Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:06:31 (2139877): wrapper (7.7.26015): starting
14:06:31 (2139877): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 14:06:31] Arguments: --nthreads 8
[2025-11-27 14:06:31] Threads: 8
[2025-11-27 14:06:31] Checking for CVMFS
[2025-11-27 14:06:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 14:06:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 14:06:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 14:06:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 14:06:32] 2.13.3.0 22787 31837 268776 153379 2 973 35145380 40960001 59216 16776704 0 464263524 99.751 280981012 47564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 14:06:32] CVMFS is ok
[2025-11-27 14:06:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 14:06:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 14:06:32] Further information can be found at the LHC@home message board.
[2025-11-27 14:06:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 14:06:32] Checking for apptainer binary...
[2025-11-27 14:06:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 14:06:32] Running /usr/bin/apptainer --version
[2025-11-27 14:06:32] apptainer version 1.4.4-1.el9
[2025-11-27 14:06:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 14:06:32] c8-6-11.aglt2.org
[2025-11-27 14:06:32] apptainer works
[2025-11-27 14:06:32] Set ATHENA_PROC_NUMBER=8
[2025-11-27 14:06:32] Set ATHENA_CORE_NUMBER=8
[2025-11-27 14:06:33] Starting ATLAS job with PandaID=6894239566
[2025-11-27 14:06:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:17:51]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:17:51] 2025-11-28 06:16:38,634 | INFO     | monitor loop #2266: job 0:6894239566 is in state 'finished'
[2025-11-28 01:17:51] 2025-11-28 06:16:38,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:17:51] 2025-11-28 06:16:41,144 | INFO     | monitor loop #2267: job 0:6894239566 is in state 'finished'
[2025-11-28 01:17:51] 2025-11-28 06:16:41,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:17:51] 2025-11-28 06:16:43,782 | INFO     | monitor loop #2268: job 0:6894239566 is in state 'finished'
[2025-11-28 01:17:51] 2025-11-28 06:16:43,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:17:51] 2025-11-28 06:16:46,357 | INFO     | monitor loop #2269: job 0:6894239566 is in state 'finished'
[2025-11-28 01:17:51] 2025-11-28 06:16:46,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:17:51] 2025-11-28 06:16:46,625 | INFO     | PID=2144541 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:17:51] 2025-11-28 06:16:46,625 | INFO     | .. there are 92 such processes running
[2025-11-28 01:17:51] 2025-11-28 06:16:47,626 | INFO     | time since job start (40192s) is within the limit (172800.0s)
[2025-11-28 01:17:51] 2025-11-28 06:16:48,862 | INFO     | monitor loop #2270: job 0:6894239566 is in state 'finished'
[2025-11-28 01:17:51] 2025-11-28 06:16:48,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:17:51] 2025-11-28 06:16:49,633 | INFO     | time since job start (40194s) is within the limit (172800.0s)
[2025-11-28 01:17:51] 2025-11-28 06:16:51,379 | INFO     | monitor loop #2271: job 0:6894239566 is in state 'finished'
[2025-11-28 01:17:51] 2025-11-28 06:16:51,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:17:51] 2025-11-28 06:16:51,640 | INFO     | time since job start (40196s) is within the limit (172800.0s)
[2025-11-28 01:17:51] 2025-11-28 06:16:52,453 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 01:17:51] 2025-11-28 06:16:52,467 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.11534375
[2025-11-28 01:17:51] 2025-11-28 06:16:52,560 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894239566/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:17:51] 2025-11-28 06:16:52,562 | INFO     | extracted standard info from prmon json
[2025-11-28 01:17:51] 2025-11-28 06:16:52,562 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:17:51] 2025-11-28 06:16:52,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:17:51] 2025-11-28 06:16:52,590 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:17:51] 2025-11-28 06:16:52,590 | INFO     | sum of square deviations: 87940103761.83553
[2025-11-28 01:17:51] 2025-11-28 06:16:52,614 | INFO     | sum of deviations: -699818762024.8488
[2025-11-28 01:17:51] 2025-11-28 06:16:52,617 | INFO     | mean x: 1764290475.1917808
[2025-11-28 01:17:51] 2025-11-28 06:16:52,617 | INFO     | mean y: 2754251.3242009133
[2025-11-28 01:17:51] 2025-11-28 06:16:52,617 | INFO     | intersect: 14042805642.948502
[2025-11-28 01:17:51] 2025-11-28 06:16:52,617 | INFO     | chi2: 29.493309514214033
[2025-11-28 01:17:51] 2025-11-28 06:16:52,618 | INFO     | sum of square deviations: 85947837473.08041
[2025-11-28 01:17:51] 2025-11-28 06:16:52,622 | INFO     | sum of deviations: -488600918900.2388
[2025-11-28 01:17:51] 2025-11-28 06:16:52,622 | INFO     | mean x: 1764290322.6993866
[2025-11-28 01:17:51] 2025-11-28 06:16:52,622 | INFO     | mean y: 2770413.1518404908
[2025-11-28 01:17:51] 2025-11-28 06:16:52,622 | INFO     | intersect: 10032503542.24558
[2025-11-28 01:17:51] 2025-11-28 06:16:52,623 | INFO     | chi2: 25.700257529817716
[2025-11-28 01:17:51] 2025-11-28 06:16:52,623 | INFO     | current chi2=25.700257529817716 (change=12.860720098462638 %)
