Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:01:49 (4170150): wrapper (7.7.26015): starting
12:01:49 (4170150): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 12:01:49] Arguments: --nthreads 8
[2025-11-27 12:01:49] Threads: 8
[2025-11-27 12:01:49] Checking for CVMFS
[2025-11-27 12:01:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 12:01:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 12:01:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 12:01:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 12:01:49] 2.13.2.0 6869 38340 169904 153375 1 92 31490311 40960000 22304 16776704 0 77090414 99.775 43510084 42438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 12:01:49] CVMFS is ok
[2025-11-27 12:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 12:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 12:01:49] Further information can be found at the LHC@home message board.
[2025-11-27 12:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 12:01:49] Checking for apptainer binary...
[2025-11-27 12:01:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 12:01:49] Running /usr/bin/apptainer --version
[2025-11-27 12:01:49] apptainer version 1.4.4-1.el9
[2025-11-27 12:01:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 12:01:50] c-212-13.aglt2.org
[2025-11-27 12:01:50] apptainer works
[2025-11-27 12:01:50] Set ATHENA_PROC_NUMBER=8
[2025-11-27 12:01:50] Set ATHENA_CORE_NUMBER=8
[2025-11-27 12:01:50] Starting ATLAS job with PandaID=6894247036
[2025-11-27 12:01:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 11:33:56]  *** The last 200 lines of the pilot log: ***
[2025-11-28 11:33:56] 2025-11-28 16:33:18,440 | INFO     | monitor loop #5395: job 0:6894247036 is in state 'finished'
[2025-11-28 11:33:56] 2025-11-28 16:33:18,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:33:56] 2025-11-28 16:33:19,427 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 11:33:56] 2025-11-28 16:33:19,435 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2974.7480833333325
[2025-11-28 11:33:56] 2025-11-28 16:33:19,468 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894247036/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 11:33:56] 2025-11-28 16:33:19,469 | INFO     | extracted standard info from prmon json
[2025-11-28 11:33:56] 2025-11-28 16:33:19,470 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 11:33:56] 2025-11-28 16:33:19,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 11:33:56] 2025-11-28 16:33:19,533 | INFO     | fitting pss+swap vs Time
[2025-11-28 11:33:56] 2025-11-28 16:33:19,538 | INFO     | sum of square deviations: 827370110023.1582
[2025-11-28 11:33:56] 2025-11-28 16:33:19,634 | INFO     | sum of deviations: 4128392036789.0635
[2025-11-28 11:33:56] 2025-11-28 16:33:19,634 | INFO     | mean x: 1764305238.254506
[2025-11-28 11:33:56] 2025-11-28 16:33:19,634 | INFO     | mean y: 2932416.2292718096
[2025-11-28 11:33:56] 2025-11-28 16:33:19,635 | INFO     | intersect: -8800556624.329931
[2025-11-28 11:33:56] 2025-11-28 16:33:19,636 | INFO     | chi2: 10.622719964835863
[2025-11-28 11:33:56] 2025-11-28 16:33:19,641 | INFO     | sum of square deviations: 818454929362.7625
[2025-11-28 11:33:56] 2025-11-28 16:33:19,716 | INFO     | sum of deviations: 4653526533479.758
[2025-11-28 11:33:56] 2025-11-28 16:33:19,717 | INFO     | mean x: 1764305085.759045
[2025-11-28 11:33:56] 2025-11-28 16:33:19,717 | INFO     | mean y: 2941397.8191027497
[2025-11-28 11:33:56] 2025-11-28 16:33:19,717 | INFO     | intersect: -10028448523.829206
[2025-11-28 11:33:56] 2025-11-28 16:33:19,722 | INFO     | chi2: 6.776601471283537
[2025-11-28 11:33:56] 2025-11-28 16:33:19,722 | INFO     | current chi2=6.776601471283537 (change=36.20653190787332 %)
