Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:28:39 (25625): wrapper (7.7.26015): starting
12:28:39 (25625): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 12:28:39] Arguments: --nthreads 8
[2025-11-27 12:28:39] Threads: 8
[2025-11-27 12:28:39] Checking for CVMFS
[2025-11-27 12:28:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 12:28:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 12:28:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 12:28:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 12:28:39] 2.11.2.0 1598 282743 114092 153377 3 82 10674883 20275201 943 130560 1 266010618 99.981 15779594 13296 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 12:28:39] CVMFS is ok
[2025-11-27 12:28:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 12:28:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 12:28:39] Further information can be found at the LHC@home message board.
[2025-11-27 12:28:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 12:28:39] Checking for apptainer binary...
[2025-11-27 12:28:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 12:28:39] Running /usr/bin/apptainer --version
[2025-11-27 12:28:39] apptainer version 1.3.2-1.el7
[2025-11-27 12:28:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 12:28:40] c-205-36.aglt2.org
[2025-11-27 12:28:40] apptainer works
[2025-11-27 12:28:40] Set ATHENA_PROC_NUMBER=8
[2025-11-27 12:28:40] Set ATHENA_CORE_NUMBER=8
[2025-11-27 12:28:40] Starting ATLAS job with PandaID=6894252801
[2025-11-27 12:28:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:04:23]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:04:23] 2025-11-27 20:03:46,041 | INFO     | executing command: lscpu
[2025-11-27 15:04:23] 2025-11-27 20:03:46,072 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 15:04:23] 2025-11-27 20:03:47,654 | INFO     | time since job start (9295s) is within the limit (172800.0s)
[2025-11-27 15:04:23] 2025-11-27 20:03:48,455 | INFO     | monitor loop #685: job 0:6894252801 is in state 'finished'
[2025-11-27 15:04:23] 2025-11-27 20:03:48,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:04:23] 2025-11-27 20:03:48,820 | INFO     | PID=29307 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 15:04:23] 2025-11-27 20:03:48,821 | INFO     | .. there are 2 such processes running
[2025-11-27 15:04:23] 2025-11-27 20:03:49,822 | INFO     | time since job start (9297s) is within the limit (172800.0s)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,287 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 15:04:23] 2025-11-27 20:03:50,292 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2043.6946874999999
[2025-11-27 15:04:23] 2025-11-27 20:03:50,297 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894252801/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,298 | INFO     | extracted standard info from prmon json
[2025-11-27 15:04:23] 2025-11-27 20:03:50,298 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:04:23] 2025-11-27 20:03:50,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:04:23] 2025-11-27 20:03:50,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 15:04:23] 2025-11-27 20:03:50,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 15:04:23] 2025-11-27 20:03:50,304 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:04:23] 2025-11-27 20:03:50,304 | INFO     | sum of square deviations: 1088905998.0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,305 | INFO     | sum of deviations: 1075151138.5000026
[2025-11-27 15:04:23] 2025-11-27 20:03:50,305 | INFO     | mean x: 1764269162.5
[2025-11-27 15:04:23] 2025-11-27 20:03:50,305 | INFO     | mean y: 2577113.2565789474
[2025-11-27 15:04:23] 2025-11-27 20:03:50,306 | INFO     | intersect: -1739406126.9554207
[2025-11-27 15:04:23] 2025-11-27 20:03:50,306 | INFO     | chi2: 1.27720844084653
