Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:06:06 (24251): wrapper (7.7.26015): starting
16:06:06 (24251): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 16:06:06] Arguments: --nthreads 8
[2025-11-29 16:06:06] Threads: 8
[2025-11-29 16:06:06] Checking for CVMFS
[2025-11-29 16:06:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 16:06:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 16:06:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 16:06:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 16:06:10] 2.11.2.0 4250 87355 90264 153445 1 85 13857548 25165824 2504 130560 19 24482475 99.890 15161148 1739 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-29 16:06:10] CVMFS is ok
[2025-11-29 16:06:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 16:06:10] Checking for apptainer binary...
[2025-11-29 16:06:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 16:06:10] Running /usr/bin/apptainer --version
[2025-11-29 16:06:10] apptainer version 1.3.2-1.el7
[2025-11-29 16:06:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 16:06:43] cg-vwn215.simple-grid.lan
[2025-11-29 16:06:43] apptainer works
[2025-11-29 16:06:43] Set ATHENA_PROC_NUMBER=8
[2025-11-29 16:06:43] Set ATHENA_CORE_NUMBER=8
[2025-11-29 16:06:43] Starting ATLAS job with PandaID=6899424665
[2025-11-29 16:06:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 15:48:12]  *** The last 200 lines of the pilot log: ***
[2025-11-30 15:48:12] 2025-11-30 14:47:24,381 | INFO     | time since job start (85023s) is within the limit (172800.0s)
[2025-11-30 15:48:12] 2025-11-30 14:47:26,197 | INFO     | monitor loop #5711: job 0:6899424665 is in state 'finished'
[2025-11-30 15:48:12] 2025-11-30 14:47:26,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 15:48:12] 2025-11-30 14:47:26,388 | INFO     | time since job start (85025s) is within the limit (172800.0s)
[2025-11-30 15:48:12] 2025-11-30 14:47:28,398 | INFO     | time since job start (85027s) is within the limit (172800.0s)
[2025-11-30 15:48:12] 2025-11-30 14:47:28,712 | INFO     | monitor loop #5712: job 0:6899424665 is in state 'finished'
[2025-11-30 15:48:12] 2025-11-30 14:47:28,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 15:48:12] 2025-11-30 14:47:30,406 | INFO     | time since job start (85029s) is within the limit (172800.0s)
[2025-11-30 15:48:12] 2025-11-30 14:47:31,217 | INFO     | monitor loop #5713: job 0:6899424665 is in state 'finished'
[2025-11-30 15:48:12] 2025-11-30 14:47:31,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 15:48:12] 2025-11-30 14:47:32,416 | INFO     | time since job start (85031s) is within the limit (172800.0s)
[2025-11-30 15:48:12] 2025-11-30 14:47:33,727 | INFO     | monitor loop #5714: job 0:6899424665 is in state 'finished'
[2025-11-30 15:48:12] 2025-11-30 14:47:33,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 15:48:12] 2025-11-30 14:47:34,421 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 15:48:12] 2025-11-30 14:47:34,424 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-30 15:48:12] 2025-11-30 14:47:34,427 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6899424665/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 15:48:12] 2025-11-30 14:47:34,428 | INFO     | extracted standard info from prmon json
[2025-11-30 15:48:12] 2025-11-30 14:47:34,428 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 15:48:12] 2025-11-30 14:47:34,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 15:48:12] 2025-11-30 14:47:34,483 | INFO     | time since job start (85033s) is within the limit (172800.0s)
[2025-11-30 15:48:12] 2025-11-30 14:47:34,492 | INFO     | fitting pss+swap vs Time
