Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:40:46 (2438556): wrapper (7.7.26015): starting
19:40:46 (2438556): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 19:40:46] Arguments: --nthreads 8
[2025-11-27 19:40:46] Threads: 8
[2025-11-27 19:40:46] Checking for CVMFS
[2025-11-27 19:40:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 19:40:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 19:40:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 19:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 19:40:48] 2.13.2.0 6468 35938 460296 153391 0 714 30838266 40960001 15122 16776704 0 128132113 99.592 140377897 39582 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 19:40:48] CVMFS is ok
[2025-11-27 19:40:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 19:40:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 19:40:48] Further information can be found at the LHC@home message board.
[2025-11-27 19:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 19:40:48] Checking for apptainer binary...
[2025-11-27 19:40:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 19:40:48] Running /usr/bin/apptainer --version
[2025-11-27 19:40:48] apptainer version 1.4.4-1.el9
[2025-11-27 19:40:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 19:40:48] c-206-41.aglt2.org
[2025-11-27 19:40:48] apptainer works
[2025-11-27 19:40:48] Set ATHENA_PROC_NUMBER=8
[2025-11-27 19:40:48] Set ATHENA_CORE_NUMBER=8
[2025-11-27 19:40:48] Starting ATLAS job with PandaID=6898988813
[2025-11-27 19:40:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 08:52:47]  *** The last 200 lines of the pilot log: ***
[2025-11-28 08:52:47] 2025-11-28 13:52:05,235 | INFO     | monitor loop #3239: job 0:6898988813 is in state 'finished'
[2025-11-28 08:52:47] 2025-11-28 13:52:05,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 08:52:47] 2025-11-28 13:52:06,222 | INFO     | time since job start (47448s) is within the limit (172800.0s)
[2025-11-28 08:52:47] 2025-11-28 13:52:07,241 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 08:52:47] 2025-11-28 13:52:07,252 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3226.715703125
[2025-11-28 08:52:47] 2025-11-28 13:52:07,295 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898988813/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 08:52:47] 2025-11-28 13:52:07,296 | INFO     | extracted standard info from prmon json
[2025-11-28 08:52:47] 2025-11-28 13:52:07,296 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 08:52:47] 2025-11-28 13:52:07,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 08:52:47] 2025-11-28 13:52:07,339 | INFO     | fitting pss+swap vs Time
[2025-11-28 08:52:47] 2025-11-28 13:52:07,367 | INFO     | sum of square deviations: 145450920633.70145
[2025-11-28 08:52:47] 2025-11-28 13:52:07,387 | INFO     | sum of deviations: 1304415359874.5408
[2025-11-28 08:52:47] 2025-11-28 13:52:07,387 | INFO     | mean x: 1764314192.6048906
[2025-11-28 08:52:47] 2025-11-28 13:52:07,387 | INFO     | mean y: 2922371.5945945946
[2025-11-28 08:52:47] 2025-11-28 13:52:07,387 | INFO     | intersect: -15819586846.303244
[2025-11-28 08:52:47] 2025-11-28 13:52:07,388 | INFO     | chi2: 7.111136641435811
[2025-11-28 08:52:47] 2025-11-28 13:52:07,393 | INFO     | sum of square deviations: 142661476304.55475
[2025-11-28 08:52:47] 2025-11-28 13:52:07,418 | INFO     | sum of deviations: 1543401702117.7488
[2025-11-28 08:52:47] 2025-11-28 13:52:07,419 | INFO     | mean x: 1764314040.1217616
