Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:36:08 (2810450): wrapper (7.7.26015): starting
12:36:08 (2810450): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 12:36:08] Arguments: --nthreads 8
[2025-11-27 12:36:08] Threads: 8
[2025-11-27 12:36:08] Checking for CVMFS
[2025-11-27 12:36:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 12:36:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 12:36:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 12:36:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 12:36:11] 2.13.2.0 5795 34658 184664 153377 2 323 31772040 39288832 9015 16776704 0 26441989 99.607 26390167 38992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 12:36:11] CVMFS is ok
[2025-11-27 12:36:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 12:36:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 12:36:11] Further information can be found at the LHC@home message board.
[2025-11-27 12:36:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 12:36:11] Checking for apptainer binary...
[2025-11-27 12:36:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 12:36:11] Running /usr/bin/apptainer --version
[2025-11-27 12:36:11] apptainer version 1.4.4-1.el9
[2025-11-27 12:36:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 12:36:11] c-210-14.aglt2.org
[2025-11-27 12:36:11] apptainer works
[2025-11-27 12:36:11] Set ATHENA_PROC_NUMBER=8
[2025-11-27 12:36:11] Set ATHENA_CORE_NUMBER=8
[2025-11-27 12:36:12] Starting ATLAS job with PandaID=6894239621
[2025-11-27 12:36:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 02:58:15]  *** The last 200 lines of the pilot log: ***
[2025-11-28 02:58:15] 2025-11-28 07:57:17,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:58:15] 2025-11-28 07:57:17,657 | INFO     | time since job start (51582s) is within the limit (172800.0s)
[2025-11-28 02:58:15] 2025-11-28 07:57:19,664 | INFO     | time since job start (51584s) is within the limit (172800.0s)
[2025-11-28 02:58:15] 2025-11-28 07:57:20,130 | INFO     | monitor loop #3349: job 0:6894239621 is in state 'finished'
[2025-11-28 02:58:15] 2025-11-28 07:57:20,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:58:15] 2025-11-28 07:57:21,670 | INFO     | time since job start (51586s) is within the limit (172800.0s)
[2025-11-28 02:58:15] 2025-11-28 07:57:21,785 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 02:58:15] 2025-11-28 07:57:21,837 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1683999999996
[2025-11-28 02:58:15] 2025-11-28 07:57:21,899 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894239621/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 02:58:15] 2025-11-28 07:57:21,900 | INFO     | extracted standard info from prmon json
[2025-11-28 02:58:15] 2025-11-28 07:57:21,900 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 02:58:15] 2025-11-28 07:57:21,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 02:58:15] 2025-11-28 07:57:21,905 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-28 02:58:15] 2025-11-28 07:57:21,905 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-28 02:58:15] 2025-11-28 07:57:21,938 | INFO     | fitting pss+swap vs Time
[2025-11-28 02:58:15] 2025-11-28 07:57:21,939 | INFO     | sum of square deviations: 185100747459.43927
[2025-11-28 02:58:15] 2025-11-28 07:57:21,984 | INFO     | sum of deviations: 676666079863.2057
[2025-11-28 02:58:15] 2025-11-28 07:57:21,984 | INFO     | mean x: 1764290891.7648456
[2025-11-28 02:58:15] 2025-11-28 07:57:21,985 | INFO     | mean y: 2582738.7636579573
[2025-11-28 02:58:15] 2025-11-28 07:57:21,985 | INFO     | intersect: -6447071397.454675
[2025-11-28 02:58:15] 2025-11-28 07:57:21,986 | INFO     | chi2: 4.307845819231955