[2025-11-28 01:17:51] 2025-11-28 06:16:52,623 | INFO     | right removable region: 651
[2025-11-28 01:17:51] 2025-11-28 06:16:52,623 | INFO     | sum of square deviations: 85947399674.67946
[2025-11-28 01:17:51] 2025-11-28 06:16:52,628 | INFO     | sum of deviations: -852092292875.5795
[2025-11-28 01:17:51] 2025-11-28 06:16:52,628 | INFO     | mean x: 1764290627.7009203
[2025-11-28 01:17:51] 2025-11-28 06:16:52,628 | INFO     | mean y: 2765873.9662576686
[2025-11-28 01:17:51] 2025-11-28 06:16:52,628 | INFO     | intersect: 17494143762.61533
[2025-11-28 01:17:51] 2025-11-28 06:16:52,629 | INFO     | chi2: 27.553768530128508
[2025-11-28 01:17:51] 2025-11-28 06:16:52,629 | INFO     | current chi2=27.553768530128508 (change=6.576206658499213 %)
[2025-11-28 01:17:51] 2025-11-28 06:16:52,629 | INFO     | left removable region: 10
[2025-11-28 01:17:51] 2025-11-28 06:16:52,629 | INFO     | sum of square deviations: 81670523864.29008
[2025-11-28 01:17:51] 2025-11-28 06:16:52,634 | INFO     | sum of deviations: -622863709710.0266
[2025-11-28 01:17:51] 2025-11-28 06:16:52,634 | INFO     | mean x: 1764290597.2152886
[2025-11-28 01:17:51] 2025-11-28 06:16:52,634 | INFO     | mean y: 2787840.8190327613
[2025-11-28 01:17:51] 2025-11-28 06:16:52,634 | INFO     | intersect: 13458224813.576416
[2025-11-28 01:17:51] 2025-11-28 06:16:52,634 | INFO     | chi2: 22.87865367821707
[2025-11-28 01:17:51] 2025-11-28 06:16:52,634 | INFO     | current memory leak: -7.63 B/s (using 641 data points, chi2=22.88)
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | could have reported an average CPU frequency of 3797 MHz (25 samples)
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | ..............................
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | . Timing measurements:
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | . get job = 0 s
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | . initial setup = 2 s
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | . payload setup = 16 s
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | . stage-in = 0 s
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | . payload execution = 40084 s
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | . stage-out = 11 s
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | . log creation = 4 s
[2025-11-28 01:17:51] 2025-11-28 06:16:52,635 | INFO     | ..............................
[2025-11-28 01:17:51] 2025-11-28 06:16:52,689 | INFO     | 
[2025-11-28 01:17:51] 2025-11-28 06:16:52,692 | INFO     | job summary report
[2025-11-28 01:17:51] 2025-11-28 06:16:52,692 | INFO     | --------------------------------------------------
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | PanDA job id: 6894239566
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | task id: 47533962
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | errors: (none)
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | pilot state: finished 
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | transexitcode: 0
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | exeerrorcode: 0
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | exeerrordiag: 
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | exitcode: 0
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | exitmsg: OK
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | cpuconsumptiontime: 136912 s
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | nevents: 1000
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | neventsw: 0
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | pid: 2156972
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | pgrp: 2156972
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | corecount: 8
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | event service: False
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | sizes: {0: 2284315, 8: 2284577, 11: 2284605, 40103: 2327582, 40115: 2336576, 40116: 2336632, 40175: 2337070}
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | --------------------------------------------------
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | 
[2025-11-28 01:17:51] 2025-11-28 06:16:52,693 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-28 01:17:51] 2025-11-28 06:16:53,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,023 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:17:51] 2025-11-28 06:16:53,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:17:51] 2025-11-28 06:16:53,024 | INFO     | job 6894239566 has completed (purged errors)
[2025-11-28 01:17:51] 2025-11-28 06:16:53,024 | INFO     | overall cleanup function is called
[2025-11-28 01:17:51] 2025-11-28 06:16:54,048 | INFO     | --- collectZombieJob: --- 10, [2156972]
[2025-11-28 01:17:51] 2025-11-28 06:16:54,048 | INFO     | zombie collector waiting for pid 2156972
[2025-11-28 01:17:51] 2025-11-28 06:16:54,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:17:51] 2025-11-28 06:16:54,048 | INFO     | collected zombie processes
[2025-11-28 01:17:51] 2025-11-28 06:16:54,048 | INFO     | will attempt to kill all subprocesses of pid=2156972
[2025-11-28 01:17:51] 2025-11-28 06:16:56,234 | INFO     | process IDs to be killed: [2156972] (in reverse order)
