Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:11:17 (19248): wrapper (7.7.26015): starting
11:11:17 (19248): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 11:11:17] Arguments: --nthreads 12
[2025-11-27 11:11:17] Threads: 12
[2025-11-27 11:11:17] Checking for CVMFS
[2025-11-27 11:11:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:11:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:11:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:11:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:11:17] 2.11.2.0 30551 119286 92992 153372 3 81 10471977 20275201 1 130560 0 52966144 99.918 6462151 29097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 11:11:17] CVMFS is ok
[2025-11-27 11:11:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:11:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:11:17] Further information can be found at the LHC@home message board.
[2025-11-27 11:11:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:11:17] Checking for apptainer binary...
[2025-11-27 11:11:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:11:17] Running /usr/bin/apptainer --version
[2025-11-27 11:11:17] apptainer version 1.3.2-1.el7
[2025-11-27 11:11:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:11:19] c-205-16.aglt2.org
[2025-11-27 11:11:19] apptainer works
[2025-11-27 11:11:19] Set ATHENA_PROC_NUMBER=12
[2025-11-27 11:11:19] Set ATHENA_CORE_NUMBER=12
[2025-11-27 11:11:19] Starting ATLAS job with PandaID=6899424451
[2025-11-27 11:11:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:27:30]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:27:30] 2025-11-27 23:26:55,399 | INFO     | time since job start (26121s) is within the limit (172800.0s)
[2025-11-27 18:27:30] 2025-11-27 23:26:57,405 | INFO     | time since job start (26123s) is within the limit (172800.0s)
[2025-11-27 18:27:30] 2025-11-27 23:26:57,824 | INFO     | monitor loop #1959: job 0:6899424451 is in state 'finished'
[2025-11-27 18:27:30] 2025-11-27 23:26:57,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,061 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 18:27:30] 2025-11-27 23:26:59,065 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-11-27 18:27:30] 2025-11-27 23:26:59,068 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6899424451/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,069 | INFO     | extracted standard info from prmon json
[2025-11-27 18:27:30] 2025-11-27 23:26:59,069 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:27:30] 2025-11-27 23:26:59,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:27:30] 2025-11-27 23:26:59,076 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:27:30] 2025-11-27 23:26:59,077 | INFO     | sum of square deviations: 24311222196.07456
[2025-11-27 18:27:30] 2025-11-27 23:26:59,081 | INFO     | sum of deviations: 401963228584.7857
[2025-11-27 18:27:30] 2025-11-27 23:26:59,081 | INFO     | mean x: 1764272947.7102804
[2025-11-27 18:27:30] 2025-11-27 23:26:59,081 | INFO     | mean y: 3421275.707943925
[2025-11-27 18:27:30] 2025-11-27 23:26:59,081 | INFO     | intersect: -29167175103.478973
[2025-11-27 18:27:30] 2025-11-27 23:26:59,082 | INFO     | chi2: 6.068014194793324
[2025-11-27 18:27:30] 2025-11-27 23:26:59,082 | INFO     | sum of square deviations: 23469131530.851036
[2025-11-27 18:27:30] 2025-11-27 23:26:59,086 | INFO     | sum of deviations: 574270936950.5106
[2025-11-27 18:27:30] 2025-11-27 23:26:59,086 | INFO     | mean x: 1764272795.212766
[2025-11-27 18:27:30] 2025-11-27 23:26:59,086 | INFO     | mean y: 3452469.016548463
[2025-11-27 18:27:30] 2025-11-27 23:26:59,087 | INFO     | intersect: -43166896199.88419
[2025-11-27 18:27:30] 2025-11-27 23:26:59,087 | INFO     | chi2: 2.7407007553561624
