Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:44:53 (1200876): wrapper (7.7.26015): starting
13:44:53 (1200876): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 13:44:53] Arguments: --nthreads 8
[2025-11-27 13:44:53] Threads: 8
[2025-11-27 13:44:53] Checking for CVMFS
[2025-11-27 13:44:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 13:44:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 13:44:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 13:44:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 13:44:53] 2.13.3.0 9702 31869 342156 153379 1 597 30109347 32935936 24794 16776704 0 165633026 99.693 120456268 32075 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 13:44:53] CVMFS is ok
[2025-11-27 13:44:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 13:44:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 13:44:53] Further information can be found at the LHC@home message board.
[2025-11-27 13:44:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 13:44:53] Checking for apptainer binary...
[2025-11-27 13:44:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 13:44:53] Running /usr/bin/apptainer --version
[2025-11-27 13:44:53] apptainer version 1.4.4-1.el9
[2025-11-27 13:44:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 13:44:54] c-4-37.aglt2.org
[2025-11-27 13:44:54] apptainer works
[2025-11-27 13:44:54] Set ATHENA_PROC_NUMBER=8
[2025-11-27 13:44:54] Set ATHENA_CORE_NUMBER=8
[2025-11-27 13:44:54] Starting ATLAS job with PandaID=6894252828
[2025-11-27 13:44:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:30:19]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:30:19] 2025-11-28 03:29:38,544 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.842175
[2025-11-27 22:30:19] 2025-11-28 03:29:38,560 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894252828/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:30:19] 2025-11-28 03:29:38,561 | INFO     | extracted standard info from prmon json
[2025-11-27 22:30:19] 2025-11-28 03:29:38,561 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:30:19] 2025-11-28 03:29:38,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:30:19] 2025-11-28 03:29:38,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 22:30:19] 2025-11-28 03:29:38,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 22:30:19] 2025-11-28 03:29:38,572 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:30:19] 2025-11-28 03:29:38,573 | INFO     | sum of square deviations: 42354199185.5028
[2025-11-27 22:30:19] 2025-11-28 03:29:38,580 | INFO     | sum of deviations: -22156644610.671837
[2025-11-27 22:30:19] 2025-11-28 03:29:38,580 | INFO     | mean x: 1764284832.231068
[2025-11-27 22:30:19] 2025-11-28 03:29:38,581 | INFO     | mean y: 2623882.366990291
[2025-11-27 22:30:19] 2025-11-28 03:29:38,581 | INFO     | intersect: 925569724.1366227
[2025-11-27 22:30:19] 2025-11-28 03:29:38,582 | INFO     | chi2: 2.464067788033523
[2025-11-27 22:30:19] 2025-11-28 03:29:38,583 | INFO     | sum of square deviations: 41132547457.73325
[2025-11-27 22:30:19] 2025-11-28 03:29:38,589 | INFO     | sum of deviations: 11556119254.200024
[2025-11-27 22:30:19] 2025-11-28 03:29:38,590 | INFO     | mean x: 1764284679.7333333
[2025-11-27 22:30:19] 2025-11-28 03:29:38,590 | INFO     | mean y: 2628057.494117647
[2025-11-27 22:30:19] 2025-11-28 03:29:38,590 | INFO     | intersect: -493044722.7611528
[2025-11-27 22:30:19] 2025-11-28 03:29:38,591 | INFO     | chi2: 1.7822100975205073
[2025-11-27 22:30:19] 2025-11-28 03:29:38,591 | INFO     | current chi2=1.7822100975205073 (change=27.67203458542753 %)
[2025-11-27 22:30:19] 2025-11-28 03:29:38,593 | INFO     | sum of square deviations: 39934617104.95843
