Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:24:44 (1901445): wrapper (7.7.26015): starting
09:24:44 (1901445): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 09:24:44] Arguments: --nthreads 8
[2025-11-27 09:24:44] Threads: 8
[2025-11-27 09:24:44] Checking for CVMFS
[2025-11-27 09:24:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:24:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:24:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:24:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:24:47] 2.11.3.0 137784 30124 157380 153377 2 133 44191416 45568000 18566 130560 0 182085586 99.776 128027978 21833 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-27 09:24:47] CVMFS is ok
[2025-11-27 09:24:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 09:24:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 09:24:47] Further information can be found at the LHC@home message board.
[2025-11-27 09:24:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:24:47] Checking for apptainer binary...
[2025-11-27 09:24:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:24:47] Running /usr/bin/apptainer --version
[2025-11-27 09:24:47] apptainer version 1.4.1-1.el9
[2025-11-27 09:24:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:24:47] wns0008.triumf.lcg
[2025-11-27 09:24:47] apptainer works
[2025-11-27 09:24:47] Set ATHENA_PROC_NUMBER=8
[2025-11-27 09:24:47] Set ATHENA_CORE_NUMBER=8
[2025-11-27 09:24:48] Starting ATLAS job with PandaID=6899449039
[2025-11-27 09:24:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:41:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | ..............................
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . Timing measurements:
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . get job = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . initial setup = 6 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . payload setup = 32 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . stage-in = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . payload execution = 708 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . stage-out = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . log creation = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | ..............................
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 09:41:47] 2025-11-27 17:41:07,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6899449039/pilotlog.txt
[2025-11-27 09:41:47] 2025-11-27 17:41:07,952 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-27 09:41:47] - Log from pilotlog.txt -
[2025-11-27 09:41:47] 2025-11-27 17:41:07,880 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6899449039/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | INFO     | extracted standard info from prmon json
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 09:41:47] 2025-11-27 17:41:07,882 | WARNING  | wrong length of table data, x=[1764264738.0, 1764264799.0, 1764264860.0, 1764264921.0, 1764264982.0], y=[481184.0, 615665.0, 747675.0, 365564.0, 458385.0] (must be
[2025-11-27 09:41:47] 2025-11-27 17:41:07,882 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | ..............................
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . Timing measurements:
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . get job = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . initial setup = 6 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . payload setup = 32 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . stage-in = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . payload execution = 708 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . stage-out = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . log creation = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | ..............................
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 09:41:47] 2025-11-27 17:41:07,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6899449039/pilotlog.txt
[2025-11-27 09:41:47] 2025-11-27 17:41:07,952 | WARNING  | 
[2025-11-27 09:41:47] [begin log extracts]
[2025-11-27 09:41:47] - Log from pilotlog.txt -
[2025-11-27 09:41:47] 2025-11-27 17:41:07,880 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6899449039/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | INFO     | extracted standard info from prmon json
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 09:41:47] 2025-11-27 17:41:07,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 09:41:47] 2025-11-27 17:41:07,882 | WARNING  | wrong length of table data, x=[1764264738.0, 1764264799.0, 1764264860.0, 1764264921.0, 1764264982.0], y=[481184.0, 615665.0, 747675.0, 365564.0, 458385.0] (must be
[2025-11-27 09:41:47] 2025-11-27 17:41:07,882 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | ..............................
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . Timing measurements:
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . get job = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . initial setup = 6 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . payload setup = 32 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . stage-in = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . payload execution = 708 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . stage-out = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | . log creation = 0 s
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | ..............................
