Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 17:35:11 (32008): vboxwrapper version 26210
2025-11-27 17:35:11 (32008): BOINC client version: 8.2.4
2025-11-27 17:35:12 (32008): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-11-27 17:35:12 (32008): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 17:35:12 (32008): Create VM. (boinc_e46704a427e13b2a, slot#4)
2025-11-27 17:35:14 (32008): Setting Memory Size for VM. (4800MB)
2025-11-27 17:35:14 (32008): Setting CPU Count for VM. (8)
2025-11-27 17:35:15 (32008): Setting Chipset Options for VM.
2025-11-27 17:35:15 (32008): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 17:35:16 (32008): Setting Boot Options for VM.
2025-11-27 17:35:17 (32008): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 17:35:17 (32008): Enabling VM Network Access.
2025-11-27 17:35:18 (32008): Disabling USB Support for VM.
2025-11-27 17:35:18 (32008): Disabling COM Port Support for VM.
2025-11-27 17:35:18 (32008): Disabling LPT Port Support for VM.
2025-11-27 17:35:19 (32008): Disabling Audio Support for VM.
2025-11-27 17:35:19 (32008): Disabling Clipboard Support for VM.
2025-11-27 17:35:19 (32008): Disabling Drag and Drop Support for VM.
2025-11-27 17:35:20 (32008): Adding storage controller(s) to VM.
2025-11-27 17:35:20 (32008): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 17:35:22 (32008): Adding VirtualBox Guest Additions to VM.
2025-11-27 17:35:22 (32008): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 17:35:22 (32008): forwarding host port 58004 to guest port 80
2025-11-27 17:35:23 (32008): Enabling remote desktop for VM.
2025-11-27 17:35:23 (32008): Required extension pack not installed, remote desktop not enabled.
2025-11-27 17:35:23 (32008): Enabling shared directory for VM.
2025-11-27 17:35:23 (32008): Starting VM using VBoxManage interface. (boinc_e46704a427e13b2a, slot#4)
2025-11-27 17:35:30 (32008): Successfully started VM. (PID = '14936')
2025-11-27 17:35:30 (32008): Reporting VM Process ID to BOINC.
2025-11-27 17:35:30 (32008): Guest Log: BIOS: VirtualBox 7.1.4
2025-11-27 17:35:30 (32008): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 17:35:30 (32008): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 17:35:30 (32008): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 17:35:30 (32008): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 17:35:30 (32008): Detected: Web Application Enabled (http://localhost:58004)
2025-11-27 17:35:30 (32008): Preference change detected
2025-11-27 17:35:30 (32008): Setting CPU throttle for VM. (100%)
2025-11-27 17:35:30 (32008): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 17:35:32 (32008): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 17:35:32 (32008): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 17:35:35 (32008): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 17:35:35 (32008): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 17:35:35 (32008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 17:35:44 (32008): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 17:35:44 (32008): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 17:36:00 (32008): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 17:36:00 (32008): Guest Log: 00:00:00.000178 main     Log opened 2025-11-27T17:35:58.572746000Z
2025-11-27 17:36:00 (32008): Guest Log: 00:00:00.000299 main     OS Product: Linux
2025-11-27 17:36:00 (32008): Guest Log: 00:00:00.000350 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 17:36:00 (32008): Guest Log: 00:00:00.000384 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 17:36:00 (32008): Guest Log: 00:00:00.000408 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 17:36:00 (32008): Guest Log: 00:00:00.000408 main     Process ID: 1381
2025-11-27 17:36:00 (32008): Guest Log: 00:00:00.000409 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 17:36:00 (32008): Guest Log: 00:00:00.001022 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 17:36:00 (32008): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 17:36:00 (32008): Guest Log: [INFO] Mounting shared directory
2025-11-27 17:36:00 (32008): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 17:36:05 (32008): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 17:36:05 (32008): Guest Log: [INFO] Detected branch: prod
2025-11-27 17:36:05 (32008): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 17:36:05 (32008): Guest Log: Copying input files
2025-11-27 17:36:07 (32008): Guest Log: Copied input files into RunAtlas.