[2025-11-27 18:27:30] 2025-11-27 23:26:59,087 | INFO     | current chi2=2.7407007553561624 (change=54.83364627413317 %)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,088 | INFO     | sum of square deviations: 22646715653.121773
[2025-11-27 18:27:30] 2025-11-27 23:26:59,091 | INFO     | sum of deviations: 608077923766.0596
[2025-11-27 18:27:30] 2025-11-27 23:26:59,092 | INFO     | mean x: 1764272642.715311
[2025-11-27 18:27:30] 2025-11-27 23:26:59,092 | INFO     | mean y: 3458686.1937799044
[2025-11-27 18:27:30] 2025-11-27 23:26:59,092 | INFO     | intersect: -47368321927.46449
[2025-11-27 18:27:30] 2025-11-27 23:26:59,092 | INFO     | chi2: 2.338386957796734
[2025-11-27 18:27:30] 2025-11-27 23:26:59,092 | INFO     | current chi2=2.338386957796734 (change=14.679231097126719 %)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,093 | INFO     | right removable region: 417
[2025-11-27 18:27:30] 2025-11-27 23:26:59,093 | INFO     | sum of square deviations: 23469076630.851025
[2025-11-27 18:27:30] 2025-11-27 23:26:59,097 | INFO     | sum of deviations: 269160613235.72333
[2025-11-27 18:27:30] 2025-11-27 23:26:59,097 | INFO     | mean x: 1764273100.212766
[2025-11-27 18:27:30] 2025-11-27 23:26:59,097 | INFO     | mean y: 3445244.236406619
[2025-11-27 18:27:30] 2025-11-27 23:26:59,097 | INFO     | intersect: -20230534858.087677
[2025-11-27 18:27:30] 2025-11-27 23:26:59,098 | INFO     | chi2: 3.9370334662729745
[2025-11-27 18:27:30] 2025-11-27 23:26:59,098 | INFO     | current chi2=3.9370334662729745 (change=35.11825549697698 %)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,098 | INFO     | sum of square deviations: 22646631411.550377
[2025-11-27 18:27:30] 2025-11-27 23:26:59,102 | INFO     | sum of deviations: 230004559992.67444
[2025-11-27 18:27:30] 2025-11-27 23:26:59,102 | INFO     | mean x: 1764273252.7129188
[2025-11-27 18:27:30] 2025-11-27 23:26:59,102 | INFO     | mean y: 3452497.9306220096
[2025-11-27 18:27:30] 2025-11-27 23:26:59,102 | INFO     | intersect: -17914925110.76377
[2025-11-27 18:27:30] 2025-11-27 23:26:59,103 | INFO     | chi2: 3.8557087003960646
[2025-11-27 18:27:30] 2025-11-27 23:26:59,103 | INFO     | current chi2=3.8557087003960646 (change=2.0656356257468294 %)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,103 | INFO     | left removable region: 20
[2025-11-27 18:27:30] 2025-11-27 23:26:59,104 | INFO     | sum of square deviations: 19401999959.370228
[2025-11-27 18:27:30] 2025-11-27 23:26:59,107 | INFO     | sum of deviations: 379532099204.53674
[2025-11-27 18:27:30] 2025-11-27 23:26:59,107 | INFO     | mean x: 1764273222.2166247
[2025-11-27 18:27:30] 2025-11-27 23:26:59,107 | INFO     | mean y: 3502042.1914357683
[2025-11-27 18:27:30] 2025-11-27 23:26:59,107 | INFO     | intersect: -34508317409.433914
[2025-11-27 18:27:30] 2025-11-27 23:26:59,108 | INFO     | chi2: 0.05064625343919539
[2025-11-27 18:27:30] 2025-11-27 23:26:59,108 | INFO     | current memory leak: 19.56 B/s (using 397 data points, chi2=0.05)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,108 | INFO     | could have reported an average CPU frequency of 2415 MHz (18 samples)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | ..............................
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | . Timing measurements:
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | . get job = 0 s
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | . initial setup = 2 s
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | . payload setup = 7 s
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | . stage-in = 0 s
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | . payload execution = 26085 s
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | . stage-out = 3 s
[2025-11-27 18:27:30] 2025-11-27 23:26:59,109 | INFO     | . log creation = 0 s
[2025-11-27 18:27:30] 2025-11-27 23:26:59,110 | INFO     | ..............................