[2025-11-27 09:41:47] 2025-11-27 17:41:07,883 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 09:41:47] 2025-11-27 17:41:07,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6899449039/pilotlog.txt
[2025-11-27 09:41:47] [end log extracts]
[2025-11-27 09:41:47] 2025-11-27 17:41:07,952 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-27 09:41:47] 2025-11-27 17:41:07,953 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-27 09:41:47] 2025-11-27 17:41:08,432 | INFO     | 
[2025-11-27 09:41:47] 2025-11-27 17:41:08,432 | INFO     | job summary report
[2025-11-27 09:41:47] 2025-11-27 17:41:08,432 | INFO     | --------------------------------------------------
[2025-11-27 09:41:47] 2025-11-27 17:41:08,432 | INFO     | PanDA job id: 6899449039
[2025-11-27 09:41:47] 2025-11-27 17:41:08,432 | INFO     | task id: 47556173
[2025-11-27 09:41:47] 2025-11-27 17:41:08,432 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-27 09:38:33,522 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-27 09:41:47] 2025-11-27 17:41:08,432 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-27 09:41:47] 2025-11-27 17:41:08,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:41:47] 2025-11-27 17:41:08,461 | INFO     | pilot state: failed 
[2025-11-27 09:41:47] 2025-11-27 17:41:08,461 | INFO     | transexitcode: 65
[2025-11-27 09:41:47] 2025-11-27 17:41:08,461 | INFO     | exeerrorcode: 65
[2025-11-27 09:41:47] 2025-11-27 17:41:08,461 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-27 09:41:47] 2025-11-27 17:41:08,461 | INFO     | exitcode: 65
[2025-11-27 09:41:47] 2025-11-27 17:41:08,461 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-27 09:41:47] 2025-11-27 17:41:08,461 | INFO     | cpuconsumptiontime: 59 s
[2025-11-27 09:41:47] 2025-11-27 17:41:08,461 | INFO     | nevents: 0
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | neventsw: 0
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | pid: 1915801
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | pgrp: 1915801
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | corecount: 8
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | event service: False
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | sizes: {0: 2284142, 1: 2284341, 12: 2284341, 16: 2284631, 23: 2284659, 742: 2310527, 743: 2314817, 745: 2314873, 891: 2315067}
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | --------------------------------------------------
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | 
[2025-11-27 09:41:47] 2025-11-27 17:41:08,462 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-27 09:41:47] 2025-11-27 17:41:08,686 | INFO     | time since job start (936s) is within the limit (172800.0s)
[2025-11-27 09:41:47] 2025-11-27 17:41:08,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:41:47] 2025-11-27 17:41:08,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:41:47] 2025-11-27 17:41:08,740 | INFO     | job 6899449039 has completed (purged errors)
[2025-11-27 09:41:47] 2025-11-27 17:41:08,740 | INFO     | overall cleanup function is called
[2025-11-27 09:41:47] 2025-11-27 17:41:09,822 | INFO     | --- collectZombieJob: --- 10, [1915801]
[2025-11-27 09:41:47] 2025-11-27 17:41:09,822 | INFO     | zombie collector waiting for pid 1915801
[2025-11-27 09:41:47] 2025-11-27 17:41:09,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:41:47] 2025-11-27 17:41:09,822 | INFO     | collected zombie processes
[2025-11-27 09:41:47] 2025-11-27 17:41:09,822 | INFO     | will attempt to kill all subprocesses of pid=1915801
[2025-11-27 09:41:47] 2025-11-27 17:41:12,748 | INFO     | process IDs to be killed: [1915801] (in reverse order)
[2025-11-27 09:41:47] 2025-11-27 17:41:13,008 | INFO     | PID=1907927 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:41:47] 2025-11-27 17:41:13,008 | INFO     | .. there are 26 such processes running
[2025-11-27 09:41:47] 2025-11-27 17:41:13,304 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:41:47] 2025-11-27 17:41:13,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:41:47] 2025-11-27 17:41:13,316 | INFO     | did not find any defunct processes belonging to 1915801
[2025-11-27 09:41:47] 2025-11-27 17:41:13,349 | INFO     | did not find any defunct processes belonging to 1915801
[2025-11-27 09:41:47] 2025-11-27 17:41:13,350 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:41:47] 2025-11-27 17:41:13,350 | INFO     | ready for new job
[2025-11-27 09:41:47] 2025-11-27 17:41:13,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:41:47] 2025-11-27 17:41:13,358 | INFO     | ***************************************
[2025-11-27 09:41:47] 2025-11-27 17:41:13,359 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:41:47] 2025-11-27 17:41:13,359 | INFO     | ***************************************