[2025-11-27 15:04:23] 2025-11-27 20:03:50,306 | INFO     | sum of square deviations: 984941258.0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,307 | INFO     | sum of deviations: 1077031005.9999952
[2025-11-27 15:04:23] 2025-11-27 20:03:50,307 | INFO     | mean x: 1764269010.0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,307 | INFO     | mean y: 2577116.0544217685
[2025-11-27 15:04:23] 2025-11-27 20:03:50,307 | INFO     | intersect: -1926646998.8469725
[2025-11-27 15:04:23] 2025-11-27 20:03:50,307 | INFO     | chi2: 1.277489237579247
[2025-11-27 15:04:23] 2025-11-27 20:03:50,307 | INFO     | current chi2=1.277489237579247 (change=-0.021985192372425834 %)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,307 | INFO     | right removable region: 146
[2025-11-27 15:04:23] 2025-11-27 20:03:50,307 | INFO     | sum of square deviations: 984941258.0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,308 | INFO     | sum of deviations: -16976848207.0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,308 | INFO     | mean x: 1764269315.0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,308 | INFO     | mean y: 2603127.156462585
[2025-11-27 15:04:23] 2025-11-27 20:03:50,308 | INFO     | intersect: 30412266763.18101
[2025-11-27 15:04:23] 2025-11-27 20:03:50,308 | INFO     | chi2: 0.1277798314994729
[2025-11-27 15:04:23] 2025-11-27 20:03:50,308 | INFO     | current chi2=0.1277798314994729 (change=89.99538153578277 %)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,309 | INFO     | sum of square deviations: 887813855.5
[2025-11-27 15:04:23] 2025-11-27 20:03:50,309 | INFO     | sum of deviations: -14831807057.999996
[2025-11-27 15:04:23] 2025-11-27 20:03:50,309 | INFO     | mean x: 1764269467.5
[2025-11-27 15:04:23] 2025-11-27 20:03:50,309 | INFO     | mean y: 2599685.591549296
[2025-11-27 15:04:23] 2025-11-27 20:03:50,309 | INFO     | intersect: 29476463129.12101
[2025-11-27 15:04:23] 2025-11-27 20:03:50,309 | INFO     | chi2: 0.11484522350246636
[2025-11-27 15:04:23] 2025-11-27 20:03:50,309 | INFO     | current chi2=0.11484522350246636 (change=10.12257399718037 %)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,309 | INFO     | left removable region: 20
[2025-11-27 15:04:23] 2025-11-27 20:03:50,310 | INFO     | sum of square deviations: 620244187.5
[2025-11-27 15:04:23] 2025-11-27 20:03:50,310 | INFO     | sum of deviations: -5092313061.999998
[2025-11-27 15:04:23] 2025-11-27 20:03:50,310 | INFO     | mean x: 1764269589.5
[2025-11-27 15:04:23] 2025-11-27 20:03:50,310 | INFO     | mean y: 2583121.5555555555
[2025-11-27 15:04:23] 2025-11-27 20:03:50,310 | INFO     | intersect: 14487544458.65833
[2025-11-27 15:04:23] 2025-11-27 20:03:50,310 | INFO     | chi2: 0.0698677392091737
[2025-11-27 15:04:23] 2025-11-27 20:03:50,310 | INFO     | current memory leak: -8.21 B/s (using 126 data points, chi2=0.07)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | could have reported an average CPU frequency of 2324 MHz (9 samples)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | ..............................
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | . Timing measurements:
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | . get job = 0 s
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | . initial setup = 2 s
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | . payload setup = 5 s
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | . stage-in = 0 s
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | . payload execution = 9266 s
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | . stage-out = 1 s
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | . log creation = 0 s
[2025-11-27 15:04:23] 2025-11-27 20:03:50,311 | INFO     | ..............................