[2025-11-27 22:30:19] 2025-11-28 03:29:38,599 | INFO     | sum of deviations: 12854527525.621752
[2025-11-27 22:30:19] 2025-11-28 03:29:38,600 | INFO     | mean x: 1764284527.2356436
[2025-11-27 22:30:19] 2025-11-28 03:29:38,600 | INFO     | mean y: 2628222.80990099
[2025-11-27 22:30:19] 2025-11-28 03:29:38,600 | INFO     | intersect: -565276158.4634386
[2025-11-27 22:30:19] 2025-11-28 03:29:38,601 | INFO     | chi2: 1.7824311656697875
[2025-11-27 22:30:19] 2025-11-28 03:29:38,601 | INFO     | current chi2=1.7824311656697875 (change=-0.012404157601160825 %)
[2025-11-27 22:30:19] 2025-11-28 03:29:38,601 | INFO     | right removable region: 504
[2025-11-27 22:30:19] 2025-11-28 03:29:38,602 | INFO     | sum of square deviations: 41132474867.73328
[2025-11-27 22:30:19] 2025-11-28 03:29:38,609 | INFO     | sum of deviations: -104519543709.20012
[2025-11-27 22:30:19] 2025-11-28 03:29:38,609 | INFO     | mean x: 1764284984.7333333
[2025-11-27 22:30:19] 2025-11-28 03:29:38,610 | INFO     | mean y: 2634118.3882352943
[2025-11-27 22:30:19] 2025-11-28 03:29:38,610 | INFO     | intersect: 4485764836.155403
[2025-11-27 22:30:19] 2025-11-28 03:29:38,610 | INFO     | chi2: 1.0314872026095714
[2025-11-27 22:30:19] 2025-11-28 03:29:38,611 | INFO     | current chi2=1.0314872026095714 (change=58.1388463572765 %)
[2025-11-27 22:30:19] 2025-11-28 03:29:38,611 | INFO     | sum of square deviations: 39934471924.958405
[2025-11-27 22:30:19] 2025-11-28 03:29:38,618 | INFO     | sum of deviations: -105862938370.98416
[2025-11-27 22:30:19] 2025-11-28 03:29:38,618 | INFO     | mean x: 1764285137.2356436
[2025-11-27 22:30:19] 2025-11-28 03:29:38,619 | INFO     | mean y: 2634289.2435643566
[2025-11-27 22:30:19] 2025-11-28 03:29:38,619 | INFO     | intersect: 4679606332.419389
[2025-11-27 22:30:19] 2025-11-28 03:29:38,619 | INFO     | chi2: 1.0292982947897469
[2025-11-27 22:30:19] 2025-11-28 03:29:38,620 | INFO     | current chi2=1.0292982947897469 (change=0.21220891682289036 %)
[2025-11-27 22:30:19] 2025-11-28 03:29:38,620 | INFO     | left removable region: 20
[2025-11-27 22:30:19] 2025-11-28 03:29:38,620 | INFO     | sum of square deviations: 35156808207.74188
[2025-11-27 22:30:19] 2025-11-28 03:29:38,627 | INFO     | sum of deviations: -30599512192.805767
[2025-11-27 22:30:19] 2025-11-28 03:29:38,627 | INFO     | mean x: 1764285106.7458677
[2025-11-27 22:30:19] 2025-11-28 03:29:38,627 | INFO     | mean y: 2633513.847107438
[2025-11-27 22:30:19] 2025-11-28 03:29:38,627 | INFO     | intersect: 1538218408.7115817
[2025-11-27 22:30:19] 2025-11-28 03:29:38,628 | INFO     | chi2: 0.24463431593714263
[2025-11-27 22:30:19] 2025-11-28 03:29:38,629 | INFO     | current memory leak: -0.87 B/s (using 484 data points, chi2=0.24)
[2025-11-27 22:30:19] 2025-11-28 03:29:38,629 | INFO     | could have reported an average CPU frequency of 2599 MHz (21 samples)
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | ..............................
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | . Timing measurements:
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | . get job = 0 s
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | . initial setup = 3 s
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | . payload setup = 9 s
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | . stage-in = 0 s
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | . payload execution = 31415 s
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | . stage-out = 2 s
[2025-11-27 22:30:19] 2025-11-28 03:29:38,630 | INFO     | . log creation = 0 s
[2025-11-27 22:30:19] 2025-11-28 03:29:38,631 | INFO     | ..............................