[2025-11-28 11:33:56] 2025-11-28 16:33:19,724 | INFO     | sum of square deviations: 809604028977.308
[2025-11-28 11:33:56] 2025-11-28 16:33:19,806 | INFO     | sum of deviations: 5127819300020.605
[2025-11-28 11:33:56] 2025-11-28 16:33:19,807 | INFO     | mean x: 1764304933.2636166
[2025-11-28 11:33:56] 2025-11-28 16:33:19,807 | INFO     | mean y: 2949566.954248366
[2025-11-28 11:33:56] 2025-11-28 16:33:19,807 | INFO     | intersect: -11171694535.717718
[2025-11-28 11:33:56] 2025-11-28 16:33:19,808 | INFO     | chi2: 3.510461664170049
[2025-11-28 11:33:56] 2025-11-28 16:33:19,808 | INFO     | current chi2=3.510461664170049 (change=48.19731278213794 %)
[2025-11-28 11:33:56] 2025-11-28 16:33:19,809 | INFO     | sum of square deviations: 800817176304.2946
[2025-11-28 11:33:56] 2025-11-28 16:33:19,890 | INFO     | sum of deviations: 5245221478929.532
[2025-11-28 11:33:56] 2025-11-28 16:33:19,890 | INFO     | mean x: 1764304780.7682216
[2025-11-28 11:33:56] 2025-11-28 16:33:19,890 | INFO     | mean y: 2951600.4890670553
[2025-11-28 11:33:56] 2025-11-28 16:33:19,890 | INFO     | intersect: -11552956046.460724
[2025-11-28 11:33:56] 2025-11-28 16:33:19,891 | INFO     | chi2: 3.033170200594152
[2025-11-28 11:33:56] 2025-11-28 16:33:19,892 | INFO     | current chi2=3.033170200594152 (change=13.596259103109709 %)
[2025-11-28 11:33:56] 2025-11-28 16:33:19,892 | INFO     | right removable region: 1371
[2025-11-28 11:33:56] 2025-11-28 16:33:19,897 | INFO     | sum of square deviations: 818453867962.7616
[2025-11-28 11:33:56] 2025-11-28 16:33:19,974 | INFO     | sum of deviations: 3684698077903.82
[2025-11-28 11:33:56] 2025-11-28 16:33:19,974 | INFO     | mean x: 1764305390.759045
[2025-11-28 11:33:56] 2025-11-28 16:33:19,974 | INFO     | mean y: 2940001.6541244574
[2025-11-28 11:33:56] 2025-11-28 16:33:19,974 | INFO     | intersect: -7940003317.004591
[2025-11-28 11:33:56] 2025-11-28 16:33:19,976 | INFO     | chi2: 8.096050173894612
[2025-11-28 11:33:56] 2025-11-28 16:33:19,976 | INFO     | current chi2=8.096050173894612 (change=23.785525734512678 %)
[2025-11-28 11:33:56] 2025-11-28 16:33:19,976 | INFO     | left removable region: 10
[2025-11-28 11:33:56] 2025-11-28 16:33:19,977 | INFO     | sum of square deviations: 781708362831.0153
[2025-11-28 11:33:56] 2025-11-28 16:33:20,055 | INFO     | sum of deviations: 4674092720380.86
[2025-11-28 11:33:56] 2025-11-28 16:33:20,055 | INFO     | mean x: 1764305055.277737
[2025-11-28 11:33:56] 2025-11-28 16:33:20,055 | INFO     | mean y: 2961334.5135929463
[2025-11-28 11:33:56] 2025-11-28 16:33:20,055 | INFO     | intersect: -10546401839.163368
[2025-11-28 11:33:56] 2025-11-28 16:33:20,060 | INFO     | chi2: 0.38991719510282297
[2025-11-28 11:33:56] 2025-11-28 16:33:20,061 | INFO     | current memory leak: 5.98 B/s (using 1361 data points, chi2=0.39)
[2025-11-28 11:33:56] 2025-11-28 16:33:20,062 | INFO     | could have reported an average CPU frequency of 2975 MHz (50 samples)
[2025-11-28 11:33:56] 2025-11-28 16:33:20,062 | INFO     | ..............................
[2025-11-28 11:33:56] 2025-11-28 16:33:20,062 | INFO     | . Timing measurements:
[2025-11-28 11:33:56] 2025-11-28 16:33:20,062 | INFO     | . get job = 0 s
[2025-11-28 11:33:56] 2025-11-28 16:33:20,062 | INFO     | . initial setup = 2 s
[2025-11-28 11:33:56] 2025-11-28 16:33:20,063 | INFO     | . payload setup = 10 s
[2025-11-28 11:33:56] 2025-11-28 16:33:20,063 | INFO     | . stage-in = 0 s
[2025-11-28 11:33:56] 2025-11-28 16:33:20,063 | INFO     | . payload execution = 84592 s
[2025-11-28 11:33:56] 2025-11-28 16:33:20,063 | INFO     | . stage-out = 12 s
[2025-11-28 11:33:56] 2025-11-28 16:33:20,063 | INFO     | . log creation = 3 s
[2025-11-28 11:33:56] 2025-11-28 16:33:20,063 | INFO     | ..............................