[2025-11-28 08:52:47] 2025-11-28 13:52:07,419 | INFO     | mean y: 2935431.4494818654
[2025-11-28 08:52:47] 2025-11-28 13:52:07,419 | INFO     | intersect: -19084525059.853664
[2025-11-28 08:52:47] 2025-11-28 13:52:07,419 | INFO     | chi2: 4.431549229769619
[2025-11-28 08:52:47] 2025-11-28 13:52:07,420 | INFO     | current chi2=4.431549229769619 (change=37.68156269213744 %)
[2025-11-28 08:52:47] 2025-11-28 13:52:07,420 | INFO     | sum of square deviations: 139907610368.8425
[2025-11-28 08:52:47] 2025-11-28 13:52:07,447 | INFO     | sum of deviations: 1630312341465.2222
[2025-11-28 08:52:47] 2025-11-28 13:52:07,447 | INFO     | mean x: 1764313887.6297262
[2025-11-28 08:52:47] 2025-11-28 13:52:07,451 | INFO     | mean y: 2940235.525423729
[2025-11-28 08:52:47] 2025-11-28 13:52:07,451 | INFO     | intersect: -20556218037.83895
[2025-11-28 08:52:47] 2025-11-28 13:52:07,452 | INFO     | chi2: 3.8788022747144244
[2025-11-28 08:52:47] 2025-11-28 13:52:07,452 | INFO     | current chi2=3.8788022747144244 (change=12.47299592977623 %)
[2025-11-28 08:52:47] 2025-11-28 13:52:07,452 | INFO     | right removable region: 766
[2025-11-28 08:52:47] 2025-11-28 13:52:07,453 | INFO     | sum of square deviations: 142660241664.55472
[2025-11-28 08:52:47] 2025-11-28 13:52:07,487 | INFO     | sum of deviations: 1037665137383.3771
[2025-11-28 08:52:47] 2025-11-28 13:52:07,488 | INFO     | mean x: 1764314345.1217616
[2025-11-28 08:52:47] 2025-11-28 13:52:07,488 | INFO     | mean y: 2936939.4002590673
[2025-11-28 08:52:47] 2025-11-28 13:52:07,488 | INFO     | intersect: -12830123386.005787
[2025-11-28 08:52:47] 2025-11-28 13:52:07,489 | INFO     | chi2: 4.117058199380359
[2025-11-28 08:52:47] 2025-11-28 13:52:07,489 | INFO     | current chi2=4.117058199380359 (change=42.10407692926734 %)
[2025-11-28 08:52:47] 2025-11-28 13:52:07,489 | INFO     | sum of square deviations: 139905611021.7834
[2025-11-28 08:52:47] 2025-11-28 13:52:07,519 | INFO     | sum of deviations: 906834804087.7148
[2025-11-28 08:52:47] 2025-11-28 13:52:07,520 | INFO     | mean x: 1764314497.6349413
[2025-11-28 08:52:47] 2025-11-28 13:52:07,524 | INFO     | mean y: 2944171.988265971
[2025-11-28 08:52:47] 2025-11-28 13:52:07,524 | INFO     | intersect: -11432921624.436335
[2025-11-28 08:52:47] 2025-11-28 13:52:07,525 | INFO     | chi2: 3.3958476601036436
[2025-11-28 08:52:47] 2025-11-28 13:52:07,525 | INFO     | current chi2=3.3958476601036436 (change=17.517618268919836 %)
[2025-11-28 08:52:47] 2025-11-28 13:52:07,525 | INFO     | left removable region: 20
[2025-11-28 08:52:47] 2025-11-28 13:52:07,526 | INFO     | sum of square deviations: 128725521045.34593
[2025-11-28 08:52:47] 2025-11-28 13:52:07,550 | INFO     | sum of deviations: 1140228626383.6738
[2025-11-28 08:52:47] 2025-11-28 13:52:07,550 | INFO     | mean x: 1764314467.1742628
[2025-11-28 08:52:47] 2025-11-28 13:52:07,550 | INFO     | mean y: 2967538.587131367
[2025-11-28 08:52:47] 2025-11-28 13:52:07,550 | INFO     | intersect: -15625027944.191198
[2025-11-28 08:52:47] 2025-11-28 13:52:07,551 | INFO     | chi2: 0.08266569879344061
[2025-11-28 08:52:47] 2025-11-28 13:52:07,551 | INFO     | current memory leak: 8.86 B/s (using 746 data points, chi2=0.08)
[2025-11-28 08:52:47] 2025-11-28 13:52:07,553 | INFO     | could have reported an average CPU frequency of 3200 MHz (29 samples)
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | ..............................
