Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:07:08 (21280): wrapper (7.7.26015): starting
14:07:08 (21280): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 14:07:08] Arguments: --nthreads 8
[2025-11-27 14:07:08] Threads: 8
[2025-11-27 14:07:08] Checking for CVMFS
[2025-11-27 14:07:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 14:07:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 14:07:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 14:07:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 14:07:09] 2.11.2.0 2989 75140 83148 153379 2 81 19905332 20275200 1 130560 0 21584253 99.891 3855561 29598 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 14:07:09] CVMFS is ok
[2025-11-27 14:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 14:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 14:07:09] Further information can be found at the LHC@home message board.
[2025-11-27 14:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 14:07:09] Checking for apptainer binary...
[2025-11-27 14:07:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 14:07:09] Running /usr/bin/apptainer --version
[2025-11-27 14:07:09] apptainer version 1.3.2-1.el7
[2025-11-27 14:07:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 14:07:11] c-204-24.aglt2.org
[2025-11-27 14:07:11] apptainer works
[2025-11-27 14:07:11] Set ATHENA_PROC_NUMBER=8
[2025-11-27 14:07:11] Set ATHENA_CORE_NUMBER=8
[2025-11-27 14:07:11] Starting ATLAS job with PandaID=6898413939
[2025-11-27 14:07:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 02:50:50]  *** The last 200 lines of the pilot log: ***
[2025-11-28 02:50:50] 2025-11-28 07:50:08,501 | INFO     | time since job start (45760s) is within the limit (172800.0s)
[2025-11-28 02:50:50] 2025-11-28 07:50:08,593 | INFO     | monitor loop #3368: job 0:6898413939 is in state 'finished'
[2025-11-28 02:50:50] 2025-11-28 07:50:08,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,782 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 02:50:50] 2025-11-28 07:50:09,787 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-11-28 02:50:50] 2025-11-28 07:50:09,789 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898413939/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,791 | INFO     | extracted standard info from prmon json
[2025-11-28 02:50:50] 2025-11-28 07:50:09,791 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 02:50:50] 2025-11-28 07:50:09,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 02:50:50] 2025-11-28 07:50:09,806 | INFO     | fitting pss+swap vs Time
[2025-11-28 02:50:50] 2025-11-28 07:50:09,807 | INFO     | sum of square deviations: 130816257351.89442
[2025-11-28 02:50:50] 2025-11-28 07:50:09,819 | INFO     | sum of deviations: 914746796876.358
[2025-11-28 02:50:50] 2025-11-28 07:50:09,819 | INFO     | mean x: 1764293326.0973334
[2025-11-28 02:50:50] 2025-11-28 07:50:09,819 | INFO     | mean y: 2866168.5293333335
[2025-11-28 02:50:50] 2025-11-28 07:50:09,819 | INFO     | intersect: -12334145312.058634
[2025-11-28 02:50:50] 2025-11-28 07:50:09,820 | INFO     | chi2: 5.759728978966478
[2025-11-28 02:50:50] 2025-11-28 07:50:09,821 | INFO     | sum of square deviations: 128217470842.59918
[2025-11-28 02:50:50] 2025-11-28 07:50:09,832 | INFO     | sum of deviations: 1155708003630.7222
[2025-11-28 02:50:50] 2025-11-28 07:50:09,832 | INFO     | mean x: 1764293173.6013422
[2025-11-28 02:50:50] 2025-11-28 07:50:09,832 | INFO     | mean y: 2880300.679194631
[2025-11-28 02:50:50] 2025-11-28 07:50:09,832 | INFO     | intersect: -15899849086.21708
[2025-11-28 02:50:50] 2025-11-28 07:50:09,833 | INFO     | chi2: 2.7613184027474764
[2025-11-28 02:50:50] 2025-11-28 07:50:09,833 | INFO     | current chi2=2.7613184027474764 (change=52.05818862603904 %)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,834 | INFO     | sum of square deviations: 125653336145.7781