[2025-11-27 15:04:23] 2025-11-27 20:03:50,361 | INFO     | 
[2025-11-27 15:04:23] 2025-11-27 20:03:50,361 | INFO     | job summary report
[2025-11-27 15:04:23] 2025-11-27 20:03:50,362 | INFO     | --------------------------------------------------
[2025-11-27 15:04:23] 2025-11-27 20:03:50,362 | INFO     | PanDA job id: 6894252801
[2025-11-27 15:04:23] 2025-11-27 20:03:50,362 | INFO     | task id: 47523626
[2025-11-27 15:04:23] 2025-11-27 20:03:50,362 | INFO     | errors: (none)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:04:23] 2025-11-27 20:03:50,362 | INFO     | pilot state: finished 
[2025-11-27 15:04:23] 2025-11-27 20:03:50,362 | INFO     | transexitcode: 0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,362 | INFO     | exeerrorcode: 0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | exeerrordiag: 
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | exitcode: 0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | exitmsg: OK
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | cpuconsumptiontime: 70366 s
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | nevents: 400
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | neventsw: 0
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | pid: 3495
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | pgrp: 3495
[2025-11-27 15:04:23] 2025-11-27 20:03:50,363 | INFO     | corecount: 8
[2025-11-27 15:04:23] 2025-11-27 20:03:50,364 | INFO     | event service: False
[2025-11-27 15:04:23] 2025-11-27 20:03:50,364 | INFO     | sizes: {0: 2283944, 1: 2283944, 5: 2284234, 11: 2284290, 9276: 2312772, 9277: 2321770, 9279: 2321954, 9283: 2322212}
[2025-11-27 15:04:23] 2025-11-27 20:03:50,364 | INFO     | --------------------------------------------------
[2025-11-27 15:04:23] 2025-11-27 20:03:50,364 | INFO     | 
[2025-11-27 15:04:23] 2025-11-27 20:03:50,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 15:04:23] 2025-11-27 20:03:50,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:04:23] 2025-11-27 20:03:50,388 | INFO     | job 6894252801 has completed (purged errors)
[2025-11-27 15:04:23] 2025-11-27 20:03:50,388 | INFO     | overall cleanup function is called
[2025-11-27 15:04:23] 2025-11-27 20:03:51,396 | INFO     | --- collectZombieJob: --- 10, [3495]
[2025-11-27 15:04:23] 2025-11-27 20:03:51,396 | INFO     | zombie collector waiting for pid 3495
[2025-11-27 15:04:23] 2025-11-27 20:03:51,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:04:23] 2025-11-27 20:03:51,397 | INFO     | collected zombie processes
[2025-11-27 15:04:23] 2025-11-27 20:03:51,397 | INFO     | will attempt to kill all subprocesses of pid=3495
[2025-11-27 15:04:23] 2025-11-27 20:03:51,517 | INFO     | process IDs to be killed: [3495] (in reverse order)
[2025-11-27 15:04:23] 2025-11-27 20:03:51,558 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:04:23] 2025-11-27 20:03:51,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:04:23] 2025-11-27 20:03:51,562 | INFO     | did not find any defunct processes belonging to 3495
[2025-11-27 15:04:23] 2025-11-27 20:03:51,564 | INFO     | did not find any defunct processes belonging to 3495
[2025-11-27 15:04:23] 2025-11-27 20:03:51,566 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:04:23] 2025-11-27 20:03:51,566 | INFO     | ready for new job
[2025-11-27 15:04:23] 2025-11-27 20:03:51,566 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:04:23] 2025-11-27 20:03:51,568 | INFO     | ***************************************
[2025-11-27 15:04:23] 2025-11-27 20:03:51,568 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:04:23] 2025-11-27 20:03:51,568 | INFO     | ***************************************
[2025-11-27 15:04:23] 2025-11-27 20:03:51,569 | INFO     | 
[2025-11-27 15:04:23] 2025-11-27 20:03:51,569 | INFO     | architecture information:
[2025-11-27 15:04:23] 2025-11-27 20:03:51,570 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:04:23] 2025-11-27 20:03:51,583 | INFO     | cat /etc/os-release:
[2025-11-27 15:04:23] NAME="CentOS Linux"
[2025-11-27 15:04:23] VERSION="7 (Core)"
[2025-11-27 15:04:23] ID="centos"
[2025-11-27 15:04:23] ID_LIKE="rhel fedora"
[2025-11-27 15:04:23] VERSION_ID="7"
[2025-11-27 15:04:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:04:23] ANSI_COLOR="0;31"
[2025-11-27 15:04:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:04:23] HOME_URL="https://www.centos.org/"
[2025-11-27 15:04:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:04:23] 