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | . Timing measurements:
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | . get job = 0 s
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | . initial setup = 3 s
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | . payload setup = 12 s
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | . stage-in = 0 s
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | . payload execution = 47384 s
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | . stage-out = 4 s
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | . log creation = 1 s
[2025-11-28 08:52:47] 2025-11-28 13:52:07,554 | INFO     | ..............................
[2025-11-28 08:52:47] 2025-11-28 13:52:08,051 | INFO     | 
[2025-11-28 08:52:47] 2025-11-28 13:52:08,051 | INFO     | job summary report
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | --------------------------------------------------
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | PanDA job id: 6898988813
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | task id: 47556161
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | errors: (none)
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | pilot state: finished 
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | transexitcode: 0
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | exeerrorcode: 0
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | exeerrordiag: 
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | exitcode: 0
[2025-11-28 08:52:47] 2025-11-28 13:52:08,052 | INFO     | exitmsg: OK
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | cpuconsumptiontime: 196360 s
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | nevents: 1000
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | neventsw: 0
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | pid: 2455280
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | pgrp: 2455280
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | corecount: 8
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | event service: False
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | sizes: {0: 2284317, 10: 2284579, 11: 2284607, 47400: 2332462, 47405: 2341456, 47406: 2341512, 47430: 2341886}
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | --------------------------------------------------
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | 
[2025-11-28 08:52:47] 2025-11-28 13:52:08,053 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-28 08:52:47] 2025-11-28 13:52:08,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 08:52:47] 2025-11-28 13:52:08,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 08:52:47] 2025-11-28 13:52:08,140 | INFO     | job 6898988813 has completed (purged errors)
[2025-11-28 08:52:47] 2025-11-28 13:52:08,140 | INFO     | overall cleanup function is called
[2025-11-28 08:52:47] 2025-11-28 13:52:09,158 | INFO     | --- collectZombieJob: --- 10, [2455280]
[2025-11-28 08:52:47] 2025-11-28 13:52:09,158 | INFO     | zombie collector waiting for pid 2455280
[2025-11-28 08:52:47] 2025-11-28 13:52:09,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 08:52:47] 2025-11-28 13:52:09,158 | INFO     | collected zombie processes
[2025-11-28 08:52:47] 2025-11-28 13:52:09,158 | INFO     | will attempt to kill all subprocesses of pid=2455280
[2025-11-28 08:52:47] 2025-11-28 13:52:09,498 | INFO     | process IDs to be killed: [2455280] (in reverse order)
[2025-11-28 08:52:47] 2025-11-28 13:52:09,709 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 08:52:47] 2025-11-28 13:52:09,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 08:52:47] 2025-11-28 13:52:09,723 | INFO     | did not find any defunct processes belonging to 2455280
[2025-11-28 08:52:47] 2025-11-28 13:52:09,740 | INFO     | did not find any defunct processes belonging to 2455280
[2025-11-28 08:52:47] 2025-11-28 13:52:09,749 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 08:52:47] 2025-11-28 13:52:09,749 | INFO     | ready for new job
[2025-11-28 08:52:47] 2025-11-28 13:52:09,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 08:52:47] 2025-11-28 13:52:09,754 | INFO     | ***************************************
[2025-11-28 08:52:47] 2025-11-28 13:52:09,754 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 08:52:47] 2025-11-28 13:52:09,755 | INFO     | ***************************************
[2025-11-28 08:52:47] 2025-11-28 13:52:09,755 | INFO     | 
[2025-11-28 08:52:47] 2025-11-28 13:52:09,758 | INFO     | architecture information:
[2025-11-28 08:52:47] 2025-11-28 13:52:09,759 | INFO     | executing command: cat /etc/os-release
[2025-11-28 08:52:47] 2025-11-28 13:52:09,777 | INFO     | cat /etc/os-release:
[2025-11-28 08:52:47] NAME="CentOS Linux"
[2025-11-28 08:52:47] VERSION="7 (Core)"
[2025-11-28 08:52:47] ID="centos"
[2025-11-28 08:52:47] ID_LIKE="rhel fedora"