[2025-11-28 02:50:50] 2025-11-28 07:50:09,845 | INFO     | sum of deviations: 1221483309955.988
[2025-11-28 02:50:50] 2025-11-28 07:50:09,845 | INFO     | mean x: 1764293021.1054053
[2025-11-28 02:50:50] 2025-11-28 07:50:09,846 | INFO     | mean y: 2884202.602702703
[2025-11-28 02:50:50] 2025-11-28 07:50:09,846 | INFO     | intersect: -17147909761.609041
[2025-11-28 02:50:50] 2025-11-28 07:50:09,846 | INFO     | chi2: 2.355201386611913
[2025-11-28 02:50:50] 2025-11-28 07:50:09,847 | INFO     | current chi2=2.355201386611913 (change=14.707359199557803 %)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,847 | INFO     | right removable region: 739
[2025-11-28 02:50:50] 2025-11-28 07:50:09,848 | INFO     | sum of square deviations: 128217197562.59923
[2025-11-28 02:50:50] 2025-11-28 07:50:09,859 | INFO     | sum of deviations: 715071096281.7218
[2025-11-28 02:50:50] 2025-11-28 07:50:09,859 | INFO     | mean x: 1764293478.6013422
[2025-11-28 02:50:50] 2025-11-28 07:50:09,859 | INFO     | mean y: 2877865.877852349
[2025-11-28 02:50:50] 2025-11-28 07:50:09,859 | INFO     | intersect: -9836638953.15267
[2025-11-28 02:50:50] 2025-11-28 07:50:09,860 | INFO     | chi2: 3.648107023392199
[2025-11-28 02:50:50] 2025-11-28 07:50:09,860 | INFO     | current chi2=3.648107023392199 (change=36.6618284173709 %)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,861 | INFO     | sum of square deviations: 125652880354.19482
[2025-11-28 02:50:50] 2025-11-28 07:50:09,872 | INFO     | sum of deviations: 671127574253.3525
[2025-11-28 02:50:50] 2025-11-28 07:50:09,872 | INFO     | mean x: 1764293631.1027026
[2025-11-28 02:50:50] 2025-11-28 07:50:09,872 | INFO     | mean y: 2880478.0743243243
[2025-11-28 02:50:50] 2025-11-28 07:50:09,873 | INFO     | intersect: -9420430006.929348
[2025-11-28 02:50:50] 2025-11-28 07:50:09,873 | INFO     | chi2: 3.6093898011718917
[2025-11-28 02:50:50] 2025-11-28 07:50:09,873 | INFO     | current chi2=3.6093898011718917 (change=1.0612962276612674 %)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,874 | INFO     | left removable region: 20
[2025-11-28 02:50:50] 2025-11-28 07:50:09,874 | INFO     | sum of square deviations: 115256295144.28343
[2025-11-28 02:50:50] 2025-11-28 07:50:09,885 | INFO     | sum of deviations: 891018537582.4666
[2025-11-28 02:50:50] 2025-11-28 07:50:09,885 | INFO     | mean x: 1764293600.6147428
[2025-11-28 02:50:50] 2025-11-28 07:50:09,885 | INFO     | mean y: 2903998.842837274
[2025-11-28 02:50:50] 2025-11-28 07:50:09,886 | INFO     | intersect: -13636423049.783215
[2025-11-28 02:50:50] 2025-11-28 07:50:09,886 | INFO     | chi2: 0.1283877910283464
[2025-11-28 02:50:50] 2025-11-28 07:50:09,887 | INFO     | current memory leak: 7.73 B/s (using 719 data points, chi2=0.13)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,887 | INFO     | could have reported an average CPU frequency of 2160 MHz (29 samples)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,887 | INFO     | ..............................
[2025-11-28 02:50:50] 2025-11-28 07:50:09,887 | INFO     | . Timing measurements:
[2025-11-28 02:50:50] 2025-11-28 07:50:09,888 | INFO     | . get job = 0 s
[2025-11-28 02:50:50] 2025-11-28 07:50:09,888 | INFO     | . initial setup = 2 s
[2025-11-28 02:50:50] 2025-11-28 07:50:09,888 | INFO     | . payload setup = 9 s
[2025-11-28 02:50:50] 2025-11-28 07:50:09,888 | INFO     | . stage-in = 0 s
[2025-11-28 02:50:50] 2025-11-28 07:50:09,888 | INFO     | . payload execution = 45719 s
[2025-11-28 02:50:50] 2025-11-28 07:50:09,888 | INFO     | . stage-out = 3 s
[2025-11-28 02:50:50] 2025-11-28 07:50:09,888 | INFO     | . log creation = 0 s
[2025-11-28 02:50:50] 2025-11-28 07:50:09,888 | INFO     | ..............................