[2025-11-27 15:04:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:04:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:04:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:04:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:04:23] 
[2025-11-27 15:04:23] 2025-11-27 20:03:51,583 | INFO     | ***************************************
[2025-11-27 15:04:23] 2025-11-27 20:03:52,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 15:04:23] 2025-11-27 20:03:52,103 | INFO     | sufficient remaining disk space (32010928128 B)
[2025-11-27 15:04:23] 2025-11-27 20:03:52,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:04:23] 2025-11-27 20:03:52,103 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:04:23] 2025-11-27 20:03:52,103 | INFO     | update_server=False
[2025-11-27 15:04:23] 2025-11-27 20:03:52,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:04:23] 2025-11-27 20:03:52,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:04:23] 2025-11-27 20:03:52,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:04:23] 2025-11-27 20:03:52,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:04:23] 2025-11-27 20:03:52,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:04:23] 2025-11-27 20:03:52,106 | INFO     | aborting loop
[2025-11-27 15:04:23] 2025-11-27 20:03:52,116 | INFO     | all payload control threads have been joined
[2025-11-27 15:04:23] 2025-11-27 20:03:53,108 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:53,111 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:53,112 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:53,122 | INFO     | [payload] control thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:53,126 | INFO     | all data control threads have been joined
[2025-11-27 15:04:23] 2025-11-27 20:03:53,267 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:53,528 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:53,633 | INFO     | all job control threads have been joined
[2025-11-27 15:04:23] 2025-11-27 20:03:53,745 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:53,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:54,070 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:54,082 | INFO     | [job] validate thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:54,111 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:54,131 | INFO     | [data] control thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:54,311 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:54,371 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:54,638 | INFO     | [job] control thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:03:56,111 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:04:23] 2025-11-27 20:04:07,011 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:04:23] 2025-11-27 20:04:08,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514838533952)>', '<ExcThread(monitor, started 140514284271360)>']
[2025-11-27 15:04:23] 2025-11-27 20:04:13,490 | INFO     | all workflow threads have been joined
[2025-11-27 15:04:23] 2025-11-27 20:04:13,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:04:23] 2025-11-27 20:04:13,491 | INFO     | traces error code: 0
[2025-11-27 15:04:23] 2025-11-27 20:04:13,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:04:23] 2025-11-27 20:04:23,069 | INFO     | PID=29307 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 15:04:23] 2025-11-27 20:04:23,069 | INFO     | .. there are 2 such processes running
[2025-11-27 15:04:23] 2025-11-27 20:04:23,070 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:04:23] 2025-11-27 20:04:23,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:04:23] 2025-11-27 20:04:23,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:04:23] 2025-11-27 20:04:23,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:04:23] 2025-11-27 20:04:23,070 | INFO     | [monitor] control thread has ended
[2025-11-27 15:04:23] 2025-11-27 20:04:23,191 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:04:23] 2025-11-27 20:04:23,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:04:23] 2025-11-27 20:04:23,198 [wrapper] pilotpid: 29307
[2025-11-27 15:04:23] 2025-11-27 20:04:23,201 [wrapper] Pilot exit status: 0
[2025-11-27 15:04:23] 2025-11-27 20:04:23,212 [wrapper] pandaids: 6894252801
[2025-11-27 15:04:23] 2025-11-27 20:04:23,254 [wrapper] cleanup supervisor_pilot 16368 29308
[2025-11-27 15:04:23] 2025-11-27 20:04:23,258 [wrapper] Test setup, not cleaning
[2025-11-27 15:04:23] 2025-11-27 20:04:23,262 [wrapper] apfmon messages muted