[2025-11-30 15:48:12] 2025-11-30 14:47:34,494 | INFO     | sum of square deviations: 823810294341.0284
[2025-11-30 15:48:12] 2025-11-30 14:47:34,550 | INFO     | sum of deviations: 2960909250124.89
[2025-11-30 15:48:12] 2025-11-30 14:47:34,551 | INFO     | mean x: 1764471710.103971
[2025-11-30 15:48:12] 2025-11-30 14:47:34,551 | INFO     | mean y: 2830046.38267148
[2025-11-30 15:48:12] 2025-11-30 14:47:34,551 | INFO     | intersect: -6338970540.376926
[2025-11-30 15:48:12] 2025-11-30 14:47:34,553 | INFO     | chi2: 26.06899625611527
[2025-11-30 15:48:12] 2025-11-30 14:47:34,555 | INFO     | sum of square deviations: 814920789344.9124
[2025-11-30 15:48:12] 2025-11-30 14:47:34,612 | INFO     | sum of deviations: 3410584708729.684
[2025-11-30 15:48:12] 2025-11-30 14:47:34,612 | INFO     | mean x: 1764471557.607971
[2025-11-30 15:48:12] 2025-11-30 14:47:34,613 | INFO     | mean y: 2837759.4282608693
[2025-11-30 15:48:12] 2025-11-30 14:47:34,613 | INFO     | intersect: -7381781447.800169
[2025-11-30 15:48:12] 2025-11-30 14:47:34,615 | INFO     | chi2: 22.92940367933261
[2025-11-30 15:48:12] 2025-11-30 14:47:34,615 | INFO     | current chi2=22.92940367933261 (change=12.043396477323807 %)
[2025-11-30 15:48:12] 2025-11-30 14:47:34,615 | INFO     | right removable region: 1379
[2025-11-30 15:48:12] 2025-11-30 14:47:34,617 | INFO     | sum of square deviations: 814919856654.9125
[2025-11-30 15:48:12] 2025-11-30 14:47:34,679 | INFO     | sum of deviations: 2367927889270.2373
[2025-11-30 15:48:12] 2025-11-30 14:47:34,679 | INFO     | mean x: 1764471862.607971
[2025-11-30 15:48:12] 2025-11-30 14:47:34,679 | INFO     | mean y: 2840218.0688405796
[2025-11-30 15:48:12] 2025-11-30 14:47:34,679 | INFO     | intersect: -5124218718.073024
[2025-11-30 15:48:12] 2025-11-30 14:47:34,681 | INFO     | chi2: 21.099698318658604
[2025-11-30 15:48:12] 2025-11-30 14:47:34,681 | INFO     | current chi2=21.099698318658604 (change=19.06209924093632 %)
[2025-11-30 15:48:12] 2025-11-30 14:47:34,681 | INFO     | left removable region: 10
[2025-11-30 15:48:12] 2025-11-30 14:47:34,683 | INFO     | sum of square deviations: 795587624645.3009
[2025-11-30 15:48:12] 2025-11-30 14:47:34,755 | INFO     | sum of deviations: 2383717640517.156
[2025-11-30 15:48:12] 2025-11-30 14:47:34,756 | INFO     | mean x: 1764471832.1168737
[2025-11-30 15:48:12] 2025-11-30 14:47:34,756 | INFO     | mean y: 2859000.699050402
[2025-11-30 15:48:12] 2025-11-30 14:47:34,756 | INFO     | intersect: -5283802709.615752
[2025-11-30 15:48:12] 2025-11-30 14:47:34,758 | INFO     | chi2: 13.260301752350125
[2025-11-30 15:48:12] 2025-11-30 14:47:34,758 | INFO     | current memory leak: 3.00 B/s (using 1369 data points, chi2=13.26)
[2025-11-30 15:48:12] 2025-11-30 14:47:34,759 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-30 15:48:12] 2025-11-30 14:47:34,759 | INFO     | ..............................
[2025-11-30 15:48:12] 2025-11-30 14:47:34,759 | INFO     | . Timing measurements:
[2025-11-30 15:48:12] 2025-11-30 14:47:34,760 | INFO     | . get job = 0 s
[2025-11-30 15:48:12] 2025-11-30 14:47:34,760 | INFO     | . initial setup = 4 s
[2025-11-30 15:48:12] 2025-11-30 14:47:34,760 | INFO     | . payload setup = 147 s
[2025-11-30 15:48:12] 2025-11-30 14:47:34,760 | INFO     | . stage-in = 0 s
[2025-11-30 15:48:12] 2025-11-30 14:47:34,760 | INFO     | . payload execution = 84607 s
[2025-11-30 15:48:12] 2025-11-30 14:47:34,760 | INFO     | . stage-out = 4 s
[2025-11-30 15:48:12] 2025-11-30 14:47:34,760 | INFO     | . log creation = 1 s
[2025-11-30 15:48:12] 2025-11-30 14:47:34,760 | INFO     | ..............................