[2025-11-28 02:50:50] 2025-11-28 07:50:09,983 | INFO     | 
[2025-11-28 02:50:50] 2025-11-28 07:50:09,983 | INFO     | job summary report
[2025-11-28 02:50:50] 2025-11-28 07:50:09,984 | INFO     | --------------------------------------------------
[2025-11-28 02:50:50] 2025-11-28 07:50:09,984 | INFO     | PanDA job id: 6898413939
[2025-11-28 02:50:50] 2025-11-28 07:50:09,984 | INFO     | task id: 47556161
[2025-11-28 02:50:50] 2025-11-28 07:50:09,984 | INFO     | errors: (none)
[2025-11-28 02:50:50] 2025-11-28 07:50:09,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 02:50:50] 2025-11-28 07:50:09,984 | INFO     | pilot state: finished 
[2025-11-28 02:50:50] 2025-11-28 07:50:09,985 | INFO     | transexitcode: 0
[2025-11-28 02:50:50] 2025-11-28 07:50:09,985 | INFO     | exeerrorcode: 0
[2025-11-28 02:50:50] 2025-11-28 07:50:09,985 | INFO     | exeerrordiag: 
[2025-11-28 02:50:50] 2025-11-28 07:50:09,985 | INFO     | exitcode: 0
[2025-11-28 02:50:50] 2025-11-28 07:50:09,985 | INFO     | exitmsg: OK
[2025-11-28 02:50:50] 2025-11-28 07:50:09,985 | INFO     | cpuconsumptiontime: 352001 s
[2025-11-28 02:50:50] 2025-11-28 07:50:09,986 | INFO     | nevents: 1000
[2025-11-28 02:50:50] 2025-11-28 07:50:09,986 | INFO     | neventsw: 0
[2025-11-28 02:50:50] 2025-11-28 07:50:09,986 | INFO     | pid: 31420
[2025-11-28 02:50:50] 2025-11-28 07:50:09,986 | INFO     | pgrp: 31420
[2025-11-28 02:50:50] 2025-11-28 07:50:09,986 | INFO     | corecount: 8
[2025-11-28 02:50:50] 2025-11-28 07:50:09,986 | INFO     | event service: False
[2025-11-28 02:50:50] 2025-11-28 07:50:09,987 | INFO     | sizes: {0: 2284145, 1: 2284344, 6: 2284606, 11: 2284634, 45732: 2330864, 45736: 2340042, 45744: 2340232}
[2025-11-28 02:50:50] 2025-11-28 07:50:09,987 | INFO     | --------------------------------------------------
[2025-11-28 02:50:50] 2025-11-28 07:50:09,987 | INFO     | 
[2025-11-28 02:50:50] 2025-11-28 07:50:09,987 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 02:50:50] 2025-11-28 07:50:10,022 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,022 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,024 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,025 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 02:50:50] 2025-11-28 07:50:10,025 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,025 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 02:50:50] 2025-11-28 07:50:10,026 | INFO     | job 6898413939 has completed (purged errors)
[2025-11-28 02:50:50] 2025-11-28 07:50:10,026 | INFO     | overall cleanup function is called
[2025-11-28 02:50:50] 2025-11-28 07:50:11,042 | INFO     | --- collectZombieJob: --- 10, [31420]
[2025-11-28 02:50:50] 2025-11-28 07:50:11,043 | INFO     | zombie collector waiting for pid 31420
[2025-11-28 02:50:50] 2025-11-28 07:50:11,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 02:50:50] 2025-11-28 07:50:11,044 | INFO     | collected zombie processes
[2025-11-28 02:50:50] 2025-11-28 07:50:11,044 | INFO     | will attempt to kill all subprocesses of pid=31420
[2025-11-28 02:50:50] 2025-11-28 07:50:11,142 | INFO     | process IDs to be killed: [31420] (in reverse order)
[2025-11-28 02:50:50] 2025-11-28 07:50:11,202 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 02:50:50] 2025-11-28 07:50:11,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 02:50:50] 2025-11-28 07:50:11,207 | INFO     | did not find any defunct processes belonging to 31420
[2025-11-28 02:50:50] 2025-11-28 07:50:11,211 | INFO     | did not find any defunct processes belonging to 31420
[2025-11-28 02:50:50] 2025-11-28 07:50:11,214 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 02:50:50] 2025-11-28 07:50:11,214 | INFO     | ready for new job
[2025-11-28 02:50:50] 2025-11-28 07:50:11,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 02:50:50] 2025-11-28 07:50:11,218 | INFO     | ***************************************
[2025-11-28 02:50:50] 2025-11-28 07:50:11,218 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 02:50:50] 2025-11-28 07:50:11,219 | INFO     | ***************************************
[2025-11-28 02:50:50] 2025-11-28 07:50:11,222 | INFO     | 
[2025-11-28 02:50:50] 2025-11-28 07:50:11,223 | INFO     | architecture information:
[2025-11-28 02:50:50] 2025-11-28 07:50:11,225 | INFO     | executing command: cat /etc/os-release
[2025-11-28 02:50:50] 2025-11-28 07:50:11,247 | INFO     | cat /etc/os-release:
[2025-11-28 02:50:50] NAME="CentOS Linux"
[2025-11-28 02:50:50] VERSION="7 (Core)"
[2025-11-28 02:50:50] ID="centos"
[2025-11-28 02:50:50] ID_LIKE="rhel fedora"
[2025-11-28 02:50:50] VERSION_ID="7"
[2025-11-28 02:50:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 02:50:50] ANSI_COLOR="0;31"