[2025-11-28 02:58:15] 2025-11-28 07:57:21,995 | INFO     | sum of square deviations: 181822791221.58655
[2025-11-28 02:58:15] 2025-11-28 07:57:22,057 | INFO     | sum of deviations: 727010180404.7646
[2025-11-28 02:58:15] 2025-11-28 07:57:22,057 | INFO     | mean x: 1764290739.2664278
[2025-11-28 02:58:15] 2025-11-28 07:57:22,057 | INFO     | mean y: 2585068.4898446836
[2025-11-28 02:58:15] 2025-11-28 07:57:22,057 | INFO     | intersect: -7051851396.94409
[2025-11-28 02:58:15] 2025-11-28 07:57:22,063 | INFO     | chi2: 3.6179594307475598
[2025-11-28 02:58:15] 2025-11-28 07:57:22,063 | INFO     | current chi2=3.6179594307475598 (change=16.014649024913215 %)
[2025-11-28 02:58:15] 2025-11-28 07:57:22,063 | INFO     | right removable region: 836
[2025-11-28 02:58:15] 2025-11-28 07:57:22,065 | INFO     | sum of square deviations: 181822655191.58646
[2025-11-28 02:58:15] 2025-11-28 07:57:22,126 | INFO     | sum of deviations: 434080904789.12585
[2025-11-28 02:58:15] 2025-11-28 07:57:22,126 | INFO     | mean x: 1764291044.2664278
[2025-11-28 02:58:15] 2025-11-28 07:57:22,126 | INFO     | mean y: 2594015.6272401433
[2025-11-28 02:58:15] 2025-11-28 07:57:22,126 | INFO     | intersect: -4209450143.5538692
[2025-11-28 02:58:15] 2025-11-28 07:57:22,136 | INFO     | chi2: 1.487141078628932
[2025-11-28 02:58:15] 2025-11-28 07:57:22,136 | INFO     | current chi2=1.487141078628932 (change=65.47831233908752 %)
[2025-11-28 02:58:15] 2025-11-28 07:57:22,137 | INFO     | sum of square deviations: 178583544820.76453
[2025-11-28 02:58:15] 2025-11-28 07:57:22,224 | INFO     | sum of deviations: 371783934606.52875
[2025-11-28 02:58:15] 2025-11-28 07:57:22,224 | INFO     | mean x: 1764291196.7668269
[2025-11-28 02:58:15] 2025-11-28 07:57:22,224 | INFO     | mean y: 2596944.033653846
[2025-11-28 02:58:15] 2025-11-28 07:57:22,224 | INFO     | intersect: -3670390528.4905477
[2025-11-28 02:58:15] 2025-11-28 07:57:22,226 | INFO     | chi2: 1.2870796195550476
[2025-11-28 02:58:15] 2025-11-28 07:57:22,226 | INFO     | current chi2=1.2870796195550476 (change=13.452755891749755 %)
[2025-11-28 02:58:15] 2025-11-28 07:57:22,226 | INFO     | left removable region: 20
[2025-11-28 02:58:15] 2025-11-28 07:57:22,227 | INFO     | sum of square deviations: 168477804126.92166
[2025-11-28 02:58:15] 2025-11-28 07:57:22,296 | INFO     | sum of deviations: 347667276752.11755
[2025-11-28 02:58:15] 2025-11-28 07:57:22,296 | INFO     | mean x: 1764291318.759804
[2025-11-28 02:58:15] 2025-11-28 07:57:22,296 | INFO     | mean y: 2603004.4852941176
[2025-11-28 02:58:15] 2025-11-28 07:57:22,296 | INFO     | intersect: -3638151701.2712727
[2025-11-28 02:58:15] 2025-11-28 07:57:22,298 | INFO     | chi2: 0.4379722235389002
[2025-11-28 02:58:15] 2025-11-28 07:57:22,300 | INFO     | current memory leak: 2.06 B/s (using 816 data points, chi2=0.44)
[2025-11-28 02:58:15] 2025-11-28 07:57:22,301 | INFO     | could have reported an average CPU frequency of 2600 MHz (32 samples)
[2025-11-28 02:58:15] 2025-11-28 07:57:22,302 | INFO     | ..............................
[2025-11-28 02:58:15] 2025-11-28 07:57:22,302 | INFO     | . Timing measurements:
[2025-11-28 02:58:15] 2025-11-28 07:57:22,302 | INFO     | . get job = 1 s
[2025-11-28 02:58:15] 2025-11-28 07:57:22,302 | INFO     | . initial setup = 5 s
[2025-11-28 02:58:15] 2025-11-28 07:57:22,302 | INFO     | . payload setup = 60 s
[2025-11-28 02:58:15] 2025-11-28 07:57:22,302 | INFO     | . stage-in = 0 s
[2025-11-28 02:58:15] 2025-11-28 07:57:22,302 | INFO     | . payload execution = 51405 s
[2025-11-28 02:58:15] 2025-11-28 07:57:22,302 | INFO     | . stage-out = 4 s
[2025-11-28 02:58:15] 2025-11-28 07:57:22,303 | INFO     | . log creation = 0 s
[2025-11-28 02:58:15] 2025-11-28 07:57:22,303 | INFO     | ..............................