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | 
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | job summary report
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | --------------------------------------------------
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | PanDA job id: 6899424665
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | task id: 47556173
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | errors: (none)
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | pilot state: finished 
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | transexitcode: 0
[2025-11-30 15:48:12] 2025-11-30 14:47:35,217 | INFO     | exeerrorcode: 0
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | exeerrordiag: 
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | exitcode: 0
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | exitmsg: OK
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | cpuconsumptiontime: 317850 s
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | nevents: 1000
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | neventsw: 0
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | pid: 2261
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | pgrp: 2261
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | corecount: 8
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | event service: False
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | sizes: {0: 2283488, 1: 2284174, 2: 2284373, 13: 2284373, 23: 2284429, 34: 2284457, 45: 2284613, 55: 2284641, 66: 2284669, 77: 2284697, 81: 2285015, 88: 2285323, 84
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | --------------------------------------------------
[2025-11-30 15:48:12] 2025-11-30 14:47:35,218 | INFO     | 
[2025-11-30 15:48:12] 2025-11-30 14:47:35,219 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-11-30 15:48:12] 2025-11-30 14:47:35,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | job 6899424665 has completed (purged errors)
[2025-11-30 15:48:12] 2025-11-30 14:47:35,660 | INFO     | overall cleanup function is called
[2025-11-30 15:48:12] 2025-11-30 14:47:36,682 | INFO     | --- collectZombieJob: --- 10, [2261]
[2025-11-30 15:48:12] 2025-11-30 14:47:36,682 | INFO     | zombie collector waiting for pid 2261
[2025-11-30 15:48:12] 2025-11-30 14:47:36,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 15:48:12] 2025-11-30 14:47:36,682 | INFO     | collected zombie processes
[2025-11-30 15:48:12] 2025-11-30 14:47:36,682 | INFO     | will attempt to kill all subprocesses of pid=2261
[2025-11-30 15:48:12] 2025-11-30 14:47:36,791 | INFO     | process IDs to be killed: [2261] (in reverse order)
[2025-11-30 15:48:12] 2025-11-30 14:47:37,621 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 15:48:12] 2025-11-30 14:47:37,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 15:48:12] 2025-11-30 14:47:37,625 | INFO     | did not find any defunct processes belonging to 2261
[2025-11-30 15:48:12] 2025-11-30 14:47:37,627 | INFO     | did not find any defunct processes belonging to 2261
[2025-11-30 15:48:12] 2025-11-30 14:47:37,641 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 15:48:12] 2025-11-30 14:47:37,642 | INFO     | ready for new job
[2025-11-30 15:48:12] 2025-11-30 14:47:37,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 15:48:12] 2025-11-30 14:47:37,647 | INFO     | ***************************************
[2025-11-30 15:48:12] 2025-11-30 14:47:37,647 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 15:48:12] 2025-11-30 14:47:37,647 | INFO     | ***************************************
[2025-11-30 15:48:12] 2025-11-30 14:47:37,647 | INFO     | 
[2025-11-30 15:48:12] 2025-11-30 14:47:37,648 | INFO     | pilot is running in a VM
[2025-11-30 15:48:12] 2025-11-30 14:47:37,648 | INFO     | architecture information:
[2025-11-30 15:48:12] 2025-11-30 14:47:37,651 | INFO     | executing command: cat /etc/os-release
[2025-11-30 15:48:12] 2025-11-30 14:47:37,714 | INFO     | cat /etc/os-release:
[2025-11-30 15:48:12] NAME="CentOS Linux"
[2025-11-30 15:48:12] VERSION="7 (Core)"
[2025-11-30 15:48:12] ID="centos"
[2025-11-30 15:48:12] ID_LIKE="rhel fedora"
[2025-11-30 15:48:12] VERSION_ID="7"
[2025-11-30 15:48:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 15:48:12] ANSI_COLOR="0;31"
[2025-11-30 15:48:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 15:48:12] HOME_URL="https://www.centos.org/"
[2025-11-30 15:48:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 15:48:12] 
[2025-11-30 15:48:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 15:48:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 15:48:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 15:48:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 15:48:12] 
