Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:02:33 (3428740): wrapper (7.7.26015): starting
11:02:33 (3428740): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 11:02:33] Arguments: --nthreads 8
[2025-11-27 11:02:33] Threads: 8
[2025-11-27 11:02:33] Checking for CVMFS
[2025-11-27 11:02:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:02:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:02:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:02:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:02:34] 2.13.3.0 11338 31570 332900 153372 1 457 17482904 32935936 42279 16776704 0 168362258 99.542 196141474 38244 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 11:02:34] CVMFS is ok
[2025-11-27 11:02:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:02:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:02:34] Further information can be found at the LHC@home message board.
[2025-11-27 11:02:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:02:34] Checking for apptainer binary...
[2025-11-27 11:02:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:02:34] Running /usr/bin/apptainer --version
[2025-11-27 11:02:34] apptainer version 1.4.4-1.el9
[2025-11-27 11:02:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:02:35] c7-3-17.aglt2.org
[2025-11-27 11:02:35] apptainer works
[2025-11-27 11:02:35] Set ATHENA_PROC_NUMBER=8
[2025-11-27 11:02:35] Set ATHENA_CORE_NUMBER=8
[2025-11-27 11:02:35] Starting ATLAS job with PandaID=6898378210
[2025-11-27 11:02:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:43:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:43:34] 2025-11-28 04:42:44,986 | INFO     | monitor loop #2454: job 0:6898378210 is in state 'finished'
[2025-11-27 23:43:34] 2025-11-28 04:42:44,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:43:34] 2025-11-28 04:42:46,861 | INFO     | time since job start (45582s) is within the limit (172800.0s)
[2025-11-27 23:43:34] 2025-11-28 04:42:47,512 | INFO     | monitor loop #2455: job 0:6898378210 is in state 'finished'
[2025-11-27 23:43:34] 2025-11-28 04:42:47,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:43:34] 2025-11-28 04:42:48,869 | INFO     | time since job start (45584s) is within the limit (172800.0s)
[2025-11-27 23:43:34] 2025-11-28 04:42:50,017 | INFO     | monitor loop #2456: job 0:6898378210 is in state 'finished'
[2025-11-27 23:43:34] 2025-11-28 04:42:50,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:43:34] 2025-11-28 04:42:50,890 | INFO     | time since job start (45586s) is within the limit (172800.0s)
[2025-11-27 23:43:34] 2025-11-28 04:42:52,523 | INFO     | monitor loop #2457: job 0:6898378210 is in state 'finished'
[2025-11-27 23:43:34] 2025-11-28 04:42:52,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:43:34] 2025-11-28 04:42:52,897 | INFO     | time since job start (45588s) is within the limit (172800.0s)
[2025-11-27 23:43:34] 2025-11-28 04:42:54,904 | INFO     | time since job start (45590s) is within the limit (172800.0s)
[2025-11-27 23:43:34] 2025-11-28 04:42:55,027 | INFO     | monitor loop #2458: job 0:6898378210 is in state 'finished'
[2025-11-27 23:43:34] 2025-11-28 04:42:55,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,427 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:43:34] 2025-11-28 04:42:56,439 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3155.947385416666
[2025-11-27 23:43:34] 2025-11-28 04:42:56,459 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6898378210/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,460 | INFO     | extracted standard info from prmon json
