Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:31:57 (1208743): wrapper (7.7.26015): starting
13:31:57 (1208743): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 13:31:57] Arguments: --nthreads 8
[2025-11-27 13:31:57] Threads: 8
[2025-11-27 13:31:57] Checking for CVMFS
[2025-11-27 13:31:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 13:31:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 13:31:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 13:31:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 13:31:58] 2.13.3.0 1933508 29056 355788 153379 2 660 25529304 32503809 57124 16776704 0 192187852 99.549 213876023 36904 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 13:31:58] CVMFS is ok
[2025-11-27 13:31:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 13:31:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 13:31:58] Further information can be found at the LHC@home message board.
[2025-11-27 13:31:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 13:31:58] Checking for apptainer binary...
[2025-11-27 13:31:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 13:31:58] Running /usr/bin/apptainer --version
[2025-11-27 13:31:58] apptainer version 1.4.4-1.el9
[2025-11-27 13:31:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 13:31:58] c7-3-16.aglt2.org
[2025-11-27 13:31:58] apptainer works
[2025-11-27 13:31:58] Set ATHENA_PROC_NUMBER=8
[2025-11-27 13:31:58] Set ATHENA_CORE_NUMBER=8
[2025-11-27 13:31:58] Starting ATLAS job with PandaID=6894252228
[2025-11-27 13:31:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 08:47:48]  *** The last 200 lines of the pilot log: ***
[2025-11-28 08:47:48] 2025-11-28 13:46:49,002 | INFO     | time since job start (69273s) is within the limit (172800.0s)
[2025-11-28 08:47:48] 2025-11-28 13:46:50,645 | INFO     | monitor loop #3516: job 0:6894252228 is in state 'finished'
[2025-11-28 08:47:48] 2025-11-28 13:46:50,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 08:47:48] 2025-11-28 13:46:51,008 | INFO     | time since job start (69275s) is within the limit (172800.0s)
[2025-11-28 08:47:48] 2025-11-28 13:46:53,025 | INFO     | time since job start (69277s) is within the limit (172800.0s)
[2025-11-28 08:47:48] 2025-11-28 13:46:53,150 | INFO     | monitor loop #3517: job 0:6894252228 is in state 'finished'
[2025-11-28 08:47:48] 2025-11-28 13:46:53,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 08:47:48] 2025-11-28 13:46:55,031 | INFO     | time since job start (69279s) is within the limit (172800.0s)
[2025-11-28 08:47:48] 2025-11-28 13:46:55,667 | INFO     | monitor loop #3518: job 0:6894252228 is in state 'finished'
[2025-11-28 08:47:48] 2025-11-28 13:46:55,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 08:47:48] 2025-11-28 13:46:57,053 | INFO     | time since job start (69281s) is within the limit (172800.0s)
[2025-11-28 08:47:48] 2025-11-28 13:46:58,202 | INFO     | monitor loop #3519: job 0:6894252228 is in state 'finished'
[2025-11-28 08:47:48] 2025-11-28 13:46:58,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 08:47:48] 2025-11-28 13:46:59,060 | INFO     | time since job start (69283s) is within the limit (172800.0s)
[2025-11-28 08:47:48] 2025-11-28 13:46:59,720 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 08:47:48] 2025-11-28 13:46:59,731 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3271.7799687500005
[2025-11-28 08:47:48] 2025-11-28 13:46:59,776 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6894252228/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 08:47:48] 2025-11-28 13:46:59,778 | INFO     | extracted standard info from prmon json