[2025-11-27 22:30:19] 2025-11-28 03:29:39,428 | INFO     | 
[2025-11-27 22:30:19] 2025-11-28 03:29:39,428 | INFO     | job summary report
[2025-11-27 22:30:19] 2025-11-28 03:29:39,428 | INFO     | --------------------------------------------------
[2025-11-27 22:30:19] 2025-11-28 03:29:39,428 | INFO     | PanDA job id: 6894252828
[2025-11-27 22:30:19] 2025-11-28 03:29:39,428 | INFO     | task id: 47523626
[2025-11-27 22:30:19] 2025-11-28 03:29:39,428 | INFO     | errors: (none)
[2025-11-27 22:30:19] 2025-11-28 03:29:39,429 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:30:19] 2025-11-28 03:29:39,429 | INFO     | pilot state: finished 
[2025-11-27 22:30:19] 2025-11-28 03:29:39,429 | INFO     | transexitcode: 0
[2025-11-27 22:30:19] 2025-11-28 03:29:39,429 | INFO     | exeerrorcode: 0
[2025-11-27 22:30:19] 2025-11-28 03:29:39,429 | INFO     | exeerrordiag: 
[2025-11-27 22:30:19] 2025-11-28 03:29:39,429 | INFO     | exitcode: 0
[2025-11-27 22:30:19] 2025-11-28 03:29:39,449 | INFO     | exitmsg: OK
[2025-11-27 22:30:19] 2025-11-28 03:29:39,449 | INFO     | cpuconsumptiontime: 113375 s
[2025-11-27 22:30:19] 2025-11-28 03:29:39,449 | INFO     | nevents: 400
[2025-11-27 22:30:19] 2025-11-28 03:29:39,449 | INFO     | neventsw: 0
[2025-11-27 22:30:19] 2025-11-28 03:29:39,449 | INFO     | pid: 1220097
[2025-11-27 22:30:19] 2025-11-28 03:29:39,449 | INFO     | pgrp: 1220097
[2025-11-27 22:30:19] 2025-11-28 03:29:39,450 | INFO     | corecount: 8
[2025-11-27 22:30:19] 2025-11-28 03:29:39,450 | INFO     | event service: False
[2025-11-27 22:30:19] 2025-11-28 03:29:39,450 | INFO     | sizes: {0: 2283717, 1: 2283801, 2: 2284000, 10: 2284262, 13: 2284290, 31425: 2323057, 31430: 2332111, 31442: 2332249}
[2025-11-27 22:30:19] 2025-11-28 03:29:39,450 | INFO     | --------------------------------------------------
[2025-11-27 22:30:19] 2025-11-28 03:29:39,450 | INFO     | 
[2025-11-27 22:30:19] 2025-11-28 03:29:39,450 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 22:30:19] 2025-11-28 03:29:39,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,490 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:30:19] 2025-11-28 03:29:39,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,492 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:30:19] 2025-11-28 03:29:39,492 | INFO     | job 6894252828 has completed (purged errors)
[2025-11-27 22:30:19] 2025-11-28 03:29:39,492 | INFO     | overall cleanup function is called
[2025-11-27 22:30:19] 2025-11-28 03:29:40,508 | INFO     | --- collectZombieJob: --- 10, [1220097]
[2025-11-27 22:30:19] 2025-11-28 03:29:40,508 | INFO     | zombie collector waiting for pid 1220097
[2025-11-27 22:30:19] 2025-11-28 03:29:40,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:30:19] 2025-11-28 03:29:40,508 | INFO     | collected zombie processes
[2025-11-27 22:30:19] 2025-11-28 03:29:40,508 | INFO     | will attempt to kill all subprocesses of pid=1220097
[2025-11-27 22:30:19] 2025-11-28 03:29:41,082 | INFO     | process IDs to be killed: [1220097] (in reverse order)
[2025-11-27 22:30:19] 2025-11-28 03:29:41,350 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:30:19] 2025-11-28 03:29:41,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:30:19] 2025-11-28 03:29:41,382 | INFO     | did not find any defunct processes belonging to 1220097
[2025-11-27 22:30:19] 2025-11-28 03:29:41,429 | INFO     | did not find any defunct processes belonging to 1220097
[2025-11-27 22:30:19] 2025-11-28 03:29:41,453 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:30:19] 2025-11-28 03:29:41,453 | INFO     | ready for new job
[2025-11-27 22:30:19] 2025-11-28 03:29:41,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:30:19] 2025-11-28 03:29:41,457 | INFO     | ***************************************
[2025-11-27 22:30:19] 2025-11-28 03:29:41,457 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:30:19] 2025-11-28 03:29:41,457 | INFO     | ***************************************
[2025-11-27 22:30:19] 2025-11-28 03:29:41,457 | INFO     | 
[2025-11-27 22:30:19] 2025-11-28 03:29:41,459 | INFO     | architecture information:
[2025-11-27 22:30:19] 2025-11-28 03:29:41,460 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:30:19] 2025-11-28 03:29:41,479 | INFO     | cat /etc/os-release:
[2025-11-27 22:30:19] NAME="CentOS Linux"
[2025-11-27 22:30:19] VERSION="7 (Core)"
[2025-11-27 22:30:19] ID="centos"
[2025-11-27 22:30:19] ID_LIKE="rhel fedora"
[2025-11-27 22:30:19] VERSION_ID="7"
[2025-11-27 22:30:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:30:19] ANSI_COLOR="0;31"
[2025-11-27 22:30:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:30:19] HOME_URL="https://www.centos.org/"
