8
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | event service: False
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | sizes: {0: 2284145, 1: 2284344, 2: 2284344, 12: 2284372, 23: 2284400, 30: 2284690, 34: 2284846, 66365: 2341018, 66366: 2341017, 66383: 2350095, 66384: 2350151, 664
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | --------------------------------------------------
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | 
[2025-11-28 11:27:49] 2025-11-28 16:26:55,327 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-28 11:27:49] 2025-11-28 16:26:55,507 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,507 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,507 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,507 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,508 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,509 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 11:27:49] 2025-11-28 16:26:55,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,509 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 11:27:49] 2025-11-28 16:26:55,509 | INFO     | job 6898687479 has completed (purged errors)
[2025-11-28 11:27:49] 2025-11-28 16:26:55,510 | INFO     | overall cleanup function is called
[2025-11-28 11:27:49] 2025-11-28 16:26:56,668 | INFO     | --- collectZombieJob: --- 10, [3258244]
[2025-11-28 11:27:49] 2025-11-28 16:26:56,669 | INFO     | zombie collector waiting for pid 3258244
[2025-11-28 11:27:49] 2025-11-28 16:26:56,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 11:27:49] 2025-11-28 16:26:56,669 | INFO     | collected zombie processes
[2025-11-28 11:27:49] 2025-11-28 16:26:56,669 | INFO     | will attempt to kill all subprocesses of pid=3258244
[2025-11-28 11:27:49] 2025-11-28 16:26:59,487 | INFO     | process IDs to be killed: [3258244] (in reverse order)
[2025-11-28 11:27:49] 2025-11-28 16:26:59,905 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 11:27:49] 2025-11-28 16:26:59,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 11:27:49] 2025-11-28 16:26:59,925 | INFO     | did not find any defunct processes belonging to 3258244
[2025-11-28 11:27:49] 2025-11-28 16:26:59,935 | INFO     | did not find any defunct processes belonging to 3258244
[2025-11-28 11:27:49] 2025-11-28 16:26:59,940 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 11:27:49] 2025-11-28 16:26:59,940 | INFO     | ready for new job
[2025-11-28 11:27:49] 2025-11-28 16:26:59,940 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 11:27:49] 2025-11-28 16:26:59,950 | INFO     | ***************************************
[2025-11-28 11:27:49] 2025-11-28 16:26:59,950 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 11:27:49] 2025-11-28 16:26:59,950 | INFO     | ***************************************
[2025-11-28 11:27:49] 2025-11-28 16:26:59,950 | INFO     | 
[2025-11-28 11:27:49] 2025-11-28 16:26:59,958 | INFO     | architecture information:
[2025-11-28 11:27:49] 2025-11-28 16:26:59,958 | INFO     | executing command: cat /etc/os-release
[2025-11-28 11:27:49] 2025-11-28 16:27:00,070 | INFO     | cat /etc/os-release:
[2025-11-28 11:27:49] NAME="CentOS Linux"
[2025-11-28 11:27:49] VERSION="7 (Core)"
[2025-11-28 11:27:49] ID="centos"
[2025-11-28 11:27:49] ID_LIKE="rhel fedora"
[2025-11-28 11:27:49] VERSION_ID="7"
[2025-11-28 11:27:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 11:27:49] ANSI_COLOR="0;31"
[2025-11-28 11:27:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 11:27:49] HOME_URL="https://www.centos.org/"
[2025-11-28 11:27:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 11:27:49] 
[2025-11-28 11:27:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 11:27:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 11:27:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 11:27:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 11:27:49] 
[2025-11-28 11:27:49] 2025-11-28 16:27:00,071 | INFO     | ***************************************
[2025-11-28 11:27:49] 2025-11-28 16:27:00,590 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-28 11:27:49] 2025-11-28 16:27:00,794 | INFO     | sufficient remaining disk space (66848817152 B)
[2025-11-28 11:27:49] 2025-11-28 16:27:00,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 11:27:49] 2025-11-28 16:27:00,794 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 11:27:49] 2025-11-28 16:27:00,794 | INFO     | update_server=False
[2025-11-28 11:27:49] 2025-11-28 16:27:00,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 11:27:49] 2025-11-28 16:27:00,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:27:49] 2025-11-28 16:27:01,032 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 11:27:49] 2025-11-28 16:27:01,033 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 11:27:49] 2025-11-28 16:27:01,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:27:49] 2025-11-28 16:27:01,033 | INFO     | will abort loop
[2025-11-28 11:27:49] 2025-11-28 16:27:01,417 | INFO     | all job control threads have been joined
[2025-11-28 11:27:49] 2025-11-28 16:27:01,484 | INFO     | all data control threads have been joined
[2025-11-28 11:27:49] 2025-11-28 16:27:01,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 11:27:49] 2025-11-28 16:27:01,648 | INFO     | all payload control threads have been joined
[2025-11-28 11:27:49] 2025-11-28 16:27:01,801 | INFO     | [job] retrieve thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:01,801 | INFO     | [job] queue monitor thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,039 | INFO     | [job] job monitor thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,183 | INFO     | [payload] validate_post thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,461 | INFO     | [job] control thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,490 | INFO     | [data] control thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,571 | INFO     | [job] validate thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,575 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,654 | INFO     | [payload] control thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:02,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 11:27:49] 2025-11-28 16:27:03,074 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:03,080 | INFO     | [data] copytool_in thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:03,087 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:03,277 | INFO     | [payload] failed_post thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:03,572 | INFO     | [data] copytool_out thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:06,953 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 11:27:49] 2025-11-28 16:27:31,962 | INFO     | PID=3249009 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 11:27:49] 2025-11-28 16:27:31,962 | INFO     | .. there are 12 such processes running