[2025-11-27 18:27:30] 2025-11-27 23:26:59,190 | INFO     | 
[2025-11-27 18:27:30] 2025-11-27 23:26:59,191 | INFO     | job summary report
[2025-11-27 18:27:30] 2025-11-27 23:26:59,191 | INFO     | --------------------------------------------------
[2025-11-27 18:27:30] 2025-11-27 23:26:59,191 | INFO     | PanDA job id: 6899424451
[2025-11-27 18:27:30] 2025-11-27 23:26:59,191 | INFO     | task id: 47556185
[2025-11-27 18:27:30] 2025-11-27 23:26:59,191 | INFO     | errors: (none)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,191 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | pilot state: finished 
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | transexitcode: 0
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | exeerrorcode: 0
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | exeerrordiag: 
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | exitcode: 0
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | exitmsg: OK
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | cpuconsumptiontime: 298954 s
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | nevents: 1000
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | neventsw: 0
[2025-11-27 18:27:30] 2025-11-27 23:26:59,192 | INFO     | pid: 29418
[2025-11-27 18:27:30] 2025-11-27 23:26:59,193 | INFO     | pgrp: 29418
[2025-11-27 18:27:30] 2025-11-27 23:26:59,193 | INFO     | corecount: 12
[2025-11-27 18:27:30] 2025-11-27 23:26:59,193 | INFO     | event service: False
[2025-11-27 18:27:30] 2025-11-27 23:26:59,193 | INFO     | sizes: {0: 2284314, 5: 2284576, 11: 2284632, 26097: 2321980, 26100: 2330974, 26101: 2331030, 26108: 2331404}
[2025-11-27 18:27:30] 2025-11-27 23:26:59,193 | INFO     | --------------------------------------------------
[2025-11-27 18:27:30] 2025-11-27 23:26:59,193 | INFO     | 
[2025-11-27 18:27:30] 2025-11-27 23:26:59,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 18:27:30] 2025-11-27 23:26:59,216 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,216 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,216 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,217 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:27:30] 2025-11-27 23:26:59,220 | INFO     | job 6899424451 has completed (purged errors)
[2025-11-27 18:27:30] 2025-11-27 23:26:59,220 | INFO     | overall cleanup function is called
[2025-11-27 18:27:30] 2025-11-27 23:27:00,235 | INFO     | --- collectZombieJob: --- 10, [29418]
[2025-11-27 18:27:30] 2025-11-27 23:27:00,236 | INFO     | zombie collector waiting for pid 29418
[2025-11-27 18:27:30] 2025-11-27 23:27:00,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:27:30] 2025-11-27 23:27:00,236 | INFO     | collected zombie processes
[2025-11-27 18:27:30] 2025-11-27 23:27:00,236 | INFO     | will attempt to kill all subprocesses of pid=29418
[2025-11-27 18:27:30] 2025-11-27 23:27:00,326 | INFO     | process IDs to be killed: [29418] (in reverse order)
[2025-11-27 18:27:30] 2025-11-27 23:27:00,377 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:27:30] 2025-11-27 23:27:00,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:27:30] 2025-11-27 23:27:00,381 | INFO     | did not find any defunct processes belonging to 29418
[2025-11-27 18:27:30] 2025-11-27 23:27:00,384 | INFO     | did not find any defunct processes belonging to 29418
[2025-11-27 18:27:30] 2025-11-27 23:27:00,386 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:27:30] 2025-11-27 23:27:00,386 | INFO     | ready for new job
[2025-11-27 18:27:30] 2025-11-27 23:27:00,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:27:30] 2025-11-27 23:27:00,388 | INFO     | ***************************************
[2025-11-27 18:27:30] 2025-11-27 23:27:00,388 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:27:30] 2025-11-27 23:27:00,388 | INFO     | ***************************************
[2025-11-27 18:27:30] 2025-11-27 23:27:00,388 | INFO     | 
[2025-11-27 18:27:30] 2025-11-27 23:27:00,389 | INFO     | architecture information:
[2025-11-27 18:27:30] 2025-11-27 23:27:00,390 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:27:30] 2025-11-27 23:27:00,405 | INFO     | cat /etc/os-release:
[2025-11-27 18:27:30] NAME="CentOS Linux"
[2025-11-27 18:27:30] VERSION="7 (Core)"
[2025-11-27 18:27:30] ID="centos"
[2025-11-27 18:27:30] ID_LIKE="rhel fedora"
[2025-11-27 18:27:30] VERSION_ID="7"
[2025-11-27 18:27:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:27:30] ANSI_COLOR="0;31"
[2025-11-27 18:27:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:27:30] HOME_URL="https://www.centos.org/"