[2025-11-27 22:30:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:30:19] 
[2025-11-27 22:30:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:30:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:30:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:30:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:30:19] 
[2025-11-27 22:30:19] 2025-11-28 03:29:41,480 | INFO     | ***************************************
[2025-11-27 22:30:19] 2025-11-28 03:29:41,983 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 22:30:19] 2025-11-28 03:29:42,013 | INFO     | sufficient remaining disk space (74546413568 B)
[2025-11-27 22:30:19] 2025-11-28 03:29:42,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:30:19] 2025-11-28 03:29:42,015 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:30:19] 2025-11-28 03:29:42,015 | INFO     | update_server=False
[2025-11-27 22:30:19] 2025-11-28 03:29:42,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:30:19] 2025-11-28 03:29:42,263 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:30:19] 2025-11-28 03:29:42,267 | INFO     | all job control threads have been joined
[2025-11-27 22:30:19] 2025-11-28 03:29:42,283 | INFO     | all data control threads have been joined
[2025-11-27 22:30:19] 2025-11-28 03:29:42,361 | INFO     | all payload control threads have been joined
[2025-11-27 22:30:19] 2025-11-28 03:29:42,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:30:19] 2025-11-28 03:29:42,431 | INFO     | aborting loop
[2025-11-27 22:30:19] 2025-11-28 03:29:42,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:30:19] 2025-11-28 03:29:43,021 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:43,028 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:43,288 | INFO     | [job] control thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:43,289 | INFO     | [data] control thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:43,366 | INFO     | [payload] control thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:43,436 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:43,697 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:43,898 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:43,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:30:19] 2025-11-28 03:29:44,052 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:44,317 | INFO     | [job] validate thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:44,402 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:44,523 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:44,608 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:44,958 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:46,280 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:29:52,230 | INFO     | job.realtimelogging is not enabled
[2025-11-27 22:30:19] 2025-11-28 03:29:53,235 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:30:19] 2025-11-28 03:30:12,014 | INFO     | PID=1210244 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 22:30:19] 2025-11-28 03:30:12,014 | INFO     | .. there are 42 such processes running
[2025-11-27 22:30:19] 2025-11-28 03:30:12,015 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:30:19] 2025-11-28 03:30:12,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:30:19] 2025-11-28 03:30:12,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:30:19] 2025-11-28 03:30:12,687 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:30:19] 2025-11-28 03:30:13,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766566819648)>', '<ExcThread(monitor, started 139765919758080)>']
[2025-11-27 22:30:19] 2025-11-28 03:30:14,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:30:19] 2025-11-28 03:30:14,035 | INFO     | [monitor] control thread has ended
[2025-11-27 22:30:19] 2025-11-28 03:30:16,529 [wrapper] supervise_pilot (15 min periods counter: 36)
[2025-11-27 22:30:19] 2025-11-28 03:30:18,948 | INFO     | all workflow threads have been joined
[2025-11-27 22:30:19] 2025-11-28 03:30:18,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:30:19] 2025-11-28 03:30:18,948 | INFO     | traces error code: 0
[2025-11-27 22:30:19] 2025-11-28 03:30:18,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:30:19] 2025-11-28 03:30:19,419 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:30:19] 2025-11-28 03:30:19,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:30:19] 2025-11-28 03:30:19,424 [wrapper] pilotpid: 1210244
[2025-11-27 22:30:19] 2025-11-28 03:30:19,427 [wrapper] Pilot exit status: 0
[2025-11-27 22:30:19] 2025-11-28 03:30:19,441 [wrapper] pandaids: 6894252828
[2025-11-27 22:30:19] 2025-11-28 03:30:19,518 [wrapper] cleanup supervisor_pilot 2719431 1210245