[2025-11-27 09:41:47] 2025-11-27 17:41:13,359 | INFO     | 
[2025-11-27 09:41:47] 2025-11-27 17:41:13,360 | INFO     | architecture information:
[2025-11-27 09:41:47] 2025-11-27 17:41:13,382 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:41:47] 2025-11-27 17:41:13,498 | INFO     | cat /etc/os-release:
[2025-11-27 09:41:47] NAME="CentOS Linux"
[2025-11-27 09:41:47] VERSION="7 (Core)"
[2025-11-27 09:41:47] ID="centos"
[2025-11-27 09:41:47] ID_LIKE="rhel fedora"
[2025-11-27 09:41:47] VERSION_ID="7"
[2025-11-27 09:41:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:41:47] ANSI_COLOR="0;31"
[2025-11-27 09:41:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:41:47] HOME_URL="https://www.centos.org/"
[2025-11-27 09:41:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:41:47] 
[2025-11-27 09:41:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:41:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:41:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:41:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:41:47] 
[2025-11-27 09:41:47] 2025-11-27 17:41:13,498 | INFO     | ***************************************
[2025-11-27 09:41:47] 2025-11-27 17:41:14,002 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-27 09:41:47] 2025-11-27 17:41:14,092 | INFO     | sufficient remaining disk space (1174278242304 B)
[2025-11-27 09:41:47] 2025-11-27 17:41:14,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:41:47] 2025-11-27 17:41:14,093 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:41:47] 2025-11-27 17:41:14,093 | INFO     | update_server=False
[2025-11-27 09:41:47] 2025-11-27 17:41:14,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:41:47] 2025-11-27 17:41:14,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:41:47] 2025-11-27 17:41:14,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:41:47] 2025-11-27 17:41:14,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:41:47] 2025-11-27 17:41:14,446 | INFO     | all data control threads have been joined
[2025-11-27 09:41:47] 2025-11-27 17:41:14,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:41:47] 2025-11-27 17:41:14,480 | INFO     | aborting loop
[2025-11-27 09:41:47] 2025-11-27 17:41:14,735 | INFO     | all payload control threads have been joined
[2025-11-27 09:41:47] 2025-11-27 17:41:15,100 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,108 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,452 | INFO     | [data] control thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,486 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,612 | INFO     | all job control threads have been joined
[2025-11-27 09:41:47] 2025-11-27 17:41:15,702 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,728 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,728 | INFO     | [job] validate thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,749 | INFO     | [payload] control thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,754 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:15,932 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:16,267 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:16,335 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:16,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:16,573 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:16,618 | INFO     | [job] control thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:18,122 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:41:47] 2025-11-27 17:41:33,483 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:41:47] 2025-11-27 17:41:35,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461173630784)>', '<ExcThread(monitor, started 140460127418112)>']
[2025-11-27 09:41:47] 2025-11-27 17:41:40,360 | INFO     | all workflow threads have been joined
[2025-11-27 09:41:47] 2025-11-27 17:41:40,360 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:41:47] 2025-11-27 17:41:40,360 | INFO     | traces error code: 0
[2025-11-27 09:41:47] 2025-11-27 17:41:40,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:41:47] 2025-11-27 17:41:45,866 | INFO     | PID=1907927 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:41:47] 2025-11-27 17:41:45,866 | INFO     | .. there are 26 such processes running
[2025-11-27 09:41:47] 2025-11-27 17:41:45,866 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:41:47] 2025-11-27 17:41:45,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:41:47] 2025-11-27 17:41:45,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:41:47] 2025-11-27 17:41:45,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:41:47] 2025-11-27 17:41:45,866 | INFO     | [monitor] control thread has ended