[2025-11-27 18:27:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:27:30] 
[2025-11-27 18:27:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:27:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:27:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:27:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:27:30] 
[2025-11-27 18:27:30] 2025-11-27 23:27:00,406 | INFO     | ***************************************
[2025-11-27 18:27:30] 2025-11-27 23:27:00,909 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 18:27:30] 2025-11-27 23:27:00,926 | INFO     | sufficient remaining disk space (28372369408 B)
[2025-11-27 18:27:30] 2025-11-27 23:27:00,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:27:30] 2025-11-27 23:27:00,926 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:27:30] 2025-11-27 23:27:00,926 | INFO     | update_server=False
[2025-11-27 18:27:30] 2025-11-27 23:27:00,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:27:30] 2025-11-27 23:27:00,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:27:30] 2025-11-27 23:27:01,217 | INFO     | all data control threads have been joined
[2025-11-27 18:27:30] 2025-11-27 23:27:01,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:27:30] 2025-11-27 23:27:01,335 | INFO     | aborting loop
[2025-11-27 18:27:30] 2025-11-27 23:27:01,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:27:30] 2025-11-27 23:27:01,932 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:01,933 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:01,942 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:01,946 | INFO     | [job] validate thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:02,175 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:02,223 | INFO     | [data] control thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:02,284 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:02,301 | INFO     | all payload control threads have been joined
[2025-11-27 18:27:30] 2025-11-27 23:27:02,340 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:02,550 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:02,609 | INFO     | all job control threads have been joined
[2025-11-27 18:27:30] 2025-11-27 23:27:02,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:27:30] 2025-11-27 23:27:03,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:03,187 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:03,274 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:03,302 | INFO     | [payload] control thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:03,614 | INFO     | [job] control thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:03,733 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:06,686 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:27:30] 2025-11-27 23:27:16,748 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:27:30] 2025-11-27 23:27:18,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662823868224)>', '<ExcThread(monitor, started 140662116706048)>']
[2025-11-27 18:27:30] 2025-11-27 23:27:23,576 | INFO     | all workflow threads have been joined
[2025-11-27 18:27:30] 2025-11-27 23:27:23,577 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:27:30] 2025-11-27 23:27:23,577 | INFO     | traces error code: 0
[2025-11-27 18:27:30] 2025-11-27 23:27:23,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:27:30] 2025-11-27 23:27:30,608 | INFO     | PID=23023 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 18:27:30] 2025-11-27 23:27:30,608 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:27:30] 2025-11-27 23:27:30,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:27:30] 2025-11-27 23:27:30,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:27:30] 2025-11-27 23:27:30,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:27:30] 2025-11-27 23:27:30,609 | INFO     | [monitor] control thread has ended
[2025-11-27 18:27:30] 2025-11-27 23:27:30,697 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:27:30] 2025-11-27 23:27:30,701 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:27:30] 2025-11-27 23:27:30,705 [wrapper] pilotpid: 23023
[2025-11-27 18:27:30] 2025-11-27 23:27:30,709 [wrapper] Pilot exit status: 0
[2025-11-27 18:27:30] 2025-11-27 23:27:30,725 [wrapper] pandaids: 6899424451
[2025-11-27 18:27:30] 2025-11-27 23:27:30,763 [wrapper] cleanup supervisor_pilot  9031 23024
[2025-11-27 18:27:30] 2025-11-27 23:27:30,767 [wrapper] Test setup, not cleaning