[2025-11-28 08:47:48] 2025-11-28 13:46:59,778 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 08:47:48] 2025-11-28 13:46:59,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 08:47:48] 2025-11-28 13:46:59,859 | INFO     | fitting pss+swap vs Time
[2025-11-28 08:47:48] 2025-11-28 13:46:59,861 | INFO     | sum of square deviations: 453416062594.23444
[2025-11-28 08:47:48] 2025-11-28 13:47:00,017 | INFO     | sum of deviations: 825989121632.276
[2025-11-28 08:47:48] 2025-11-28 13:47:00,017 | INFO     | mean x: 1764302966.72511
[2025-11-28 08:47:48] 2025-11-28 13:47:00,017 | INFO     | mean y: 2831045.000881057
[2025-11-28 08:47:48] 2025-11-28 13:47:00,017 | INFO     | intersect: -3211203873.481125
[2025-11-28 08:47:48] 2025-11-28 13:47:00,018 | INFO     | chi2: 24.138667055017248
[2025-11-28 08:47:48] 2025-11-28 13:47:00,019 | INFO     | sum of square deviations: 447451092761.25305
[2025-11-28 08:47:48] 2025-11-28 13:47:00,052 | INFO     | sum of deviations: 1233048445128.2825
[2025-11-28 08:47:48] 2025-11-28 13:47:00,053 | INFO     | mean x: 1764302814.2318585
[2025-11-28 08:47:48] 2025-11-28 13:47:00,053 | INFO     | mean y: 2841448.3309734515
[2025-11-28 08:47:48] 2025-11-28 13:47:00,053 | INFO     | intersect: -4859077266.402872
[2025-11-28 08:47:48] 2025-11-28 13:47:00,061 | INFO     | chi2: 20.105273959256877
[2025-11-28 08:47:48] 2025-11-28 13:47:00,062 | INFO     | current chi2=20.105273959256877 (change=16.709261893241223 %)
[2025-11-28 08:47:48] 2025-11-28 13:47:00,062 | INFO     | right removable region: 1129
[2025-11-28 08:47:48] 2025-11-28 13:47:00,063 | INFO     | sum of square deviations: 447449967491.78845
[2025-11-28 08:47:48] 2025-11-28 13:47:00,371 | INFO     | sum of deviations: 452400277708.2101
[2025-11-28 08:47:48] 2025-11-28 13:47:00,371 | INFO     | mean x: 1764303119.2327433
[2025-11-28 08:47:48] 2025-11-28 13:47:00,371 | INFO     | mean y: 2840589.972566372
[2025-11-28 08:47:48] 2025-11-28 13:47:00,371 | INFO     | intersect: -1780981689.8156252
[2025-11-28 08:47:48] 2025-11-28 13:47:00,372 | INFO     | chi2: 21.295694490568735
[2025-11-28 08:47:48] 2025-11-28 13:47:00,372 | INFO     | current chi2=21.295694490568735 (change=11.777670067567371 %)
[2025-11-28 08:47:48] 2025-11-28 13:47:00,372 | INFO     | left removable region: 10
[2025-11-28 08:47:48] 2025-11-28 13:47:00,447 | INFO     | sum of square deviations: 434510671954.93304
[2025-11-28 08:47:48] 2025-11-28 13:47:00,636 | INFO     | sum of deviations: 788091690304.524
[2025-11-28 08:47:48] 2025-11-28 13:47:00,636 | INFO     | mean x: 1764303088.7479892
[2025-11-28 08:47:48] 2025-11-28 13:47:00,637 | INFO     | mean y: 2856442.4557640753
[2025-11-28 08:47:48] 2025-11-28 13:47:00,637 | INFO     | intersect: -3197139997.5974035
[2025-11-28 08:47:48] 2025-11-28 13:47:00,638 | INFO     | chi2: 16.246949393433116
[2025-11-28 08:47:48] 2025-11-28 13:47:00,638 | INFO     | current memory leak: 1.81 B/s (using 1119 data points, chi2=16.25)
[2025-11-28 08:47:48] 2025-11-28 13:47:00,659 | INFO     | could have reported an average CPU frequency of 3261 MHz (41 samples)
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | ..............................
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | . Timing measurements:
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | . get job = 0 s
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | . initial setup = 3 s
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | . payload setup = 11 s
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | . stage-in = 0 s
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | . payload execution = 69189 s
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | . stage-out = 15 s
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | . log creation = 4 s
[2025-11-28 08:47:48] 2025-11-28 13:47:00,660 | INFO     | ..............................