[2025-11-27 09:41:47] 2025-11-27 17:41:46,604 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:41:47] 2025-11-27 17:41:46,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:41:47] 2025-11-27 17:41:46,669 [wrapper] pilotpid: 1907927
[2025-11-27 09:41:47] 2025-11-27 17:41:46,713 [wrapper] Pilot exit status: 0
[2025-11-27 09:41:47] 2025-11-27 17:41:46,856 [wrapper] pandaids: 6899449039
[2025-11-27 09:41:47] 2025-11-27 17:41:47,162 [wrapper] cleanup supervisor_pilot 1940276 1907928
[2025-11-27 09:41:47] 2025-11-27 17:41:47,180 [wrapper] Test setup, not cleaning
[2025-11-27 09:41:47] 2025-11-27 17:41:47,251 [wrapper] apfmon messages muted
[2025-11-27 09:41:47] 2025-11-27 17:41:47,284 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:41:47] 2025-11-27 17:41:47,317 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:41:47]  *** Error codes and diagnostics ***
[2025-11-27 09:41:47]     "exeErrorCode": 65,
[2025-11-27 09:41:47]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-27 09:41:47]     "pilotErrorCode": 1305,
[2025-11-27 09:41:47]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-27 09:41:47]  *** Listing of results directory ***
[2025-11-27 09:41:47] total 405452
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc    576529 Nov 26 17:09 pilot3.tar.gz
[2025-11-27 09:41:47] -rwx------. 1 boinc boinc     36292 Nov 26 17:29 runpilot2-wrapper.sh
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc      5112 Nov 26 17:31 queuedata.json
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc       100 Nov 27 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:41:47] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 09:24 run_atlas
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc       105 Nov 27 09:24 job.xml
[2025-11-27 09:41:47] -rw-r--r--. 2 boinc boinc 410794396 Nov 27 09:24 EVNT.47483658._003304.pool.root.1
[2025-11-27 09:41:47] -rw-r--r--. 2 boinc boinc     15847 Nov 27 09:24 start_atlas.sh
[2025-11-27 09:41:47] drwxrwx--x. 2 boinc boinc      4096 Nov 27 09:24 shared
[2025-11-27 09:41:47] -rw-r--r--. 2 boinc boinc    590111 Nov 27 09:24 input.tar.gz
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc      6445 Nov 27 09:24 init_data.xml
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc         0 Nov 27 09:24 boinc_lockfile
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc      2787 Nov 27 09:24 pandaJob.out
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc    991231 Nov 27 09:25 agis_schedconf.cvmfs.json
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc   1516240 Nov 27 09:25 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:41:47] drwx------. 5 boinc boinc      4096 Nov 27 09:25 pilot3
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc       525 Nov 27 09:38 boinc_task_state.xml
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc      1012 Nov 27 09:38 memory_monitor_summary.json
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc     57588 Nov 27 09:38 log.47556173._002607.job.log.tgz.1
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc        95 Nov 27 09:40 pilot_heartbeat.json
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc     10331 Nov 27 09:41 heartbeat.json
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc      8192 Nov 27 09:41 boinc_mmap_file
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc        24 Nov 27 09:41 wrapper_checkpoint.txt
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc       823 Nov 27 09:41 pilotlog.txt
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc    182634 Nov 27 09:41 log.47556173._002607.job.log.1
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc       186 Nov 27 09:41 output.list
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc       620 Nov 27 09:41 runtime_log
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc    266240 Nov 27 09:41 result.tar.gz
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc      8635 Nov 27 09:41 runtime_log.err
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc       649 Nov 27 09:41 rsDODmM0fi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuVKKDm7jZoWo.diag
[2025-11-27 09:41:47] -rw-r--r--. 1 boinc boinc     22644 Nov 27 09:41 stderr.txt
[2025-11-27 09:41:47] No HITS result produced
[2025-11-27 09:41:47]  *** Contents of shared directory: ***
[2025-11-27 09:41:47] total 402024
[2025-11-27 09:41:47] -rw-r--r--. 2 boinc boinc 410794396 Nov 27 09:24 ATLAS.root_0
[2025-11-27 09:41:47] -rw-r--r--. 2 boinc boinc     15847 Nov 27 09:24 start_atlas.sh
[2025-11-27 09:41:47] -rw-r--r--. 2 boinc boinc    590111 Nov 27 09:24 input.tar.gz
[2025-11-27 09:41:47] -rw-------. 1 boinc boinc    266240 Nov 27 09:41 result.tar.gz
09:41:49 (1901445): run_atlas exited; CPU time 78.625513
09:41:49 (1901445): called boinc_finish(0)

</stderr_txt>
]]>

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