[2025-11-30 15:48:12] 2025-11-30 14:47:37,715 | INFO     | ***************************************
[2025-11-30 15:48:12] 2025-11-30 14:47:38,218 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-11-30 15:48:12] 2025-11-30 14:47:38,420 | INFO     | sufficient remaining disk space (487993638912 B)
[2025-11-30 15:48:12] 2025-11-30 14:47:38,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 15:48:12] 2025-11-30 14:47:38,421 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 15:48:12] 2025-11-30 14:47:38,421 | INFO     | update_server=False
[2025-11-30 15:48:12] 2025-11-30 14:47:38,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 15:48:12] 2025-11-30 14:47:38,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 15:48:12] 2025-11-30 14:47:38,760 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 15:48:12] 2025-11-30 14:47:38,760 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 15:48:12] 2025-11-30 14:47:38,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 15:48:12] 2025-11-30 14:47:38,760 | INFO     | will abort loop
[2025-11-30 15:48:12] 2025-11-30 14:47:39,134 | INFO     | all data control threads have been joined
[2025-11-30 15:48:12] 2025-11-30 14:47:39,427 | INFO     | [job] retrieve thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:39,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:39,578 | INFO     | [payload] failed_post thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:39,766 | INFO     | [job] job monitor thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:39,785 | INFO     | [job] validate thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:39,796 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:39,853 | INFO     | all payload control threads have been joined
[2025-11-30 15:48:12] 2025-11-30 14:47:39,878 | INFO     | all job control threads have been joined
[2025-11-30 15:48:12] 2025-11-30 14:47:39,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 15:48:12] 2025-11-30 14:47:40,140 | INFO     | [data] control thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:40,281 | INFO     | [payload] validate_post thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:40,377 | INFO     | [data] copytool_in thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:40,415 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:40,429 | INFO     | [data] copytool_out thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:40,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 15:48:12] 2025-11-30 14:47:40,859 | INFO     | [payload] control thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:40,884 | INFO     | [job] control thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:40,890 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:40,897 | INFO     | [job] queue monitor thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:44,612 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 15:48:12] 2025-11-30 14:47:49,541 | INFO     | [monitor] cgroup control has ended
[2025-11-30 15:48:12] 2025-11-30 14:47:50,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878540334912)>', '<ExcThread(monitor, started 139877882521344)>']
[2025-11-30 15:48:12] 2025-11-30 14:47:56,001 | INFO     | all workflow threads have been joined
[2025-11-30 15:48:12] 2025-11-30 14:47:56,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 15:48:12] 2025-11-30 14:47:56,001 | INFO     | traces error code: 0
[2025-11-30 15:48:12] 2025-11-30 14:47:56,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 15:48:12] 2025-11-30 14:48:07,730 | INFO     | PID=28066 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-30 15:48:12] 2025-11-30 14:48:07,730 | INFO     | .. there are 9 such processes running
[2025-11-30 15:48:12] 2025-11-30 14:48:07,735 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 15:48:12] 2025-11-30 14:48:07,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 15:48:12] 2025-11-30 14:48:07,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 15:48:12] 2025-11-30 14:48:07,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 15:48:12] 2025-11-30 14:48:07,735 | INFO     | [monitor] control thread has ended
[2025-11-30 15:48:12] 2025-11-30 14:48:08,042 [wrapper] ==== pilot stdout END ====
[2025-11-30 15:48:12] 2025-11-30 14:48:08,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 15:48:12] 2025-11-30 14:48:08,147 [wrapper] pilotpid: 28066
[2025-11-30 15:48:12] 2025-11-30 14:48:08,204 [wrapper] Pilot exit status: 0
[2025-11-30 15:48:12] 2025-11-30 14:48:08,640 [wrapper] pandaids: 6899424665
[2025-11-30 15:48:12] 2025-11-30 14:48:09,498 [wrapper] cleanup supervisor_pilot  8211 28067