[2025-11-28 01:17:51] 2025-11-28 06:16:58,501 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:17:51] 2025-11-28 06:16:58,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:17:51] 2025-11-28 06:16:58,645 | INFO     | did not find any defunct processes belonging to 2156972
[2025-11-28 01:17:51] 2025-11-28 06:16:58,729 | INFO     | did not find any defunct processes belonging to 2156972
[2025-11-28 01:17:51] 2025-11-28 06:16:58,752 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:17:51] 2025-11-28 06:16:58,752 | INFO     | ready for new job
[2025-11-28 01:17:51] 2025-11-28 06:16:58,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:17:51] 2025-11-28 06:16:58,755 | INFO     | ***************************************
[2025-11-28 01:17:51] 2025-11-28 06:16:58,755 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:17:51] 2025-11-28 06:16:58,755 | INFO     | ***************************************
[2025-11-28 01:17:51] 2025-11-28 06:16:58,755 | INFO     | 
[2025-11-28 01:17:51] 2025-11-28 06:16:58,766 | INFO     | architecture information:
[2025-11-28 01:17:51] 2025-11-28 06:16:58,770 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:17:51] 2025-11-28 06:16:58,832 | INFO     | cat /etc/os-release:
[2025-11-28 01:17:51] NAME="CentOS Linux"
[2025-11-28 01:17:51] VERSION="7 (Core)"
[2025-11-28 01:17:51] ID="centos"
[2025-11-28 01:17:51] ID_LIKE="rhel fedora"
[2025-11-28 01:17:51] VERSION_ID="7"
[2025-11-28 01:17:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:17:51] ANSI_COLOR="0;31"
[2025-11-28 01:17:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:17:51] HOME_URL="https://www.centos.org/"
[2025-11-28 01:17:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:17:51] 
[2025-11-28 01:17:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:17:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:17:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:17:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:17:51] 
[2025-11-28 01:17:51] 2025-11-28 06:16:58,832 | INFO     | ***************************************
[2025-11-28 01:17:51] 2025-11-28 06:16:59,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-28 01:17:51] 2025-11-28 06:16:59,458 | INFO     | sufficient remaining disk space (155484946432 B)
[2025-11-28 01:17:51] 2025-11-28 06:16:59,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:17:51] 2025-11-28 06:16:59,458 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:17:51] 2025-11-28 06:16:59,459 | INFO     | update_server=False
[2025-11-28 01:17:51] 2025-11-28 06:16:59,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:17:51] 2025-11-28 06:16:59,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:17:51] 2025-11-28 06:16:59,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:17:51] 2025-11-28 06:16:59,755 | INFO     | all data control threads have been joined
[2025-11-28 01:17:51] 2025-11-28 06:16:59,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:17:51] 2025-11-28 06:16:59,974 | INFO     | aborting loop
[2025-11-28 01:17:51] 2025-11-28 06:17:00,130 | INFO     | all job control threads have been joined
[2025-11-28 01:17:51] 2025-11-28 06:17:00,465 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:00,517 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:00,761 | INFO     | [data] control thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:00,830 | INFO     | [job] validate thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:00,834 | INFO     | all payload control threads have been joined
[2025-11-28 01:17:51] 2025-11-28 06:17:00,981 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,136 | INFO     | [job] control thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,140 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,321 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,467 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,467 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:17:51] 2025-11-28 06:17:01,840 | INFO     | [payload] control thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,926 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,931 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:01,953 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:02,751 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:03,484 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:17:51] 2025-11-28 06:17:05,417 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:17:51] 2025-11-28 06:17:05,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763022174016)>', '<ExcThread(monitor, started 139762371380992)>']
[2025-11-28 01:17:51] 2025-11-28 06:17:10,481 | INFO     | all workflow threads have been joined
[2025-11-28 01:17:51] 2025-11-28 06:17:10,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:17:51] 2025-11-28 06:17:10,481 | INFO     | traces error code: 0
[2025-11-28 01:17:51] 2025-11-28 06:17:10,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:17:51] 2025-11-28 06:17:26,378 | INFO     | PID=2144541 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:17:51] 2025-11-28 06:17:26,378 | INFO     | .. there are 92 such processes running
[2025-11-28 01:17:51] 2025-11-28 06:17:26,379 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:17:51] 2025-11-28 06:17:26,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:17:51] 2025-11-28 06:17:26,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:17:51] 2025-11-28 06:17:26,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:17:51] 2025-11-28 06:17:26,379 | INFO     | [monitor] control thread has ended
