Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:40:17 (1828121): wrapper (7.7.26015): starting
23:40:17 (1828121): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 23:40:17] Arguments: --nthreads 12
[2025-11-27 23:40:17] Threads: 12
[2025-11-27 23:40:17] Checking for CVMFS
[2025-11-27 23:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 23:40:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 23:40:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 23:40:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 23:40:17] 2.13.2.0 2113 3319 47848 153390 1 89 3125457 4096000 676 130560 0 6395201 99.994 152237 727 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 23:40:17] CVMFS is ok
[2025-11-27 23:40:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 23:40:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 23:40:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 23:40:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 23:40:17] Further information can be found at the LHC@home message board.
[2025-11-27 23:40:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 23:40:17] Checking for apptainer binary...
[2025-11-27 23:40:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 23:40:17] Running /usr/bin/apptainer --version
[2025-11-27 23:40:17] apptainer version 1.4.3
[2025-11-27 23:40:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 23:40:17] test-run
[2025-11-27 23:40:17] apptainer works
[2025-11-27 23:40:17] Set ATHENA_PROC_NUMBER=12
[2025-11-27 23:40:17] Set ATHENA_CORE_NUMBER=12
[2025-11-27 23:40:17] Starting ATLAS job with PandaID=6898413928
[2025-11-27 23:40:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:40:36]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | intersect: -228822826876.8816
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | chi2: 9.103671676364765
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | sum of square deviations: 447380466.9911509
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | sum of deviations: 107868562561.8672
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | mean x: 1764290252.0088496
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | mean y: 3274867.132743363
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | intersect: -425387343337.64764
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | chi2: 5.847322607890177
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | current chi2=5.847322607890177 (change=35.769623337019304 %)
[2025-11-28 01:40:36] 2025-11-28 01:39:45,965 | INFO     | sum of square deviations: 390579706.99074095
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of deviations: 102444383326.3241
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean x: 1764290099.5092592
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean y: 3260140.175925926
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | intersect: -462748920830.78705
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | chi2: 5.802689525141106
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | current chi2=5.802689525141106 (change=0.7633080256055205 %)
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | right removable region: 107
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of square deviations: 447379856.9911509
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of deviations: 21323889089.67253
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean x: 1764290557.0088496
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean y: 3282302.3274336285
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | intersect: -84089766527.89165
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | chi2: 5.719986187767671
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | current chi2=5.719986187767671 (change=37.16836029337397 %)
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of square deviations: 390578486.99074095
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of deviations: -16985706300.203701
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean x: 1764290709.5092592
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean y: 3385144.203703704
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | intersect: 76729894202.06868
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | chi2: 3.472343673124298
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | current chi2=3.472343673124298 (change=39.29454444225776 %)
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of square deviations: 338800466.99029166
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of deviations: -22658258361.699028
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean x: 1764290862.0097086
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean y: 3401659.699029126
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | intersect: 117995441433.79468
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | chi2: 3.4217725641452166
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | current chi2=3.4217725641452166 (change=1.4563969969475767 %)
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | left removable region: 30
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of square deviations: 141535128.9870133
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | sum of deviations: 8569886311.844156
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean x: 1764290984.012987
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | mean y: 3560203.1558441557
[2025-11-28 01:40:36] 2025-11-28 01:39:45,966 | INFO     | intersect: -106823439300.19914
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | chi2: 0.002538836268586243
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | current memory leak: 60.55 B/s (using 77 data points, chi2=0.00)
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | could have reported an average CPU frequency of 4299 MHz (7 samples)
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | ..............................
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | . Timing measurements:
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | . get job = 0 s
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | . initial setup = 2 s
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | . payload setup = 1 s
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | . stage-in = 0 s
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | . payload execution = 7146 s
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | . stage-out = 0 s
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | . log creation = 0 s
[2025-11-28 01:40:36] 2025-11-28 01:39:45,967 | INFO     | ..............................