2025-11-27 17:36:07 (32008): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 17:36:07 (32008): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 17:36:07 (32008): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 17:36:07 (32008): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 17:36:10 (32008): Guest Log: 00:00:10.014212 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 434 976 000ns (GuestNow=1 764 261 369 140 883 000 ns GuestLast=1 764 264 958 575 859 000 ns fSetTimeLastLoop=true )
2025-11-27 17:36:23 (32008): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 17:36:23 (32008): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 17:36:23 (32008): Guest Log: 2.6.3.0 1674 0 30136 153373 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 17:36:26 (32008): Guest Log: copied the webapp to /var/www
2025-11-27 17:36:26 (32008): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-27 17:36:26 (32008): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-27 17:36:26 (32008): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 17:36:26 (32008): Guest Log:  *** Starting ATLAS job. (PandaID=6899115449 taskID=47556173) ***
2025-11-27 19:16:43 (32008): Status Report: Elapsed Time: '6000.000000'
2025-11-27 19:16:43 (32008): Status Report: CPU Time: '42971.718750'
2025-11-27 20:57:22 (32008): Status Report: Elapsed Time: '12000.000000'
2025-11-27 20:57:22 (32008): Status Report: CPU Time: '86895.296875'
2025-11-27 22:38:00 (32008): Status Report: Elapsed Time: '18000.000000'
2025-11-27 22:38:00 (32008): Status Report: CPU Time: '130791.843750'
2025-11-28 00:18:38 (32008): Status Report: Elapsed Time: '24000.000000'
2025-11-28 00:18:38 (32008): Status Report: CPU Time: '174727.265625'
2025-11-28 01:59:17 (32008): Status Report: Elapsed Time: '30000.000000'
2025-11-28 01:59:17 (32008): Status Report: CPU Time: '218726.656250'
2025-11-28 03:30:07 (32008): Guest Log:  *** Job finished ***
2025-11-28 03:30:07 (32008): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:39,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:39,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:46,862 | INFO     | [monitor] cgroup control has ended
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:47,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455681296192)>', '<ExcThread(monitor, started 140455010359040)>']
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:47,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:47,547 | INFO     | [monitor] control thread has ended
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,071 | INFO     | all workflow threads have been joined
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,071 | INFO     | end of generic workflow (traces error code: 0)
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,071 | INFO     | traces error code: 0
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,412 [wrapper] ==== pilot stdout END ====
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,417 [wrapper] ==== wrapper stdout RESUME ====
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,428 [wrapper] pilotpid: 6093
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,433 [wrapper] Pilot exit status: 0
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,479 [wrapper] pandaids: 6899115449
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,512 [wrapper] cleanup supervisor_pilot 16995 6094
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,517 [wrapper] Test setup, not cleaning
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,521 [wrapper] apfmon messages muted
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,526 [wrapper] ==== wrapper stdout END ====
2025-11-28 03:30:07 (32008): Guest Log: 2025-11-28 02:29:52,531 [wrapper] ==== wrapper stderr END ====
2025-11-28 03:30:07 (32008): Guest Log:  *** Error codes and diagnostics ***
2025-11-28 03:30:07 (32008): Guest Log:     "exeErrorCode": 0,
2025-11-28 03:30:07 (32008): Guest Log:     "exeErrorDiag": "",
2025-11-28 03:30:07 (32008): Guest Log:     "pilotErrorCode": 0,
2025-11-28 03:30:07 (32008): Guest Log:     "pilotErrorDiag": "",
2025-11-28 03:30:07 (32008): Guest Log:  *** Listing of results directory ***
2025-11-28 03:30:07 (32008): Guest Log: total 911184