[2025-11-28 11:27:49] 2025-11-28 16:27:31,963 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 11:27:49] 2025-11-28 16:27:31,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 11:27:49] 2025-11-28 16:27:31,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 11:27:49] 2025-11-28 16:27:39,087 | INFO     | [monitor] cgroup control has ended
[2025-11-28 11:27:49] 2025-11-28 16:27:40,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139793194809152)>', '<ExcThread(monitor, started 139792687802112)>']
[2025-11-28 11:27:49] 2025-11-28 16:27:41,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 11:27:49] 2025-11-28 16:27:41,074 | INFO     | [monitor] control thread has ended
[2025-11-28 11:27:49] 2025-11-28 16:27:45,812 | INFO     | all workflow threads have been joined
[2025-11-28 11:27:49] 2025-11-28 16:27:45,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 11:27:49] 2025-11-28 16:27:45,813 | INFO     | traces error code: 0
[2025-11-28 11:27:49] 2025-11-28 16:27:45,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 11:27:49] 2025-11-28 16:27:47,362 [wrapper] ==== pilot stdout END ====
[2025-11-28 11:27:49] 2025-11-28 16:27:47,406 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 11:27:49] 2025-11-28 16:27:47,428 [wrapper] pilotpid: 3249009
[2025-11-28 11:27:49] 2025-11-28 16:27:47,464 [wrapper] Pilot exit status: 0
[2025-11-28 11:27:49] 2025-11-28 16:27:47,573 [wrapper] pandaids: 6898687479
[2025-11-28 11:27:49] 2025-11-28 16:27:48,057 [wrapper] cleanup supervisor_pilot  800494 3249010
[2025-11-28 11:27:49] 2025-11-28 16:27:48,092 [wrapper] Test setup, not cleaning
[2025-11-28 11:27:49] 2025-11-28 16:27:48,114 [wrapper] apfmon messages muted
[2025-11-28 11:27:49] 2025-11-28 16:27:48,158 [wrapper] ==== wrapper stdout END ====
[2025-11-28 11:27:49] 2025-11-28 16:27:48,218 [wrapper] ==== wrapper stderr END ====
[2025-11-28 11:27:49]  *** Error codes and diagnostics ***
[2025-11-28 11:27:49]     "exeErrorCode": 0,
[2025-11-28 11:27:49]     "exeErrorDiag": "",
[2025-11-28 11:27:49]     "pilotErrorCode": 0,
[2025-11-28 11:27:49]     "pilotErrorDiag": "",
[2025-11-28 11:27:49]  *** Listing of results directory ***
[2025-11-28 11:27:49] total 1315624
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-28 11:27:49] -rwx------. 1 boincer umatlas     36292 Nov 26 11:36 runpilot2-wrapper.sh
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:37 queuedata.json
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas       100 Nov 27 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 11:27:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 16:57 run_atlas
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas       105 Nov 27 16:57 job.xml
[2025-11-28 11:27:49] -rw-r--r--. 2 boincer umatlas 411238449 Nov 27 16:57 EVNT.47483658._002674.pool.root.1
[2025-11-28 11:27:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 16:57 start_atlas.sh
[2025-11-28 11:27:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 16:57 shared
[2025-11-28 11:27:49] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 16:57 input.tar.gz
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas         0 Nov 27 16:57 boinc_lockfile
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 16:57 pandaJob.out
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas        57 Nov 27 16:57 setup.sh.local
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas    991540 Nov 27 16:58 agis_schedconf.cvmfs.json
[2025-11-28 11:27:49] drwx------. 5 boincer umatlas      4096 Nov 27 16:58 pilot3
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas       533 Nov 28 10:28 boinc_task_state.xml
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas      6844 Nov 28 11:22 init_data.xml
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas 910100020 Nov 28 11:24 HITS.47556161._006567.pool.root.1
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas      1057 Nov 28 11:25 memory_monitor_summary.json
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas   1516240 Nov 28 11:25 agis_ddmendpoints.agis.ALL.json
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas   2225163 Nov 28 11:26 log.47556161._006567.job.log.tgz.1
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas        95 Nov 28 11:26 pilot_heartbeat.json
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas      8622 Nov 28 11:26 heartbeat.json
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas      5010 Nov 28 11:27 pilotlog.txt
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 11:27 boinc_mmap_file
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas        29 Nov 28 11:27 wrapper_checkpoint.txt
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas   8744432 Nov 28 11:27 log.47556161._006567.job.log.1
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas       353 Nov 28 11:27 output.list
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas       620 Nov 28 11:27 runtime_log
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas  10987520 Nov 28 11:27 result.tar.gz
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas      9353 Nov 28 11:27 runtime_log.err
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas       662 Nov 28 11:27 pmbMDmFgXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0ENKDmEr35Rm.diag
[2025-11-28 11:27:49] -rw-r--r--. 1 boincer umatlas     21587 Nov 28 11:27 stderr.txt
[2025-11-28 11:27:49] HITS file was successfully produced:
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas 910100020 Nov 28 11:24 shared/HITS.pool.root.1
[2025-11-28 11:27:49]  *** Contents of shared directory: ***
[2025-11-28 11:27:49] total 1301708
[2025-11-28 11:27:49] -rw-r--r--. 2 boincer umatlas 411238449 Nov 27 16:57 ATLAS.root_0
[2025-11-28 11:27:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 16:57 start_atlas.sh
[2025-11-28 11:27:49] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 16:57 input.tar.gz
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas 910100020 Nov 28 11:24 HITS.pool.root.1
[2025-11-28 11:27:49] -rw-------. 1 boincer umatlas  10987520 Nov 28 11:27 result.tar.gz
11:27:50 (3244027): run_atlas exited; CPU time 251362.341166
11:27:50 (3244027): called boinc_finish(0)

</stderr_txt>
]]>

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