[2025-11-27 18:27:30] 2025-11-27 23:27:30,771 [wrapper] apfmon messages muted
[2025-11-27 18:27:30] 2025-11-27 23:27:30,775 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:27:30] 2025-11-27 23:27:30,779 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:27:30]  *** Error codes and diagnostics ***
[2025-11-27 18:27:30]     "exeErrorCode": 0,
[2025-11-27 18:27:30]     "exeErrorDiag": "",
[2025-11-27 18:27:30]     "pilotErrorCode": 0,
[2025-11-27 18:27:30]     "pilotErrorDiag": "",
[2025-11-27 18:27:30]  *** Listing of results directory ***
[2025-11-27 18:27:30] total 1324844
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-27 18:27:30] -rwx------ 1 boincer umatlas     36292 Nov 26 20:26 runpilot2-wrapper.sh
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 20:27 queuedata.json
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas       100 Nov 27 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:27:30] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 11:11 run_atlas
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas       105 Nov 27 11:11 job.xml
[2025-11-27 18:27:30] -rw-r--r-- 2 boincer umatlas 411606285 Nov 27 11:11 EVNT.47483658._004314.pool.root.1
[2025-11-27 18:27:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 11:11 start_atlas.sh
[2025-11-27 18:27:30] drwxrwx--x 2 boincer umatlas      4096 Nov 27 11:11 shared
[2025-11-27 18:27:30] -rw-r--r-- 2 boincer umatlas    590109 Nov 27 11:11 input.tar.gz
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas         0 Nov 27 11:11 boinc_lockfile
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas      2786 Nov 27 11:11 pandaJob.out
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas        57 Nov 27 11:11 setup.sh.local
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas    991572 Nov 27 11:11 agis_schedconf.cvmfs.json
[2025-11-27 18:27:30] drwx------ 5 boincer umatlas      4096 Nov 27 11:11 pilot3
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas       532 Nov 27 18:18 boinc_task_state.xml
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 18:20 init_data.xml
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas 929444247 Nov 27 18:26 HITS.47556185._000772.pool.root.1
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas      1061 Nov 27 18:26 memory_monitor_summary.json
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas        95 Nov 27 18:26 pilot_heartbeat.json
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas   1516240 Nov 27 18:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas   2169101 Nov 27 18:26 log.47556185._000772.job.log.tgz.1
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas      8662 Nov 27 18:26 heartbeat.json
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 18:27 boinc_mmap_file
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas        29 Nov 27 18:27 wrapper_checkpoint.txt
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas       745 Nov 27 18:27 pilotlog.txt
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas   3665436 Nov 27 18:27 log.47556185._000772.job.log.1
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas       353 Nov 27 18:27 output.list
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas       620 Nov 27 18:27 runtime_log
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas   5857280 Nov 27 18:27 result.tar.gz
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 18:27 runtime_log.err
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas       670 Nov 27 18:27 GIxNDmoxfi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtPKKDmfKRv9n.diag
[2025-11-27 18:27:30] -rw-r--r-- 1 boincer umatlas     21316 Nov 27 18:27 stderr.txt
[2025-11-27 18:27:30] HITS file was successfully produced:
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas 929444247 Nov 27 18:26 shared/HITS.pool.root.1
[2025-11-27 18:27:30]  *** Contents of shared directory: ***
[2025-11-27 18:27:30] total 1315948
[2025-11-27 18:27:30] -rw-r--r-- 2 boincer umatlas 411606285 Nov 27 11:11 ATLAS.root_0
[2025-11-27 18:27:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 11:11 start_atlas.sh
[2025-11-27 18:27:30] -rw-r--r-- 2 boincer umatlas    590109 Nov 27 11:11 input.tar.gz
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas 929444247 Nov 27 18:26 HITS.pool.root.1
[2025-11-27 18:27:30] -rw------- 1 boincer umatlas   5857280 Nov 27 18:27 result.tar.gz
18:27:32 (19248): run_atlas exited; CPU time 291893.906092
18:27:32 (19248): called boinc_finish(0)

</stderr_txt>
]]>

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