2025-11-28 03:30:07 (32008): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 27 01:09 pilot3.tar.gz
2025-11-28 03:30:07 (32008): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 27 01:26 runpilot2-wrapper.sh
2025-11-28 03:30:07 (32008): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 27 01:27 queuedata.json
2025-11-28 03:30:07 (32008): Guest Log: -rwxr-xr-x. 1 atlas atlas      8758 Nov 27 16:36 init_data.xml
2025-11-28 03:30:07 (32008): Guest Log: -rwxr-xr-x. 1 atlas atlas    590109 Nov 27 16:36 input.tar.gz
2025-11-28 03:30:07 (32008): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 27 16:36 start_atlas.sh
2025-11-28 03:30:07 (32008): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 16:36 EVNT.47483658._003268.pool.root.1 -> /data/./ATLAS.root_0
2025-11-28 03:30:07 (32008): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 27 16:36 pandaJob.out
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas    991572 Nov 27 16:36 agis_schedconf.cvmfs.json
2025-11-28 03:30:07 (32008): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 16:37 pilot3
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas 916171136 Nov 28 02:28 HITS.47556173._002241.pool.root.1
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 28 02:28 memory_monitor_summary.json
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 28 02:28 agis_ddmendpoints.agis.ALL.json
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas   1843833 Nov 28 02:28 log.47556173._002241.job.log.tgz.1
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas      8599 Nov 28 02:29 heartbeat.json
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas        95 Nov 28 02:29 pilot_heartbeat.json
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 28 02:29 pilotlog.txt
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas   4672961 Nov 28 02:29 log.47556173._002241.job.log.1
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas       353 Nov 28 02:29 output.list
2025-11-28 03:30:07 (32008): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 28 02:29 runtime_log
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas   6533120 Nov 28 02:29 result.tar.gz
2025-11-28 03:30:07 (32008): Guest Log: -rw-------. 1 atlas atlas       657 Nov 28 02:29 u7wLDmYxfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfXNKDmjvDPin.diag
2025-11-28 03:30:07 (32008): Guest Log: -rw-r--r--. 1 atlas atlas      8725 Nov 28 02:29 runtime_log.err
2025-11-28 03:30:07 (32008): Guest Log: Looking for outputfile HITS.47556173._002241.pool.root.1
2025-11-28 03:30:08 (32008): Guest Log: HITS file was successfully produced
2025-11-28 03:30:08 (32008): Guest Log: -rw-------. 1 atlas atlas 916171136 Nov 28 02:28 /home/atlas/RunAtlas/HITS.47556173._002241.pool.root.1
2025-11-28 03:30:13 (32008): Guest Log: Successfully finished the ATLAS job!
2025-11-28 03:30:13 (32008): Guest Log: Copying the results back to the shared directory!
2025-11-28 03:30:13 (32008): Guest Log:  *** Contents of shared directory: ***
2025-11-28 03:30:13 (32008): Guest Log: total 1302576
2025-11-28 03:30:13 (32008): Guest Log: -rwxrwxrwx. 1 root root 410506799 Nov 27 16:35 ATLAS.root_0
2025-11-28 03:30:13 (32008): Guest Log: -rwxrwxrwx. 1 root root 916171136 Nov 28  2025 HITS.pool.root.1
2025-11-28 03:30:13 (32008): Guest Log: -rwxrwxrwx. 1 root root      8758 Nov 27 16:35 init_data.xml
2025-11-28 03:30:13 (32008): Guest Log: -rwxrwxrwx. 1 root root    590109 Nov 27 16:34 input.tar.gz
2025-11-28 03:30:13 (32008): Guest Log: -rwxrwxrwx. 1 root root   6533120 Nov 28  2025 result.tar.gz
2025-11-28 03:30:13 (32008): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 27 16:34 start_atlas.sh
2025-11-28 03:30:13 (32008): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-28 03:30:13 (32008): VM Completion File Detected.
2025-11-28 03:30:13 (32008): Powering off VM.
2025-11-28 03:30:15 (32008): Successfully stopped VM.
2025-11-28 03:30:15 (32008): Deregistering VM. (boinc_e46704a427e13b2a, slot#4)
2025-11-28 03:30:15 (32008): Removing network bandwidth throttle group from VM.
2025-11-28 03:30:15 (32008): Removing VM from VirtualBox.
2025-11-28 03:30:21 (32008): called boinc_finish(0)

</stderr_txt>
]]>

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