[2025-11-28 02:58:15] 2025-11-28 07:57:22,606 | INFO     | 
[2025-11-28 02:58:15] 2025-11-28 07:57:22,606 | INFO     | job summary report
[2025-11-28 02:58:15] 2025-11-28 07:57:22,606 | INFO     | --------------------------------------------------
[2025-11-28 02:58:15] 2025-11-28 07:57:22,606 | INFO     | PanDA job id: 6894239621
[2025-11-28 02:58:15] 2025-11-28 07:57:22,606 | INFO     | task id: 47523939
[2025-11-28 02:58:15] 2025-11-28 07:57:22,606 | INFO     | errors: (none)
[2025-11-28 02:58:15] 2025-11-28 07:57:22,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | pilot state: finished 
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | transexitcode: 0
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | exeerrorcode: 0
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | exeerrordiag: 
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | exitcode: 0
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | exitmsg: OK
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | cpuconsumptiontime: 138126 s
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | nevents: 400
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | neventsw: 0
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | pid: 2822512
[2025-11-28 02:58:15] 2025-11-28 07:57:22,607 | INFO     | pgrp: 2822512
[2025-11-28 02:58:15] 2025-11-28 07:57:22,608 | INFO     | corecount: 8
[2025-11-28 02:58:15] 2025-11-28 07:57:22,608 | INFO     | event service: False
[2025-11-28 02:58:15] 2025-11-28 07:57:22,608 | INFO     | sizes: {0: 2283072, 1: 2283673, 2: 2283785, 3: 2283813, 4: 2283984, 15: 2284012, 26: 2284168, 37: 2284196, 46: 2284486, 48: 2284514, 51470: 2332854, 51471: 2333133
[2025-11-28 02:58:15] 2025-11-28 07:57:22,608 | INFO     | --------------------------------------------------
[2025-11-28 02:58:15] 2025-11-28 07:57:22,608 | INFO     | 
[2025-11-28 02:58:15] 2025-11-28 07:57:22,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-28 02:58:15] 2025-11-28 07:57:22,665 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,665 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,665 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,666 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,669 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 02:58:15] 2025-11-28 07:57:22,670 | INFO     | job 6894239621 has completed (purged errors)
[2025-11-28 02:58:15] 2025-11-28 07:57:22,670 | INFO     | overall cleanup function is called
[2025-11-28 02:58:15] 2025-11-28 07:57:23,526 | INFO     | PID=2815872 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 02:58:15] 2025-11-28 07:57:23,526 | INFO     | .. there are 8 such processes running
[2025-11-28 02:58:15] 2025-11-28 07:57:23,687 | INFO     | --- collectZombieJob: --- 10, [2822512]
[2025-11-28 02:58:15] 2025-11-28 07:57:23,687 | INFO     | zombie collector waiting for pid 2822512
[2025-11-28 02:58:15] 2025-11-28 07:57:23,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 02:58:15] 2025-11-28 07:57:23,687 | INFO     | collected zombie processes
[2025-11-28 02:58:15] 2025-11-28 07:57:23,687 | INFO     | will attempt to kill all subprocesses of pid=2822512
[2025-11-28 02:58:15] 2025-11-28 07:57:24,242 | INFO     | process IDs to be killed: [2822512] (in reverse order)
[2025-11-28 02:58:15] 2025-11-28 07:57:24,522 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 02:58:15] 2025-11-28 07:57:24,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 02:58:15] 2025-11-28 07:57:24,545 | INFO     | did not find any defunct processes belonging to 2822512
[2025-11-28 02:58:15] 2025-11-28 07:57:24,559 | INFO     | did not find any defunct processes belonging to 2822512
[2025-11-28 02:58:15] 2025-11-28 07:57:24,568 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 02:58:15] 2025-11-28 07:57:24,568 | INFO     | ready for new job
[2025-11-28 02:58:15] 2025-11-28 07:57:24,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 02:58:15] 2025-11-28 07:57:24,577 | INFO     | ***************************************
[2025-11-28 02:58:15] 2025-11-28 07:57:24,577 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 02:58:15] 2025-11-28 07:57:24,577 | INFO     | ***************************************
[2025-11-28 02:58:15] 2025-11-28 07:57:24,578 | INFO     | 
[2025-11-28 02:58:15] 2025-11-28 07:57:24,584 | INFO     | architecture information:
[2025-11-28 02:58:15] 2025-11-28 07:57:24,584 | INFO     | executing command: cat /etc/os-release
[2025-11-28 02:58:15] 2025-11-28 07:57:24,622 | INFO     | cat /etc/os-release:
[2025-11-28 02:58:15] NAME="CentOS Linux"
[2025-11-28 02:58:15] VERSION="7 (Core)"
[2025-11-28 02:58:15] ID="centos"
[2025-11-28 02:58:15] ID_LIKE="rhel fedora"
[2025-11-28 02:58:15] VERSION_ID="7"
[2025-11-28 02:58:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 02:58:15] ANSI_COLOR="0;31"