[2025-11-28 08:47:48] 2025-11-28 13:47:01,161 | INFO     | 
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | job summary report
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | --------------------------------------------------
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | PanDA job id: 6894252228
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | task id: 47533962
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | errors: (none)
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | pilot state: finished 
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | transexitcode: 0
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | exeerrorcode: 0
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | exeerrordiag: 
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | exitcode: 0
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | exitmsg: OK
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | cpuconsumptiontime: 192587 s
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | nevents: 1000
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | neventsw: 0
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | pid: 1230336
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | pgrp: 1230336
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | corecount: 8
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | event service: False
[2025-11-28 08:47:48] 2025-11-28 13:47:01,164 | INFO     | sizes: {0: 2284315, 1: 2284315, 8: 2284605, 11: 2284633, 69204: 2340340, 69205: 2340339, 69221: 2349573, 69264: 2349859}
[2025-11-28 08:47:48] 2025-11-28 13:47:01,165 | INFO     | --------------------------------------------------
[2025-11-28 08:47:48] 2025-11-28 13:47:01,165 | INFO     | 
[2025-11-28 08:47:48] 2025-11-28 13:47:01,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | job 6894252228 has completed (purged errors)
[2025-11-28 08:47:48] 2025-11-28 13:47:01,278 | INFO     | overall cleanup function is called
[2025-11-28 08:47:48] 2025-11-28 13:47:02,451 | INFO     | --- collectZombieJob: --- 10, [1230336]
[2025-11-28 08:47:48] 2025-11-28 13:47:02,452 | INFO     | zombie collector waiting for pid 1230336
[2025-11-28 08:47:48] 2025-11-28 13:47:02,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 08:47:48] 2025-11-28 13:47:02,452 | INFO     | collected zombie processes
[2025-11-28 08:47:48] 2025-11-28 13:47:02,452 | INFO     | will attempt to kill all subprocesses of pid=1230336
[2025-11-28 08:47:48] 2025-11-28 13:47:06,194 | INFO     | PID=1212706 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 08:47:48] 2025-11-28 13:47:06,194 | INFO     | .. there are 97 such processes running
[2025-11-28 08:47:48] 2025-11-28 13:47:06,435 | INFO     | process IDs to be killed: [1230336] (in reverse order)
[2025-11-28 08:47:48] 2025-11-28 13:47:06,955 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 08:47:48] 2025-11-28 13:47:06,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 08:47:48] 2025-11-28 13:47:06,993 | INFO     | did not find any defunct processes belonging to 1230336
[2025-11-28 08:47:48] 2025-11-28 13:47:07,062 | INFO     | did not find any defunct processes belonging to 1230336
[2025-11-28 08:47:48] 2025-11-28 13:47:07,067 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 08:47:48] 2025-11-28 13:47:07,067 | INFO     | ready for new job
[2025-11-28 08:47:48] 2025-11-28 13:47:07,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 08:47:48] 2025-11-28 13:47:07,073 | INFO     | ***************************************
[2025-11-28 08:47:48] 2025-11-28 13:47:07,073 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 08:47:48] 2025-11-28 13:47:07,073 | INFO     | ***************************************
[2025-11-28 08:47:48] 2025-11-28 13:47:07,073 | INFO     | 
[2025-11-28 08:47:48] 2025-11-28 13:47:07,082 | INFO     | architecture information:
[2025-11-28 08:47:48] 2025-11-28 13:47:07,090 | INFO     | executing command: cat /etc/os-release
[2025-11-28 08:47:48] 2025-11-28 13:47:07,159 | INFO     | cat /etc/os-release:
[2025-11-28 08:47:48] NAME="CentOS Linux"
[2025-11-28 08:47:48] VERSION="7 (Core)"
[2025-11-28 08:47:48] ID="centos"
[2025-11-28 08:47:48] ID_LIKE="rhel fedora"
[2025-11-28 08:47:48] VERSION_ID="7"
[2025-11-28 08:47:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 08:47:48] ANSI_COLOR="0;31"
[2025-11-28 08:47:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 08:47:48] HOME_URL="https://www.centos.org/"
[2025-11-28 08:47:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 08:47:48] 
[2025-11-28 08:47:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 08:47:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 08:47:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 08:47:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 08:47:48] 