[2025-11-28 08:52:47] VERSION_ID="7"
[2025-11-28 08:52:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 08:52:47] ANSI_COLOR="0;31"
[2025-11-28 08:52:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 08:52:47] HOME_URL="https://www.centos.org/"
[2025-11-28 08:52:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 08:52:47] 
[2025-11-28 08:52:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 08:52:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 08:52:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 08:52:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 08:52:47] 
[2025-11-28 08:52:47] 2025-11-28 13:52:09,777 | INFO     | ***************************************
[2025-11-28 08:52:47] 2025-11-28 13:52:10,280 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-28 08:52:47] 2025-11-28 13:52:10,446 | INFO     | sufficient remaining disk space (77776027648 B)
[2025-11-28 08:52:47] 2025-11-28 13:52:10,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 08:52:47] 2025-11-28 13:52:10,447 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 08:52:47] 2025-11-28 13:52:10,447 | INFO     | update_server=False
[2025-11-28 08:52:47] 2025-11-28 13:52:10,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 08:52:47] 2025-11-28 13:52:10,465 | INFO     | all payload control threads have been joined
[2025-11-28 08:52:47] 2025-11-28 13:52:10,839 | INFO     | all job control threads have been joined
[2025-11-28 08:52:47] 2025-11-28 13:52:10,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 08:52:47] 2025-11-28 13:52:10,864 | INFO     | all data control threads have been joined
[2025-11-28 08:52:47] 2025-11-28 13:52:11,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:52:47] 2025-11-28 13:52:11,257 | INFO     | aborting loop
[2025-11-28 08:52:47] 2025-11-28 13:52:11,454 | INFO     | [job] retrieve thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:11,485 | INFO     | [payload] control thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:11,628 | INFO     | [payload] validate_post thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:11,670 | INFO     | [job] validate thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:11,845 | INFO     | [job] control thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:11,875 | INFO     | [data] control thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:12,062 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:12,134 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:12,261 | INFO     | [job] job monitor thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:12,489 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:12,677 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:12,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:52:47] 2025-11-28 13:52:12,857 | INFO     | [data] copytool_out thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:12,858 | INFO     | [payload] failed_post thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:12,935 | INFO     | [data] copytool_in thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:13,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 08:52:47] 2025-11-28 13:52:13,711 | INFO     | [job] queue monitor thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:17,122 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 08:52:47] 2025-11-28 13:52:40,242 | INFO     | PID=2444281 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 08:52:47] 2025-11-28 13:52:40,242 | INFO     | .. there are 22 such processes running
[2025-11-28 08:52:47] 2025-11-28 13:52:40,252 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 08:52:47] 2025-11-28 13:52:40,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 08:52:47] 2025-11-28 13:52:40,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 08:52:47] 2025-11-28 13:52:40,714 | INFO     | [monitor] cgroup control has ended
[2025-11-28 08:52:47] 2025-11-28 13:52:41,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965137049408)>', '<ExcThread(monitor, started 139964637497088)>']
[2025-11-28 08:52:47] 2025-11-28 13:52:42,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 08:52:47] 2025-11-28 13:52:42,263 | INFO     | [monitor] control thread has ended
[2025-11-28 08:52:47] 2025-11-28 13:52:46,754 | INFO     | all workflow threads have been joined
[2025-11-28 08:52:47] 2025-11-28 13:52:46,754 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 08:52:47] 2025-11-28 13:52:46,755 | INFO     | traces error code: 0
[2025-11-28 08:52:47] 2025-11-28 13:52:46,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 08:52:47] 2025-11-28 13:52:46,895 [wrapper] ==== pilot stdout END ====
[2025-11-28 08:52:47] 2025-11-28 13:52:46,904 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 08:52:47] 2025-11-28 13:52:46,911 [wrapper] pilotpid: 2444281
[2025-11-28 08:52:47] 2025-11-28 13:52:46,918 [wrapper] Pilot exit status: 0