[2025-11-28 11:33:56] 2025-11-28 16:33:20,359 | INFO     | 
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | job summary report
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | --------------------------------------------------
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | PanDA job id: 6894247036
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | task id: 47533962
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | errors: (none)
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | pilot state: finished 
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | transexitcode: 0
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | exeerrorcode: 0
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | exeerrordiag: 
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | exitcode: 0
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | exitmsg: OK
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | cpuconsumptiontime: 217989 s
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | nevents: 1000
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | neventsw: 0
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | pid: 4180426
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | pgrp: 4180426
[2025-11-28 11:33:56] 2025-11-28 16:33:20,361 | INFO     | corecount: 8
[2025-11-28 11:33:56] 2025-11-28 16:33:20,362 | INFO     | event service: False
[2025-11-28 11:33:56] 2025-11-28 16:33:20,362 | INFO     | sizes: {0: 2284144, 1: 2284343, 8: 2284605, 12: 2284633, 84607: 2348033, 84608: 2348032, 84620: 2357210, 84622: 2357266, 84653: 2357512}
[2025-11-28 11:33:56] 2025-11-28 16:33:20,362 | INFO     | --------------------------------------------------
[2025-11-28 11:33:56] 2025-11-28 16:33:20,362 | INFO     | 
[2025-11-28 11:33:56] 2025-11-28 16:33:20,362 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 11:33:56] 2025-11-28 16:33:20,425 | INFO     | time since job start (84672s) is within the limit (172800.0s)
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | job 6894247036 has completed (purged errors)
[2025-11-28 11:33:56] 2025-11-28 16:33:20,645 | INFO     | overall cleanup function is called
[2025-11-28 11:33:56] 2025-11-28 16:33:21,762 | INFO     | --- collectZombieJob: --- 10, [4180426]
[2025-11-28 11:33:56] 2025-11-28 16:33:21,762 | INFO     | zombie collector waiting for pid 4180426
[2025-11-28 11:33:56] 2025-11-28 16:33:21,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 11:33:56] 2025-11-28 16:33:21,763 | INFO     | collected zombie processes
[2025-11-28 11:33:56] 2025-11-28 16:33:21,763 | INFO     | will attempt to kill all subprocesses of pid=4180426
[2025-11-28 11:33:56] 2025-11-28 16:33:22,936 | INFO     | process IDs to be killed: [4180426] (in reverse order)
[2025-11-28 11:33:56] 2025-11-28 16:33:23,277 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 11:33:56] 2025-11-28 16:33:23,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 11:33:56] 2025-11-28 16:33:23,313 | INFO     | did not find any defunct processes belonging to 4180426
[2025-11-28 11:33:56] 2025-11-28 16:33:23,348 | INFO     | did not find any defunct processes belonging to 4180426
[2025-11-28 11:33:56] 2025-11-28 16:33:23,357 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 11:33:56] 2025-11-28 16:33:23,357 | INFO     | ready for new job
[2025-11-28 11:33:56] 2025-11-28 16:33:23,357 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 11:33:56] 2025-11-28 16:33:23,396 | INFO     | ***************************************
[2025-11-28 11:33:56] 2025-11-28 16:33:23,396 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 11:33:56] 2025-11-28 16:33:23,396 | INFO     | ***************************************
[2025-11-28 11:33:56] 2025-11-28 16:33:23,396 | INFO     | 
[2025-11-28 11:33:56] 2025-11-28 16:33:23,407 | INFO     | architecture information:
[2025-11-28 11:33:56] 2025-11-28 16:33:23,439 | INFO     | executing command: cat /etc/os-release
[2025-11-28 11:33:56] 2025-11-28 16:33:23,504 | INFO     | cat /etc/os-release:
[2025-11-28 11:33:56] NAME="CentOS Linux"
[2025-11-28 11:33:56] VERSION="7 (Core)"
[2025-11-28 11:33:56] ID="centos"
[2025-11-28 11:33:56] ID_LIKE="rhel fedora"
[2025-11-28 11:33:56] VERSION_ID="7"
[2025-11-28 11:33:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 11:33:56] ANSI_COLOR="0;31"
[2025-11-28 11:33:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 11:33:56] HOME_URL="https://www.centos.org/"
[2025-11-28 11:33:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 11:33:56] 