[2025-11-28 02:58:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 02:58:15] HOME_URL="https://www.centos.org/"
[2025-11-28 02:58:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 02:58:15] 
[2025-11-28 02:58:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 02:58:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 02:58:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 02:58:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 02:58:15] 
[2025-11-28 02:58:15] 2025-11-28 07:57:24,622 | INFO     | ***************************************
[2025-11-28 02:58:15] 2025-11-28 07:57:25,126 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-28 02:58:15] 2025-11-28 07:57:25,222 | INFO     | sufficient remaining disk space (50872713216 B)
[2025-11-28 02:58:15] 2025-11-28 07:57:25,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 02:58:15] 2025-11-28 07:57:25,223 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 02:58:15] 2025-11-28 07:57:25,223 | INFO     | update_server=False
[2025-11-28 02:58:15] 2025-11-28 07:57:25,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 02:58:15] 2025-11-28 07:57:25,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 02:58:15] 2025-11-28 07:57:25,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 02:58:15] 2025-11-28 07:57:25,611 | INFO     | all data control threads have been joined
[2025-11-28 02:58:15] 2025-11-28 07:57:25,822 | INFO     | all payload control threads have been joined
[2025-11-28 02:58:15] 2025-11-28 07:57:26,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:58:15] 2025-11-28 07:57:26,193 | INFO     | aborting loop
[2025-11-28 02:58:15] 2025-11-28 07:57:26,229 | INFO     | [job] retrieve thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:26,281 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:26,451 | INFO     | [job] validate thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:26,617 | INFO     | [data] control thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:26,711 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:26,761 | INFO     | all job control threads have been joined
[2025-11-28 02:58:15] 2025-11-28 07:57:26,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:26,790 | INFO     | [data] copytool_in thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:26,829 | INFO     | [payload] control thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:26,849 | INFO     | [payload] validate_post thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:27,037 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:27,206 | INFO     | [job] job monitor thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:27,230 | INFO     | [data] copytool_out thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:27,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:58:15] 2025-11-28 07:57:27,749 | INFO     | [payload] failed_post thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:27,778 | INFO     | [job] control thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:28,629 | INFO     | [job] queue monitor thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:29,551 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 02:58:15] 2025-11-28 07:57:56,179 | INFO     | PID=2815872 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 02:58:15] 2025-11-28 07:57:56,179 | INFO     | .. there are 8 such processes running
[2025-11-28 02:58:15] 2025-11-28 07:57:56,180 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 02:58:15] 2025-11-28 07:57:56,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 02:58:15] 2025-11-28 07:57:56,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 02:58:15] 2025-11-28 07:58:06,499 | INFO     | [monitor] cgroup control has ended
[2025-11-28 02:58:15] 2025-11-28 07:58:08,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513669015360)>', '<ExcThread(monitor, started 140513176958720)>']
[2025-11-28 02:58:15] 2025-11-28 07:58:09,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 02:58:15] 2025-11-28 07:58:09,264 | INFO     | [monitor] control thread has ended
[2025-11-28 02:58:15] 2025-11-28 07:58:13,613 | INFO     | all workflow threads have been joined
[2025-11-28 02:58:15] 2025-11-28 07:58:13,613 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 02:58:15] 2025-11-28 07:58:13,613 | INFO     | traces error code: 0
[2025-11-28 02:58:15] 2025-11-28 07:58:13,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 02:58:15] 2025-11-28 07:58:13,961 [wrapper] ==== pilot stdout END ====
[2025-11-28 02:58:15] 2025-11-28 07:58:14,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 02:58:15] 2025-11-28 07:58:14,103 [wrapper] pilotpid: 2815872
[2025-11-28 02:58:15] 2025-11-28 07:58:14,162 [wrapper] Pilot exit status: 0
[2025-11-28 02:58:15] 2025-11-28 07:58:14,625 [wrapper] pandaids: 6894239621