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | 
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | job summary report
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | --------------------------------------------------
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | PanDA job id: 6898413928
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | task id: 47556161
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | errors: (none)
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | pilot state: finished 
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | transexitcode: 0
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | exeerrorcode: 0
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | exeerrordiag: 
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | exitcode: 0
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | exitmsg: OK
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | cpuconsumptiontime: 75374 s
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | nevents: 1000
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | neventsw: 0
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | pid: 1838637
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | pgrp: 1838637
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | corecount: 12
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | event service: False
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | sizes: {0: 2284323, 1: 2284585, 11: 2284613, 7150: 2321936, 7152: 2322126}
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | --------------------------------------------------
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | 
[2025-11-28 01:40:36] 2025-11-28 01:39:46,182 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | job 6898413928 has completed (purged errors)
[2025-11-28 01:40:36] 2025-11-28 01:39:46,188 | INFO     | overall cleanup function is called
[2025-11-28 01:40:36] 2025-11-28 01:39:47,196 | INFO     | --- collectZombieJob: --- 10, [1838637]
[2025-11-28 01:40:36] 2025-11-28 01:39:47,196 | INFO     | zombie collector waiting for pid 1838637
[2025-11-28 01:40:36] 2025-11-28 01:39:47,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:40:36] 2025-11-28 01:39:47,196 | INFO     | collected zombie processes
[2025-11-28 01:40:36] 2025-11-28 01:39:47,196 | INFO     | will attempt to kill all subprocesses of pid=1838637
[2025-11-28 01:40:36] 2025-11-28 01:39:47,209 | INFO     | process IDs to be killed: [1838637] (in reverse order)
[2025-11-28 01:40:36] 2025-11-28 01:39:47,220 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:40:36] 2025-11-28 01:39:47,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:40:36] 2025-11-28 01:39:47,221 | INFO     | did not find any defunct processes belonging to 1838637
[2025-11-28 01:40:36] 2025-11-28 01:39:47,221 | INFO     | did not find any defunct processes belonging to 1838637
[2025-11-28 01:40:36] 2025-11-28 01:39:47,221 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:40:36] 2025-11-28 01:39:47,221 | INFO     | ready for new job
[2025-11-28 01:40:36] 2025-11-28 01:39:47,221 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:40:36] 2025-11-28 01:39:47,222 | INFO     | ***************************************
[2025-11-28 01:40:36] 2025-11-28 01:39:47,222 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:40:36] 2025-11-28 01:39:47,222 | INFO     | ***************************************
[2025-11-28 01:40:36] 2025-11-28 01:39:47,222 | INFO     | 
[2025-11-28 01:40:36] 2025-11-28 01:39:47,222 | INFO     | pilot is running in a VM
[2025-11-28 01:40:36] 2025-11-28 01:39:47,222 | INFO     | architecture information:
[2025-11-28 01:40:36] 2025-11-28 01:39:47,222 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:40:36] 2025-11-28 01:39:47,225 | INFO     | cat /etc/os-release:
[2025-11-28 01:40:36] NAME="CentOS Linux"
[2025-11-28 01:40:36] VERSION="7 (Core)"
[2025-11-28 01:40:36] ID="centos"
[2025-11-28 01:40:36] ID_LIKE="rhel fedora"
[2025-11-28 01:40:36] VERSION_ID="7"
[2025-11-28 01:40:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:40:36] ANSI_COLOR="0;31"
[2025-11-28 01:40:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:40:36] HOME_URL="https://www.centos.org/"
[2025-11-28 01:40:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:40:36] 
[2025-11-28 01:40:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:40:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:40:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:40:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:40:36] 
[2025-11-28 01:40:36] 2025-11-28 01:39:47,225 | INFO     | ***************************************