[2025-11-28 11:33:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 11:33:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 11:33:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 11:33:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 11:33:56] 
[2025-11-28 11:33:56] 2025-11-28 16:33:23,505 | INFO     | ***************************************
[2025-11-28 11:33:56] 2025-11-28 16:33:24,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 11:33:56] 2025-11-28 16:33:24,140 | INFO     | sufficient remaining disk space (120627134464 B)
[2025-11-28 11:33:56] 2025-11-28 16:33:24,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 11:33:56] 2025-11-28 16:33:24,140 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 11:33:56] 2025-11-28 16:33:24,140 | INFO     | update_server=False
[2025-11-28 11:33:56] 2025-11-28 16:33:24,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 11:33:56] 2025-11-28 16:33:24,357 | INFO     | all job control threads have been joined
[2025-11-28 11:33:56] 2025-11-28 16:33:24,414 | INFO     | all data control threads have been joined
[2025-11-28 11:33:56] 2025-11-28 16:33:24,459 | INFO     | all payload control threads have been joined
[2025-11-28 11:33:56] 2025-11-28 16:33:24,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:33:56] 2025-11-28 16:33:24,464 | INFO     | aborting loop
[2025-11-28 11:33:56] 2025-11-28 16:33:25,146 | INFO     | [job] retrieve thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:25,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:33:56] 2025-11-28 16:33:25,363 | INFO     | [job] control thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:25,405 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:25,420 | INFO     | [data] control thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:25,465 | INFO     | [payload] control thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:25,469 | INFO     | [data] copytool_in thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:25,474 | INFO     | [job] job monitor thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:25,502 | INFO     | [payload] failed_post thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:25,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 11:33:56] 2025-11-28 16:33:26,105 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:26,156 | INFO     | [payload] validate_post thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:26,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 11:33:56] 2025-11-28 16:33:26,265 | INFO     | [job] queue monitor thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:26,331 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:26,332 | INFO     | [job] validate thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:26,472 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:27,620 | INFO     | [data] copytool_out thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:30,253 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 11:33:56] 2025-11-28 16:33:35,242 | INFO     | [monitor] cgroup control has ended
[2025-11-28 11:33:56] 2025-11-28 16:33:37,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345358575424)>', '<ExcThread(monitor, started 140345010538240)>']
[2025-11-28 11:33:56] 2025-11-28 16:33:42,216 | INFO     | all workflow threads have been joined
[2025-11-28 11:33:56] 2025-11-28 16:33:42,217 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 11:33:56] 2025-11-28 16:33:42,217 | INFO     | traces error code: 0
[2025-11-28 11:33:56] 2025-11-28 16:33:42,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 11:33:56] 2025-11-28 16:33:54,824 | INFO     | PID=4173863 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 11:33:56] 2025-11-28 16:33:54,824 | INFO     | .. there are 19 such processes running
[2025-11-28 11:33:56] 2025-11-28 16:33:54,828 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 11:33:56] 2025-11-28 16:33:54,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 11:33:56] 2025-11-28 16:33:54,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 11:33:56] 2025-11-28 16:33:54,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 11:33:56] 2025-11-28 16:33:54,829 | INFO     | [monitor] control thread has ended
[2025-11-28 11:33:56] 2025-11-28 16:33:55,718 [wrapper] ==== pilot stdout END ====
[2025-11-28 11:33:56] 2025-11-28 16:33:55,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 11:33:56] 2025-11-28 16:33:55,804 [wrapper] pilotpid: 4173863
[2025-11-28 11:33:56] 2025-11-28 16:33:55,847 [wrapper] Pilot exit status: 0
[2025-11-28 11:33:56] 2025-11-28 16:33:56,050 [wrapper] pandaids: 6894247036
[2025-11-28 11:33:56] 2025-11-28 16:33:56,170 [wrapper] cleanup supervisor_pilot 3323811 4173864
[2025-11-28 11:33:56] 2025-11-28 16:33:56,184 [wrapper] Test setup, not cleaning