[2025-11-28 02:58:15] 2025-11-28 07:58:14,749 [wrapper] cleanup supervisor_pilot 4051884 2815873
[2025-11-28 02:58:15] 2025-11-28 07:58:14,761 [wrapper] Test setup, not cleaning
[2025-11-28 02:58:15] 2025-11-28 07:58:14,787 [wrapper] apfmon messages muted
[2025-11-28 02:58:15] 2025-11-28 07:58:14,813 [wrapper] ==== wrapper stdout END ====
[2025-11-28 02:58:15] 2025-11-28 07:58:14,833 [wrapper] ==== wrapper stderr END ====
[2025-11-28 02:58:15]  *** Error codes and diagnostics ***
[2025-11-28 02:58:15]     "exeErrorCode": 0,
[2025-11-28 02:58:15]     "exeErrorDiag": "",
[2025-11-28 02:58:15]     "pilotErrorCode": 0,
[2025-11-28 02:58:15]     "pilotErrorDiag": "",
[2025-11-28 02:58:15]  *** Listing of results directory ***
[2025-11-28 02:58:15] total 635460
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-28 02:58:15] -rwx------. 1 boincer umatlas     36292 Nov 26 20:29 runpilot2-wrapper.sh
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 20:31 queuedata.json
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas       100 Nov 27 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 02:58:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 12:36 run_atlas
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas       105 Nov 27 12:36 job.xml
[2025-11-28 02:58:15] -rw-r--r--. 2 boincer umatlas 293470049 Nov 27 12:36 EVNT.47523935._000005.pool.root.1
[2025-11-28 02:58:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 12:36 start_atlas.sh
[2025-11-28 02:58:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 12:36 shared
[2025-11-28 02:58:15] -rw-r--r--. 2 boincer umatlas    589949 Nov 27 12:36 input.tar.gz
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas         0 Nov 27 12:36 boinc_lockfile
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas      2612 Nov 27 12:36 pandaJob.out
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas        57 Nov 27 12:36 setup.sh.local
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas    991231 Nov 27 12:37 agis_schedconf.cvmfs.json
[2025-11-28 02:58:15] drwx------. 5 boincer umatlas      4096 Nov 27 12:37 pilot3
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas       532 Nov 28 02:55 boinc_task_state.xml
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas 338067119 Nov 28 02:55 HITS.47523939._000103.pool.root.1
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas      6661 Nov 28 02:55 init_data.xml
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas      1044 Nov 28 02:56 memory_monitor_summary.json
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas   1516240 Nov 28 02:56 agis_ddmendpoints.agis.ALL.json
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas    938198 Nov 28 02:56 log.47523939._000103.job.log.tgz.1
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas      7822 Nov 28 02:57 heartbeat.json
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 02:57 boinc_mmap_file
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas        29 Nov 28 02:57 wrapper_checkpoint.txt
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas        95 Nov 28 02:57 pilot_heartbeat.json
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas      4823 Nov 28 02:58 pilotlog.txt
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas   6695762 Nov 28 02:58 log.47523939._000103.job.log.1
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas       357 Nov 28 02:58 output.list
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas       620 Nov 28 02:58 runtime_log
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas   7649280 Nov 28 02:58 result.tar.gz
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas      9343 Nov 28 02:58 runtime_log.err
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas       659 Nov 28 02:58 GcHKDmxzfi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5UKKDmfXUaSn.diag
[2025-11-28 02:58:15] -rw-r--r--. 1 boincer umatlas     21627 Nov 28 02:58 stderr.txt
[2025-11-28 02:58:15] HITS file was successfully produced:
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas 338067119 Nov 28 02:55 shared/HITS.pool.root.1
[2025-11-28 02:58:15]  *** Contents of shared directory: ***
[2025-11-28 02:58:15] total 624808
[2025-11-28 02:58:15] -rw-r--r--. 2 boincer umatlas 293470049 Nov 27 12:36 ATLAS.root_0
[2025-11-28 02:58:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 12:36 start_atlas.sh
[2025-11-28 02:58:15] -rw-r--r--. 2 boincer umatlas    589949 Nov 27 12:36 input.tar.gz
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas 338067119 Nov 28 02:55 HITS.pool.root.1
[2025-11-28 02:58:15] -rw-------. 1 boincer umatlas   7649280 Nov 28 02:58 result.tar.gz
02:58:17 (2810450): run_atlas exited; CPU time 139625.131694
02:58:17 (2810450): called boinc_finish(0)

</stderr_txt>
]]>

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