[2025-11-30 15:48:12] 2025-11-30 14:48:09,545 [wrapper] Test setup, not cleaning
[2025-11-30 15:48:12] 2025-11-30 14:48:09,645 [wrapper] apfmon messages muted
[2025-11-30 15:48:12] 2025-11-30 14:48:09,737 [wrapper] ==== wrapper stdout END ====
[2025-11-30 15:48:12] 2025-11-30 14:48:09,820 [wrapper] ==== wrapper stderr END ====
[2025-11-30 15:48:12]  *** Error codes and diagnostics ***
[2025-11-30 15:48:12]     "exeErrorCode": 0,
[2025-11-30 15:48:12]     "exeErrorDiag": "",
[2025-11-30 15:48:12]     "pilotErrorCode": 0,
[2025-11-30 15:48:12]     "pilotErrorDiag": "",
[2025-11-30 15:48:12]  *** Listing of results directory ***
[2025-11-30 15:48:12] total 1318456
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc    576529 Nov 27 02:09 pilot3.tar.gz
[2025-11-30 15:48:12] -rwx------. 1 boinc boinc     36292 Nov 27 02:26 runpilot2-wrapper.sh
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc      5112 Nov 27 02:27 queuedata.json
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc       100 Nov 29 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 15:48:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 16:06 run_atlas
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc       105 Nov 29 16:06 job.xml
[2025-11-30 15:48:12] -rw-r--r--. 2 boinc boinc 408254534 Nov 29 16:06 EVNT.47483658._003291.pool.root.1
[2025-11-30 15:48:12] -rw-r--r--. 2 boinc boinc     15847 Nov 29 16:06 start_atlas.sh
[2025-11-30 15:48:12] drwxrwx--x. 2 boinc boinc        68 Nov 29 16:06 shared
[2025-11-30 15:48:12] -rw-r--r--. 2 boinc boinc    590111 Nov 29 16:06 input.tar.gz
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc      6394 Nov 29 16:06 init_data.xml
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc         0 Nov 29 16:06 boinc_lockfile
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc      2787 Nov 29 16:06 pandaJob.out
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc    991826 Nov 29 16:10 agis_schedconf.cvmfs.json
[2025-11-30 15:48:12] drwx------. 5 boinc boinc      4096 Nov 29 16:10 pilot3
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc       533 Nov 30 15:19 boinc_task_state.xml
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc 910348483 Nov 30 15:44 HITS.47556173._002474.pool.root.1
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc      1029 Nov 30 15:45 memory_monitor_summary.json
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc   1516240 Nov 30 15:45 agis_ddmendpoints.agis.ALL.json
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc   2463104 Nov 30 15:45 log.47556173._002474.job.log.tgz.1
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc      7949 Nov 30 15:47 heartbeat.json
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc      8192 Nov 30 15:48 boinc_mmap_file
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc        29 Nov 30 15:48 wrapper_checkpoint.txt
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc        95 Nov 30 15:48 pilot_heartbeat.json
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc       820 Nov 30 15:48 pilotlog.txt
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc  11336037 Nov 30 15:48 log.47556173._002474.job.log.1
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc       353 Nov 30 15:48 output.list
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc       620 Nov 30 15:48 runtime_log
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc  13813760 Nov 30 15:48 result.tar.gz
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc      8833 Nov 30 15:48 runtime_log.err
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc       662 Nov 30 15:48 mmIODmkxfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSYNKDmEG089m.diag
[2025-11-30 15:48:12] -rw-r--r--. 1 boinc boinc     21400 Nov 30 15:48 stderr.txt
[2025-11-30 15:48:12] HITS file was successfully produced:
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc 910348483 Nov 30 15:44 shared/HITS.pool.root.1
[2025-11-30 15:48:12]  *** Contents of shared directory: ***
[2025-11-30 15:48:12] total 1301792
[2025-11-30 15:48:12] -rw-r--r--. 2 boinc boinc 408254534 Nov 29 16:06 ATLAS.root_0
[2025-11-30 15:48:12] -rw-r--r--. 2 boinc boinc     15847 Nov 29 16:06 start_atlas.sh
[2025-11-30 15:48:12] -rw-r--r--. 2 boinc boinc    590111 Nov 29 16:06 input.tar.gz
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc 910348483 Nov 30 15:44 HITS.pool.root.1
[2025-11-30 15:48:12] -rw-------. 1 boinc boinc  13813760 Nov 30 15:48 result.tar.gz
15:48:13 (24251): run_atlas exited; CPU time 318467.104493
15:48:13 (24251): called boinc_finish(0)

</stderr_txt>
]]>

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