[2025-11-28 11:33:56] 2025-11-28 16:33:56,197 [wrapper] apfmon messages muted
[2025-11-28 11:33:56] 2025-11-28 16:33:56,211 [wrapper] ==== wrapper stdout END ====
[2025-11-28 11:33:56] 2025-11-28 16:33:56,233 [wrapper] ==== wrapper stderr END ====
[2025-11-28 11:33:56]  *** Error codes and diagnostics ***
[2025-11-28 11:33:56]     "exeErrorCode": 0,
[2025-11-28 11:33:56]     "exeErrorDiag": "",
[2025-11-28 11:33:56]     "pilotErrorCode": 0,
[2025-11-28 11:33:56]     "pilotErrorDiag": "",
[2025-11-28 11:33:56]  *** Listing of results directory ***
[2025-11-28 11:33:56] total 1321192
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-28 11:33:56] -rwx------. 1 boincer umatlas     36292 Nov 26 20:28 runpilot2-wrapper.sh
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 20:31 queuedata.json
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas       100 Nov 27 12:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 11:33:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 12:01 run_atlas
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas       105 Nov 27 12:01 job.xml
[2025-11-28 11:33:56] -rw-r--r--. 2 boincer umatlas 407229137 Nov 27 12:01 EVNT.47493127._001031.pool.root.1
[2025-11-28 11:33:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 12:01 start_atlas.sh
[2025-11-28 11:33:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 12:01 shared
[2025-11-28 11:33:56] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 12:01 input.tar.gz
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas         0 Nov 27 12:01 boinc_lockfile
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 12:01 pandaJob.out
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas        57 Nov 27 12:01 setup.sh.local
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas    991564 Nov 27 12:02 agis_schedconf.cvmfs.json
[2025-11-28 11:33:56] drwx------. 5 boincer umatlas      4096 Nov 27 12:02 pilot3
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas       533 Nov 28 11:17 boinc_task_state.xml
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas      6948 Nov 28 11:27 init_data.xml
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas 914705461 Nov 28 11:30 HITS.47533962._000307.pool.root.1
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas      1058 Nov 28 11:32 memory_monitor_summary.json
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas   1516240 Nov 28 11:32 agis_ddmendpoints.agis.ALL.json
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas   2453478 Nov 28 11:32 log.47533962._000307.job.log.tgz.1
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas      7916 Nov 28 11:33 heartbeat.json
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 11:33 boinc_mmap_file
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas        29 Nov 28 11:33 wrapper_checkpoint.txt
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas        95 Nov 28 11:33 pilot_heartbeat.json
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas       823 Nov 28 11:33 pilotlog.txt
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas  11070707 Nov 28 11:33 log.47533962._000307.job.log.1
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas       353 Nov 28 11:33 output.list
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas       620 Nov 28 11:33 runtime_log
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas  13547520 Nov 28 11:33 result.tar.gz
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas      9343 Nov 28 11:33 runtime_log.err
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas       660 Nov 28 11:33 rnwMDmmzfi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWTKKDmfUadDn.diag
[2025-11-28 11:33:56] -rw-r--r--. 1 boincer umatlas     21352 Nov 28 11:33 stderr.txt
[2025-11-28 11:33:56] HITS file was successfully produced:
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas 914705461 Nov 28 11:30 shared/HITS.pool.root.1
[2025-11-28 11:33:56]  *** Contents of shared directory: ***
[2025-11-28 11:33:56] total 1304792
[2025-11-28 11:33:56] -rw-r--r--. 2 boincer umatlas 407229137 Nov 27 12:01 ATLAS.root_0
[2025-11-28 11:33:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 12:01 start_atlas.sh
[2025-11-28 11:33:56] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 12:01 input.tar.gz
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas 914705461 Nov 28 11:30 HITS.pool.root.1
[2025-11-28 11:33:56] -rw-------. 1 boincer umatlas  13547520 Nov 28 11:33 result.tar.gz
11:34:18 (4170150): run_atlas exited; CPU time 219284.747602
11:34:18 (4170150): called boinc_finish(0)

</stderr_txt>
]]>

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