[2025-11-28 02:50:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 02:50:50] HOME_URL="https://www.centos.org/"
[2025-11-28 02:50:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 02:50:50] 
[2025-11-28 02:50:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 02:50:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 02:50:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 02:50:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 02:50:50] 
[2025-11-28 02:50:50] 2025-11-28 07:50:11,247 | INFO     | ***************************************
[2025-11-28 02:50:50] 2025-11-28 07:50:11,751 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 02:50:50] 2025-11-28 07:50:11,773 | INFO     | sufficient remaining disk space (17588813824 B)
[2025-11-28 02:50:50] 2025-11-28 07:50:11,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 02:50:50] 2025-11-28 07:50:11,774 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 02:50:50] 2025-11-28 07:50:11,774 | INFO     | update_server=False
[2025-11-28 02:50:50] 2025-11-28 07:50:11,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 02:50:50] 2025-11-28 07:50:11,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:50:50] 2025-11-28 07:50:12,096 | INFO     | all data control threads have been joined
[2025-11-28 02:50:50] 2025-11-28 07:50:12,099 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:50:50] 2025-11-28 07:50:12,099 | INFO     | aborting loop
[2025-11-28 02:50:50] 2025-11-28 07:50:12,125 | INFO     | all payload control threads have been joined
[2025-11-28 02:50:50] 2025-11-28 07:50:12,292 | INFO     | all job control threads have been joined
[2025-11-28 02:50:50] 2025-11-28 07:50:12,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 02:50:50] 2025-11-28 07:50:12,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 02:50:50] 2025-11-28 07:50:12,780 | INFO     | [job] retrieve thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:12,781 | INFO     | [job] queue monitor thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,102 | INFO     | [data] control thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,104 | INFO     | [job] job monitor thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,126 | INFO     | [payload] control thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,297 | INFO     | [job] control thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,403 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,470 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,522 | INFO     | [payload] validate_post thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,720 | INFO     | [job] validate thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:13,868 | INFO     | [data] copytool_in thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:14,029 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:14,166 | INFO     | [payload] failed_post thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:14,516 | INFO     | [data] copytool_out thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:16,613 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:22,473 | INFO     | job.realtimelogging is not enabled
[2025-11-28 02:50:50] 2025-11-28 07:50:23,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 02:50:50] 2025-11-28 07:50:41,720 | INFO     | PID=25047 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 02:50:50] 2025-11-28 07:50:41,721 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 02:50:50] 2025-11-28 07:50:41,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 02:50:50] 2025-11-28 07:50:41,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 02:50:50] 2025-11-28 07:50:43,929 | INFO     | [monitor] cgroup control has ended
[2025-11-28 02:50:50] 2025-11-28 07:50:45,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674665793344)>', '<ExcThread(monitor, started 139673997399808)>']
[2025-11-28 02:50:50] 2025-11-28 07:50:45,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 02:50:50] 2025-11-28 07:50:45,736 | INFO     | [monitor] control thread has ended
[2025-11-28 02:50:50] 2025-11-28 07:50:50,487 | INFO     | all workflow threads have been joined
[2025-11-28 02:50:50] 2025-11-28 07:50:50,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 02:50:50] 2025-11-28 07:50:50,488 | INFO     | traces error code: 0
[2025-11-28 02:50:50] 2025-11-28 07:50:50,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 02:50:50] 2025-11-28 07:50:50,608 [wrapper] ==== pilot stdout END ====
[2025-11-28 02:50:50] 2025-11-28 07:50:50,613 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 02:50:50] 2025-11-28 07:50:50,619 [wrapper] pilotpid: 25047
[2025-11-28 02:50:50] 2025-11-28 07:50:50,625 [wrapper] Pilot exit status: 0
[2025-11-28 02:50:50] 2025-11-28 07:50:50,647 [wrapper] pandaids: 6898413939