[2025-11-28 08:47:48] 2025-11-28 13:47:07,160 | INFO     | ***************************************
[2025-11-28 08:47:48] 2025-11-28 13:47:07,663 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-28 08:47:48] 2025-11-28 13:47:07,739 | INFO     | sufficient remaining disk space (83489718272 B)
[2025-11-28 08:47:48] 2025-11-28 13:47:07,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 08:47:48] 2025-11-28 13:47:07,739 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 08:47:48] 2025-11-28 13:47:07,739 | INFO     | update_server=False
[2025-11-28 08:47:48] 2025-11-28 13:47:07,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 08:47:48] 2025-11-28 13:47:07,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:47:48] 2025-11-28 13:47:07,739 | INFO     | aborting loop
[2025-11-28 08:47:48] 2025-11-28 13:47:07,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 08:47:48] 2025-11-28 13:47:07,868 | INFO     | all payload control threads have been joined
[2025-11-28 08:47:48] 2025-11-28 13:47:08,215 | INFO     | all job control threads have been joined
[2025-11-28 08:47:48] 2025-11-28 13:47:08,625 | INFO     | all data control threads have been joined
[2025-11-28 08:47:48] 2025-11-28 13:47:08,751 | INFO     | [job] retrieve thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:08,752 | INFO     | [job] job monitor thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:08,876 | INFO     | [payload] control thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:09,257 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:09,316 | INFO     | [job] control thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:09,374 | INFO     | [payload] failed_post thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:09,375 | INFO     | [payload] validate_post thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:09,631 | INFO     | [data] control thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:09,758 | INFO     | [data] copytool_out thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:10,008 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:10,026 | INFO     | [job] validate thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:10,041 | INFO     | [data] copytool_in thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:10,054 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:10,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:10,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:47:48] 2025-11-28 13:47:10,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 08:47:48] 2025-11-28 13:47:11,333 | INFO     | [job] queue monitor thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:14,487 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 08:47:48] 2025-11-28 13:47:25,656 | INFO     | [monitor] cgroup control has ended
[2025-11-28 08:47:48] 2025-11-28 13:47:25,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957576374080)>', '<ExcThread(monitor, started 139956894799616)>']
[2025-11-28 08:47:48] 2025-11-28 13:47:26,731 [wrapper] supervise_pilot (15 min periods counter: 78)
[2025-11-28 08:47:48] 2025-11-28 13:47:30,967 | INFO     | all workflow threads have been joined
[2025-11-28 08:47:48] 2025-11-28 13:47:30,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 08:47:48] 2025-11-28 13:47:30,968 | INFO     | traces error code: 0
[2025-11-28 08:47:48] 2025-11-28 13:47:30,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 08:47:48] 2025-11-28 13:47:43,862 | INFO     | PID=1212706 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 08:47:48] 2025-11-28 13:47:43,863 | INFO     | .. there are 96 such processes running
[2025-11-28 08:47:48] 2025-11-28 13:47:43,864 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 08:47:48] 2025-11-28 13:47:43,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 08:47:48] 2025-11-28 13:47:43,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 08:47:48] 2025-11-28 13:47:43,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 08:47:48] 2025-11-28 13:47:43,864 | INFO     | [monitor] control thread has ended
[2025-11-28 08:47:48] 2025-11-28 13:47:46,016 [wrapper] ==== pilot stdout END ====
[2025-11-28 08:47:48] 2025-11-28 13:47:46,060 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 08:47:48] 2025-11-28 13:47:46,095 [wrapper] pilotpid: 1212706
[2025-11-28 08:47:48] 2025-11-28 13:47:46,155 [wrapper] Pilot exit status: 0
[2025-11-28 08:47:48] 2025-11-28 13:47:46,330 [wrapper] pandaids: 6894252228
[2025-11-28 08:47:48] 2025-11-28 13:47:47,219 [wrapper] cleanup supervisor_pilot  579558 1212707
[2025-11-28 08:47:48] 2025-11-28 13:47:47,252 [wrapper] Test setup, not cleaning