[2025-11-28 01:40:36] 2025-11-28 01:39:47,728 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-28 01:40:36] 2025-11-28 01:39:47,733 | INFO     | sufficient remaining disk space (72747057152 B)
[2025-11-28 01:40:36] 2025-11-28 01:39:47,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:40:36] 2025-11-28 01:39:47,733 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:40:36] 2025-11-28 01:39:47,733 | INFO     | update_server=False
[2025-11-28 01:40:36] 2025-11-28 01:39:47,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:40:36] 2025-11-28 01:39:47,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:40:36] 2025-11-28 01:39:47,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:40:36] 2025-11-28 01:39:47,943 | INFO     | all data control threads have been joined
[2025-11-28 01:40:36] 2025-11-28 01:39:48,389 | INFO     | all job control threads have been joined
[2025-11-28 01:40:36] 2025-11-28 01:39:48,402 | WARNING  | process 1838637 can no longer be monitored (due to stat problems) - aborting
[2025-11-28 01:40:36] 2025-11-28 01:39:48,412 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:40:36] 2025-11-28 01:39:48,424 | INFO     | number of running child processes to parent process 1838637: 1
[2025-11-28 01:40:36] 2025-11-28 01:39:48,424 | INFO     | maximum number of monitored processes: 18
[2025-11-28 01:40:36] 2025-11-28 01:39:48,424 | INFO     | aborting job monitoring since job object (job id=6898413928) has expired
[2025-11-28 01:40:36] 2025-11-28 01:39:48,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:40:36] 2025-11-28 01:39:48,424 | INFO     | will abort loop
[2025-11-28 01:40:36] 2025-11-28 01:39:48,738 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:48,738 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:48,786 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:48,942 | INFO     | all payload control threads have been joined
[2025-11-28 01:40:36] 2025-11-28 01:39:48,948 | INFO     | [data] control thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,030 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,343 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,394 | INFO     | [job] control thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,429 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,588 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,738 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,847 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:49,947 | INFO     | [payload] control thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:50,027 | INFO     | [job] validate thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:50,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:40:36] 2025-11-28 01:39:50,187 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:39:54,074 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:40:36] 2025-11-28 01:40:18,464 | INFO     | PID=1831979 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:40:36] 2025-11-28 01:40:18,464 | INFO     | .. there are 2 such processes running
[2025-11-28 01:40:36] 2025-11-28 01:40:18,464 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:40:36] 2025-11-28 01:40:18,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:40:36] 2025-11-28 01:40:18,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:40:36] 2025-11-28 01:40:18,902 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-11-28 01:40:36] 2025-11-28 01:40:29,786 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:40:36] 2025-11-28 01:40:31,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127727597905728)>', '<ExcThread(monitor, started 127726883170048)>']
[2025-11-28 01:40:36] 2025-11-28 01:40:31,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:40:36] 2025-11-28 01:40:31,529 | INFO     | [monitor] control thread has ended
[2025-11-28 01:40:36] 2025-11-28 01:40:36,219 | INFO     | all workflow threads have been joined
[2025-11-28 01:40:36] 2025-11-28 01:40:36,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:40:36] 2025-11-28 01:40:36,219 | INFO     | traces error code: 0
[2025-11-28 01:40:36] 2025-11-28 01:40:36,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:40:36] 2025-11-28 01:40:36,245 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:40:36] 2025-11-28 01:40:36,246 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:40:36] 2025-11-28 01:40:36,246 [wrapper] pilotpid: 1831979
[2025-11-28 01:40:36] 2025-11-28 01:40:36,247 [wrapper] Pilot exit status: 0
[2025-11-28 01:40:36] 2025-11-28 01:40:36,249 [wrapper] pandaids: 6898413928