[2025-11-28 02:50:50] 2025-11-28 07:50:50,697 [wrapper] cleanup supervisor_pilot 26360 25048
[2025-11-28 02:50:50] 2025-11-28 07:50:50,703 [wrapper] Test setup, not cleaning
[2025-11-28 02:50:50] 2025-11-28 07:50:50,707 [wrapper] apfmon messages muted
[2025-11-28 02:50:50] 2025-11-28 07:50:50,712 [wrapper] ==== wrapper stdout END ====
[2025-11-28 02:50:50] 2025-11-28 07:50:50,716 [wrapper] ==== wrapper stderr END ====
[2025-11-28 02:50:50]  *** Error codes and diagnostics ***
[2025-11-28 02:50:50]     "exeErrorCode": 0,
[2025-11-28 02:50:50]     "exeErrorDiag": "",
[2025-11-28 02:50:50]     "pilotErrorCode": 0,
[2025-11-28 02:50:50]     "pilotErrorDiag": "",
[2025-11-28 02:50:50]  *** Listing of results directory ***
[2025-11-28 02:50:50] total 1320648
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:35 queuedata.json
[2025-11-28 02:50:50] -rwx------ 1 boincer umatlas     36292 Nov 26 11:36 runpilot2-wrapper.sh
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas       100 Nov 27 14:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 02:50:50] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 14:07 run_atlas
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas       105 Nov 27 14:07 job.xml
[2025-11-28 02:50:50] -rw-r--r-- 2 boincer umatlas 410918431 Nov 27 14:07 EVNT.47483658._002631.pool.root.1
[2025-11-28 02:50:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 14:07 start_atlas.sh
[2025-11-28 02:50:50] drwxrwx--x 2 boincer umatlas      4096 Nov 27 14:07 shared
[2025-11-28 02:50:50] -rw-r--r-- 2 boincer umatlas    590112 Nov 27 14:07 input.tar.gz
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas         0 Nov 27 14:07 boinc_lockfile
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas      2787 Nov 27 14:07 pandaJob.out
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas        57 Nov 27 14:07 setup.sh.local
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas    991223 Nov 27 14:07 agis_schedconf.cvmfs.json
[2025-11-28 02:50:50] drwx------ 5 boincer umatlas      4096 Nov 27 14:07 pilot3
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas       532 Nov 28 02:39 boinc_task_state.xml
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas 920918060 Nov 28 02:49 HITS.47556161._006140.pool.root.1
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas      5913 Nov 28 02:49 init_data.xml
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas        95 Nov 28 02:49 pilot_heartbeat.json
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas      1062 Nov 28 02:49 memory_monitor_summary.json
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas   1516240 Nov 28 02:50 agis_ddmendpoints.agis.ALL.json
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas   1997012 Nov 28 02:50 log.47556161._006140.job.log.tgz.1
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas      8657 Nov 28 02:50 heartbeat.json
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 02:50 boinc_mmap_file
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas        29 Nov 28 02:50 wrapper_checkpoint.txt
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas      4818 Nov 28 02:50 pilotlog.txt
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas   6301638 Nov 28 02:50 log.47556161._006140.job.log.1
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas       353 Nov 28 02:50 output.list
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas       620 Nov 28 02:50 runtime_log
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas   8314880 Nov 28 02:50 result.tar.gz
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas       668 Nov 28 02:50 tsDMDmzfXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDml4JKDmZfrIFn.diag
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas      9343 Nov 28 02:50 runtime_log.err
[2025-11-28 02:50:50] -rw-r--r-- 1 boincer umatlas     21270 Nov 28 02:50 stderr.txt
[2025-11-28 02:50:50] HITS file was successfully produced:
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas 920918060 Nov 28 02:49 shared/HITS.pool.root.1
[2025-11-28 02:50:50]  *** Contents of shared directory: ***
[2025-11-28 02:50:50] total 1309344
[2025-11-28 02:50:50] -rw-r--r-- 2 boincer umatlas 410918431 Nov 27 14:07 ATLAS.root_0
[2025-11-28 02:50:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 14:07 start_atlas.sh
[2025-11-28 02:50:50] -rw-r--r-- 2 boincer umatlas    590112 Nov 27 14:07 input.tar.gz
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas 920918060 Nov 28 02:49 HITS.pool.root.1
[2025-11-28 02:50:50] -rw------- 1 boincer umatlas   8314880 Nov 28 02:50 result.tar.gz
02:50:52 (21280): run_atlas exited; CPU time 348008.399423
02:50:52 (21280): called boinc_finish(0)

</stderr_txt>
]]>

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