[2025-11-27 22:30:19] 2025-11-28 03:30:19,528 [wrapper] Test setup, not cleaning
[2025-11-27 22:30:19] 2025-11-28 03:30:19,531 [wrapper] apfmon messages muted
[2025-11-27 22:30:19] 2025-11-28 03:30:19,534 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:30:19] 2025-11-28 03:30:19,537 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:30:19]  *** Error codes and diagnostics ***
[2025-11-27 22:30:19]     "exeErrorCode": 0,
[2025-11-27 22:30:19]     "exeErrorDiag": "",
[2025-11-27 22:30:19]     "pilotErrorCode": 0,
[2025-11-27 22:30:19]     "pilotErrorDiag": "",
[2025-11-27 22:30:19]  *** Listing of results directory ***
[2025-11-27 22:30:19] total 628608
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-27 22:30:19] -rwx------. 1 boincer umatlas     36292 Nov 26 20:29 runpilot2-wrapper.sh
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 20:31 queuedata.json
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas       100 Nov 27 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:30:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 13:44 run_atlas
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas       105 Nov 27 13:44 job.xml
[2025-11-27 22:30:19] -rw-r--r--. 2 boincer umatlas 302545017 Nov 27 13:44 EVNT.47523624._000001.pool.root.1
[2025-11-27 22:30:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 13:44 start_atlas.sh
[2025-11-27 22:30:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 13:44 shared
[2025-11-27 22:30:19] -rw-r--r--. 2 boincer umatlas    589955 Nov 27 13:44 input.tar.gz
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas         0 Nov 27 13:44 boinc_lockfile
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas      2608 Nov 27 13:44 pandaJob.out
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas        57 Nov 27 13:44 setup.sh.local
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas    991223 Nov 27 13:45 agis_schedconf.cvmfs.json
[2025-11-27 22:30:19] drwx------. 5 boincer umatlas      4096 Nov 27 13:45 pilot3
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 22:27 init_data.xml
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas 327959957 Nov 27 22:28 HITS.47523626._000050.pool.root.1
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas       532 Nov 27 22:28 boinc_task_state.xml
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas      1045 Nov 27 22:29 memory_monitor_summary.json
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas   1516240 Nov 27 22:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas    692556 Nov 27 22:29 log.47523626._000050.job.log.tgz.1
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas      7816 Nov 27 22:29 heartbeat.json
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas        95 Nov 27 22:30 pilot_heartbeat.json
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 22:30 boinc_mmap_file
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas      4896 Nov 27 22:30 pilotlog.txt
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas        29 Nov 27 22:30 wrapper_checkpoint.txt
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas   3943947 Nov 27 22:30 log.47523626._000050.job.log.1
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas       357 Nov 27 22:30 output.list
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas       620 Nov 27 22:30 runtime_log
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas   4659200 Nov 27 22:30 result.tar.gz
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 22:30 runtime_log.err
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas       658 Nov 27 22:30 C7KKDmxzfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUfNKDmXAUIKn.diag
[2025-11-27 22:30:19] -rw-r--r--. 1 boincer umatlas     21259 Nov 27 22:30 stderr.txt
[2025-11-27 22:30:19] HITS file was successfully produced:
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas 327959957 Nov 27 22:28 shared/HITS.pool.root.1
[2025-11-27 22:30:19]  *** Contents of shared directory: ***
[2025-11-27 22:30:19] total 620884
[2025-11-27 22:30:19] -rw-r--r--. 2 boincer umatlas 302545017 Nov 27 13:44 ATLAS.root_0
[2025-11-27 22:30:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 13:44 start_atlas.sh
[2025-11-27 22:30:19] -rw-r--r--. 2 boincer umatlas    589955 Nov 27 13:44 input.tar.gz
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas 327959957 Nov 27 22:28 HITS.pool.root.1
[2025-11-27 22:30:19] -rw-------. 1 boincer umatlas   4659200 Nov 27 22:30 result.tar.gz
22:30:21 (1200876): run_atlas exited; CPU time 114730.533698
22:30:21 (1200876): called boinc_finish(0)

</stderr_txt>
]]>

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