[2025-11-28 01:17:51] 2025-11-28 06:17:29,481 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:17:51] 2025-11-28 06:17:29,658 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:17:51] 2025-11-28 06:17:29,689 [wrapper] pilotpid: 2144541
[2025-11-28 01:17:51] 2025-11-28 06:17:29,711 [wrapper] Pilot exit status: 0
[2025-11-28 01:17:51] 2025-11-28 06:17:29,875 [wrapper] pandaids: 6894239566
[2025-11-28 01:17:51] 2025-11-28 06:17:30,283 [wrapper] cleanup supervisor_pilot 3047668 2144542
[2025-11-28 01:17:51] 2025-11-28 06:17:30,302 [wrapper] Test setup, not cleaning
[2025-11-28 01:17:51] 2025-11-28 06:17:30,323 [wrapper] apfmon messages muted
[2025-11-28 01:17:51] 2025-11-28 06:17:30,382 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:17:51] 2025-11-28 06:17:30,396 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:17:51]  *** Error codes and diagnostics ***
[2025-11-28 01:17:51]     "exeErrorCode": 0,
[2025-11-28 01:17:51]     "exeErrorDiag": "",
[2025-11-28 01:17:51]     "pilotErrorCode": 0,
[2025-11-28 01:17:51]     "pilotErrorDiag": "",
[2025-11-28 01:17:51]  *** Listing of results directory ***
[2025-11-28 01:17:51] total 1313136
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-28 01:17:51] -rwx------. 1 boincer umatlas     36292 Nov 26 20:28 runpilot2-wrapper.sh
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 20:30 queuedata.json
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas       100 Nov 27 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:17:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 14:06 run_atlas
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas       105 Nov 27 14:06 job.xml
[2025-11-28 01:17:51] -rw-r--r--. 2 boincer umatlas 410726312 Nov 27 14:06 EVNT.47493127._001014.pool.root.1
[2025-11-28 01:17:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 14:06 start_atlas.sh
[2025-11-28 01:17:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 14:06 shared
[2025-11-28 01:17:51] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 14:06 input.tar.gz
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas         0 Nov 27 14:06 boinc_lockfile
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 14:06 pandaJob.out
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas        57 Nov 27 14:06 setup.sh.local
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas    991223 Nov 27 14:06 agis_schedconf.cvmfs.json
[2025-11-28 01:17:51] drwx------. 5 boincer umatlas      4096 Nov 27 14:06 pilot3
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas       533 Nov 28 00:33 boinc_task_state.xml
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas      7174 Nov 28 01:12 init_data.xml
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas 916536433 Nov 28 01:14 HITS.47533962._000133.pool.root.1
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas      1052 Nov 28 01:15 memory_monitor_summary.json
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas   1516240 Nov 28 01:15 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas   1854153 Nov 28 01:15 log.47533962._000133.job.log.tgz.1
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas      8583 Nov 28 01:16 heartbeat.json
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas       823 Nov 28 01:17 pilotlog.txt
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas        95 Nov 28 01:17 pilot_heartbeat.json
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas   4882837 Nov 28 01:17 log.47533962._000133.job.log.1
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas       353 Nov 28 01:17 output.list
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas       620 Nov 28 01:17 runtime_log
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas   6758400 Nov 28 01:17 result.tar.gz
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas      9338 Nov 28 01:17 runtime_log.err
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas       659 Nov 28 01:17 9V0KDmczfi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbSKKDm8b5Ojm.diag
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas        29 Nov 28 01:17 wrapper_checkpoint.txt
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 01:17 boinc_mmap_file
[2025-11-28 01:17:51] -rw-r--r--. 1 boincer umatlas     21857 Nov 28 01:17 stderr.txt
[2025-11-28 01:17:51] HITS file was successfully produced:
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas 916536433 Nov 28 01:14 shared/HITS.pool.root.1
[2025-11-28 01:17:51]  *** Contents of shared directory: ***
[2025-11-28 01:17:51] total 1303360
[2025-11-28 01:17:51] -rw-r--r--. 2 boincer umatlas 410726312 Nov 27 14:06 ATLAS.root_0
[2025-11-28 01:17:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 14:06 start_atlas.sh
[2025-11-28 01:17:51] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 14:06 input.tar.gz
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas 916536433 Nov 28 01:14 HITS.pool.root.1
[2025-11-28 01:17:51] -rw-------. 1 boincer umatlas   6758400 Nov 28 01:17 result.tar.gz
01:17:52 (2139877): run_atlas exited; CPU time 137656.760974
01:17:52 (2139877): called boinc_finish(0)

</stderr_txt>
]]>

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