[2025-11-28 08:47:48] 2025-11-28 13:47:47,272 [wrapper] apfmon messages muted
[2025-11-28 08:47:48] 2025-11-28 13:47:47,292 [wrapper] ==== wrapper stdout END ====
[2025-11-28 08:47:48] 2025-11-28 13:47:47,295 [wrapper] ==== wrapper stderr END ====
[2025-11-28 08:47:48]  *** Error codes and diagnostics ***
[2025-11-28 08:47:48]     "exeErrorCode": 0,
[2025-11-28 08:47:48]     "exeErrorDiag": "",
[2025-11-28 08:47:48]     "pilotErrorCode": 0,
[2025-11-28 08:47:48]     "pilotErrorDiag": "",
[2025-11-28 08:47:48]  *** Listing of results directory ***
[2025-11-28 08:47:48] total 1321764
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-28 08:47:48] -rwx------. 1 boincer umatlas     36292 Nov 26 20:29 runpilot2-wrapper.sh
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 20:31 queuedata.json
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas       100 Nov 27 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 08:47:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 13:31 run_atlas
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas       105 Nov 27 13:31 job.xml
[2025-11-28 08:47:48] -rw-r--r--. 2 boincer umatlas 410392403 Nov 27 13:31 EVNT.47493127._001042.pool.root.1
[2025-11-28 08:47:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 13:31 start_atlas.sh
[2025-11-28 08:47:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 13:31 shared
[2025-11-28 08:47:48] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 13:31 input.tar.gz
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas         0 Nov 27 13:31 boinc_lockfile
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 13:31 pandaJob.out
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas        57 Nov 27 13:31 setup.sh.local
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas    991223 Nov 27 13:32 agis_schedconf.cvmfs.json
[2025-11-28 08:47:48] drwx------. 5 boincer umatlas      4096 Nov 27 13:32 pilot3
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas       533 Nov 28 08:11 boinc_task_state.xml
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas 919072725 Nov 28 08:43 HITS.47533962._000416.pool.root.1
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas      6946 Nov 28 08:45 init_data.xml
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas      1061 Nov 28 08:45 memory_monitor_summary.json
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas   1516240 Nov 28 08:46 agis_ddmendpoints.agis.ALL.json
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas   2169846 Nov 28 08:46 log.47533962._000416.job.log.tgz.1
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas      8621 Nov 28 08:47 heartbeat.json
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas        29 Nov 28 08:47 wrapper_checkpoint.txt
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas       823 Nov 28 08:47 pilotlog.txt
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas        95 Nov 28 08:47 pilot_heartbeat.json
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas   7881810 Nov 28 08:47 log.47533962._000416.job.log.1
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas       353 Nov 28 08:47 output.list
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas       620 Nov 28 08:47 runtime_log
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas  10076160 Nov 28 08:47 result.tar.gz
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas      9338 Nov 28 08:47 runtime_log.err
[2025-11-28 08:47:48] -rw-------. 1 boincer umatlas       663 Nov 28 08:47 FFZNDmwzfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmeNKDmxBgOGm.diag
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas     21825 Nov 28 08:47 stderr.txt
[2025-11-28 08:47:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 08:47 boinc_mmap_file
[2025-11-28 08:48:09] HITS file was successfully produced:
[2025-11-28 08:48:09] -rw-------. 1 boincer umatlas 919072725 Nov 28 08:43 shared/HITS.pool.root.1
[2025-11-28 08:48:09]  *** Contents of shared directory: ***
[2025-11-28 08:48:09] total 1308752
[2025-11-28 08:48:09] -rw-r--r--. 2 boincer umatlas 410392403 Nov 27 13:31 ATLAS.root_0
[2025-11-28 08:48:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 13:31 start_atlas.sh
[2025-11-28 08:48:09] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 13:31 input.tar.gz
[2025-11-28 08:48:09] -rw-------. 1 boincer umatlas 919072725 Nov 28 08:43 HITS.pool.root.1
[2025-11-28 08:48:09] -rw-------. 1 boincer umatlas  10076160 Nov 28 08:47 result.tar.gz
08:48:10 (1208743): run_atlas exited; CPU time 194764.370635
08:48:10 (1208743): called boinc_finish(0)

</stderr_txt>
]]>

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