[2025-11-27 15:04:23] 2025-11-27 20:04:23,265 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:04:23] 2025-11-27 20:04:23,269 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:04:23]  *** Error codes and diagnostics ***
[2025-11-27 15:04:23]     "exeErrorCode": 0,
[2025-11-27 15:04:23]     "exeErrorDiag": "",
[2025-11-27 15:04:23]     "pilotErrorCode": 0,
[2025-11-27 15:04:23]     "pilotErrorDiag": "",
[2025-11-27 15:04:23]  *** Listing of results directory ***
[2025-11-27 15:04:23] total 622884
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-27 15:04:23] -rwx------ 1 boincer umatlas     36292 Nov 26 20:29 runpilot2-wrapper.sh
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 20:31 queuedata.json
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas       100 Nov 27 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:04:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 12:28 run_atlas
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas       105 Nov 27 12:28 job.xml
[2025-11-27 15:04:23] -rw-r--r-- 2 boincer umatlas 307057584 Nov 27 12:28 EVNT.47523624._000002.pool.root.1
[2025-11-27 15:04:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 12:28 start_atlas.sh
[2025-11-27 15:04:23] drwxrwx--x 2 boincer umatlas      4096 Nov 27 12:28 shared
[2025-11-27 15:04:23] -rw-r--r-- 2 boincer umatlas    589949 Nov 27 12:28 input.tar.gz
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas         0 Nov 27 12:28 boinc_lockfile
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas      2608 Nov 27 12:28 pandaJob.out
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas        57 Nov 27 12:28 setup.sh.local
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas    991231 Nov 27 12:28 agis_schedconf.cvmfs.json
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas   1516240 Nov 27 12:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:04:23] drwx------ 5 boincer umatlas      4096 Nov 27 12:28 pilot3
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas      6135 Nov 27 15:00 init_data.xml
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas       529 Nov 27 15:03 boinc_task_state.xml
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas 323384358 Nov 27 15:03 HITS.47523626._000023.pool.root.1
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas      1050 Nov 27 15:03 memory_monitor_summary.json
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas    410835 Nov 27 15:03 log.47523626._000023.job.log.tgz.1
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas      7828 Nov 27 15:03 heartbeat.json
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 15:04 boinc_mmap_file
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas        27 Nov 27 15:04 wrapper_checkpoint.txt
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas       820 Nov 27 15:04 pilotlog.txt
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas        95 Nov 27 15:04 pilot_heartbeat.json
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas   1331048 Nov 27 15:04 log.47523626._000023.job.log.1
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas       357 Nov 27 15:04 output.list
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas       620 Nov 27 15:04 runtime_log
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas   1761280 Nov 27 15:04 result.tar.gz
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas      9342 Nov 27 15:04 runtime_log.err
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas       660 Nov 27 15:04 GRvNDmwzfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4eNKDmRbWtHo.diag
[2025-11-27 15:04:23] -rw-r--r-- 1 boincer umatlas     21517 Nov 27 15:04 stderr.txt
[2025-11-27 15:04:23] HITS file was successfully produced:
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas 323384358 Nov 27 15:03 shared/HITS.pool.root.1
[2025-11-27 15:04:23]  *** Contents of shared directory: ***
[2025-11-27 15:04:23] total 617992
[2025-11-27 15:04:23] -rw-r--r-- 2 boincer umatlas 307057584 Nov 27 12:28 ATLAS.root_0
[2025-11-27 15:04:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 12:28 start_atlas.sh
[2025-11-27 15:04:23] -rw-r--r-- 2 boincer umatlas    589949 Nov 27 12:28 input.tar.gz
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas 323384358 Nov 27 15:03 HITS.pool.root.1
[2025-11-27 15:04:23] -rw------- 1 boincer umatlas   1761280 Nov 27 15:04 result.tar.gz
15:04:24 (25625): run_atlas exited; CPU time 70381.943592
15:04:24 (25625): called boinc_finish(0)

</stderr_txt>
]]>

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