[2025-11-28 01:40:36] 2025-11-28 01:40:36,255 [wrapper] cleanup supervisor_pilot 1884327 1831980
[2025-11-28 01:40:36] 2025-11-28 01:40:36,256 [wrapper] Test setup, not cleaning
[2025-11-28 01:40:36] 2025-11-28 01:40:36,256 [wrapper] apfmon messages muted
[2025-11-28 01:40:36] 2025-11-28 01:40:36,257 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:40:36] 2025-11-28 01:40:36,257 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:40:36]  *** Error codes and diagnostics ***
[2025-11-28 01:40:36]     "exeErrorCode": 0,
[2025-11-28 01:40:36]     "exeErrorDiag": "",
[2025-11-28 01:40:36]     "pilotErrorCode": 0,
[2025-11-28 01:40:36]     "pilotErrorDiag": "",
[2025-11-28 01:40:36]  *** Listing of results directory ***
[2025-11-28 01:40:36] total 1303832
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc    576529 Nov 26 16:12 pilot3.tar.gz
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc      5112 Nov 26 16:35 queuedata.json
[2025-11-28 01:40:36] -rwx------ 1 boinc boinc     36292 Nov 26 16:36 runpilot2-wrapper.sh
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc       100 Nov 27 23:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:40:36] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 23:40 run_atlas
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc       105 Nov 27 23:40 job.xml
[2025-11-28 01:40:36] -rw-r--r-- 2 boinc boinc     15847 Nov 27 23:40 start_atlas.sh
[2025-11-28 01:40:36] drwxrwx--x 2 boinc boinc      4096 Nov 27 23:40 shared
[2025-11-28 01:40:36] -rw-r--r-- 2 boinc boinc    590106 Nov 27 23:40 input.tar.gz
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc      6943 Nov 27 23:40 init_data.xml
[2025-11-28 01:40:36] -rw-r--r-- 2 boinc boinc 410224500 Nov 27 23:40 EVNT.47483658._002630.pool.root.1
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc         0 Nov 27 23:40 boinc_lockfile
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc      2787 Nov 27 23:40 pandaJob.out
[2025-11-28 01:40:36] -rw------- 1 boinc boinc    991532 Nov 27 23:40 agis_schedconf.cvmfs.json
[2025-11-28 01:40:36] -rw------- 1 boinc boinc   1516240 Nov 27 23:40 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:40:36] drwx------ 5 boinc boinc      4096 Nov 27 23:40 pilot3
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc       530 Nov 28 01:34 boinc_task_state.xml
[2025-11-28 01:40:36] -rw------- 1 boinc boinc 915157682 Nov 28 01:39 HITS.47556161._006129.pool.root.1
[2025-11-28 01:40:36] -rw------- 1 boinc boinc      1032 Nov 28 01:39 memory_monitor_summary.json
[2025-11-28 01:40:36] -rw------- 1 boinc boinc   1832341 Nov 28 01:39 log.47556161._006129.job.log.tgz.1
[2025-11-28 01:40:36] -rw------- 1 boinc boinc      8564 Nov 28 01:39 heartbeat.json
[2025-11-28 01:40:36] -rw------- 1 boinc boinc        95 Nov 28 01:40 pilot_heartbeat.json
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc      8192 Nov 28 01:40 boinc_mmap_file
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc        27 Nov 28 01:40 wrapper_checkpoint.txt
[2025-11-28 01:40:36] -rw------- 1 boinc boinc      5421 Nov 28 01:40 pilotlog.txt
[2025-11-28 01:40:36] -rw------- 1 boinc boinc   1079783 Nov 28 01:40 log.47556161._006129.job.log.1
[2025-11-28 01:40:36] -rw------- 1 boinc boinc       353 Nov 28 01:40 output.list
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc       620 Nov 28 01:40 runtime_log
[2025-11-28 01:40:36] -rw------- 1 boinc boinc   2928640 Nov 28 01:40 result.tar.gz
[2025-11-28 01:40:36] -rw------- 1 boinc boinc       647 Nov 28 01:40 v2pLDmzfXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmd4JKDmCDpQhm.diag
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc      8890 Nov 28 01:40 runtime_log.err
[2025-11-28 01:40:36] -rw-r--r-- 1 boinc boinc     21430 Nov 28 01:40 stderr.txt
[2025-11-28 01:40:36] HITS file was successfully produced:
[2025-11-28 01:40:36] -rw------- 1 boinc boinc 915157682 Nov 28 01:39 shared/HITS.pool.root.1
[2025-11-28 01:40:36]  *** Contents of shared directory: ***
[2025-11-28 01:40:36] total 1297788
[2025-11-28 01:40:36] -rw-r--r-- 2 boinc boinc     15847 Nov 27 23:40 start_atlas.sh
[2025-11-28 01:40:36] -rw-r--r-- 2 boinc boinc    590106 Nov 27 23:40 input.tar.gz
[2025-11-28 01:40:36] -rw-r--r-- 2 boinc boinc 410224500 Nov 27 23:40 ATLAS.root_0
[2025-11-28 01:40:36] -rw------- 1 boinc boinc 915157682 Nov 28 01:39 HITS.pool.root.1
[2025-11-28 01:40:36] -rw------- 1 boinc boinc   2928640 Nov 28 01:40 result.tar.gz
01:40:37 (1828121): run_atlas exited; CPU time 75316.273751
01:40:37 (1828121): called boinc_finish(0)

</stderr_txt>
]]>

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