[2025-11-28 08:52:47] 2025-11-28 13:52:46,945 [wrapper] pandaids: 6898988813
[2025-11-28 08:52:47] 2025-11-28 13:52:47,025 [wrapper] cleanup supervisor_pilot 4171324 2444282
[2025-11-28 08:52:47] 2025-11-28 13:52:47,032 [wrapper] Test setup, not cleaning
[2025-11-28 08:52:47] 2025-11-28 13:52:47,035 [wrapper] apfmon messages muted
[2025-11-28 08:52:47] 2025-11-28 13:52:47,048 [wrapper] ==== wrapper stdout END ====
[2025-11-28 08:52:47] 2025-11-28 13:52:47,070 [wrapper] ==== wrapper stderr END ====
[2025-11-28 08:52:47]  *** Error codes and diagnostics ***
[2025-11-28 08:52:47]     "exeErrorCode": 0,
[2025-11-28 08:52:47]     "exeErrorDiag": "",
[2025-11-28 08:52:47]     "pilotErrorCode": 0,
[2025-11-28 08:52:47]     "pilotErrorDiag": "",
[2025-11-28 08:52:47]  *** Listing of results directory ***
[2025-11-28 08:52:47] total 1316056
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-28 08:52:47] -rwx------. 1 boincer umatlas     36292 Nov 26 20:28 runpilot2-wrapper.sh
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 20:30 queuedata.json
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas       100 Nov 27 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 08:52:47] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 19:40 run_atlas
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas       105 Nov 27 19:40 job.xml
[2025-11-28 08:52:47] -rw-r--r--. 2 boincer umatlas 411033443 Nov 27 19:40 EVNT.47483658._002772.pool.root.1
[2025-11-28 08:52:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 19:40 start_atlas.sh
[2025-11-28 08:52:47] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 19:40 shared
[2025-11-28 08:52:47] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 19:40 input.tar.gz
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas         0 Nov 27 19:40 boinc_lockfile
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas      2788 Nov 27 19:40 pandaJob.out
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas        57 Nov 27 19:40 setup.sh.local
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas    991826 Nov 27 19:41 agis_schedconf.cvmfs.json
[2025-11-28 08:52:47] drwx------. 5 boincer umatlas      4096 Nov 27 19:41 pilot3
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas       533 Nov 28 08:41 boinc_task_state.xml
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas      6903 Nov 28 08:46 init_data.xml
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas 915709583 Nov 28 08:51 HITS.47556161._007547.pool.root.1
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas      1049 Nov 28 08:51 memory_monitor_summary.json
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas   1516240 Nov 28 08:51 agis_ddmendpoints.agis.ALL.json
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas   2006905 Nov 28 08:51 log.47556161._007547.job.log.tgz.1
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas      8581 Nov 28 08:52 heartbeat.json
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas        95 Nov 28 08:52 pilot_heartbeat.json
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 08:52 boinc_mmap_file
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas        29 Nov 28 08:52 wrapper_checkpoint.txt
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas      4824 Nov 28 08:52 pilotlog.txt
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas   6483072 Nov 28 08:52 log.47556161._007547.job.log.1
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas       353 Nov 28 08:52 output.list
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas       620 Nov 28 08:52 runtime_log
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas   8509440 Nov 28 08:52 result.tar.gz
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas      9343 Nov 28 08:52 runtime_log.err
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas       660 Nov 28 08:52 m3qNDmQzfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLaNKDmVJjfJo.diag
[2025-11-28 08:52:47] -rw-r--r--. 1 boincer umatlas     20528 Nov 28 08:52 stderr.txt
[2025-11-28 08:52:47] HITS file was successfully produced:
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas 915709583 Nov 28 08:51 shared/HITS.pool.root.1
[2025-11-28 08:52:47]  *** Contents of shared directory: ***
[2025-11-28 08:52:47] total 1304564
[2025-11-28 08:52:47] -rw-r--r--. 2 boincer umatlas 411033443 Nov 27 19:40 ATLAS.root_0
[2025-11-28 08:52:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 19:40 start_atlas.sh
[2025-11-28 08:52:47] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 19:40 input.tar.gz
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas 915709583 Nov 28 08:51 HITS.pool.root.1
[2025-11-28 08:52:47] -rw-------. 1 boincer umatlas   8509440 Nov 28 08:52 result.tar.gz
08:52:48 (2438556): run_atlas exited; CPU time 196076.384840
08:52:48 (2438556): called boinc_finish(0)

</stderr_txt>
]]>

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