[2025-11-27 23:43:34] 2025-11-28 04:42:56,460 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:43:34] 2025-11-28 04:42:56,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:43:34] 2025-11-28 04:42:56,475 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:43:34] 2025-11-28 04:42:56,476 | INFO     | sum of square deviations: 129263337783.65762
[2025-11-27 23:43:34] 2025-11-28 04:42:56,486 | INFO     | sum of deviations: 394455216256.9199
[2025-11-27 23:43:34] 2025-11-28 04:42:56,486 | INFO     | mean x: 1764282186.021419
[2025-11-27 23:43:34] 2025-11-28 04:42:56,487 | INFO     | mean y: 2791244.75502008
[2025-11-27 23:43:34] 2025-11-28 04:42:56,487 | INFO     | intersect: -5381026960.450684
[2025-11-27 23:43:34] 2025-11-28 04:42:56,487 | INFO     | chi2: 16.66058958561731
[2025-11-27 23:43:34] 2025-11-28 04:42:56,488 | INFO     | sum of square deviations: 126685921970.20468
[2025-11-27 23:43:34] 2025-11-28 04:42:56,498 | INFO     | sum of deviations: 628522040543.8739
[2025-11-27 23:43:34] 2025-11-28 04:42:56,499 | INFO     | mean x: 1764282033.541779
[2025-11-27 23:43:34] 2025-11-28 04:42:56,499 | INFO     | mean y: 2805087.48787062
[2025-11-27 23:43:34] 2025-11-28 04:42:56,499 | INFO     | intersect: -8750260182.679832
[2025-11-27 23:43:34] 2025-11-28 04:42:56,499 | INFO     | chi2: 13.41287184413144
[2025-11-27 23:43:34] 2025-11-28 04:42:56,499 | INFO     | current chi2=13.41287184413144 (change=19.493414232408362 %)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,500 | INFO     | right removable region: 741
[2025-11-27 23:43:34] 2025-11-28 04:42:56,500 | INFO     | sum of square deviations: 126684545200.20468
[2025-11-27 23:43:34] 2025-11-28 04:42:56,510 | INFO     | sum of deviations: 163641830623.7687
[2025-11-27 23:43:34] 2025-11-28 04:42:56,510 | INFO     | mean x: 1764282338.541779
[2025-11-27 23:43:34] 2025-11-28 04:42:56,510 | INFO     | mean y: 2804885.781671159
[2025-11-27 23:43:34] 2025-11-28 04:42:56,510 | INFO     | intersect: -2276166011.2594776
[2025-11-27 23:43:34] 2025-11-28 04:42:56,511 | INFO     | chi2: 14.107164346999932
[2025-11-27 23:43:34] 2025-11-28 04:42:56,511 | INFO     | current chi2=14.107164346999932 (change=15.3261397233006 %)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,511 | INFO     | left removable region: 10
[2025-11-27 23:43:34] 2025-11-28 04:42:56,512 | INFO     | sum of square deviations: 121134054543.57047
[2025-11-27 23:43:34] 2025-11-28 04:42:56,522 | INFO     | sum of deviations: 396244236879.06244
[2025-11-27 23:43:34] 2025-11-28 04:42:56,522 | INFO     | mean x: 1764282308.0861833
[2025-11-27 23:43:34] 2025-11-28 04:42:56,522 | INFO     | mean y: 2824326.5704514366
[2025-11-27 23:43:34] 2025-11-28 04:42:56,522 | INFO     | intersect: -5768357852.057834
[2025-11-27 23:43:34] 2025-11-28 04:42:56,523 | INFO     | chi2: 10.218899067849364
[2025-11-27 23:43:34] 2025-11-28 04:42:56,523 | INFO     | current memory leak: 3.27 B/s (using 731 data points, chi2=10.22)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,524 | INFO     | could have reported an average CPU frequency of 3117 MHz (28 samples)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,524 | INFO     | ..............................
[2025-11-27 23:43:34] 2025-11-28 04:42:56,524 | INFO     | . Timing measurements:
[2025-11-27 23:43:34] 2025-11-28 04:42:56,524 | INFO     | . get job = 0 s
[2025-11-27 23:43:34] 2025-11-28 04:42:56,524 | INFO     | . initial setup = 3 s
[2025-11-27 23:43:34] 2025-11-28 04:42:56,524 | INFO     | . payload setup = 11 s
[2025-11-27 23:43:34] 2025-11-28 04:42:56,524 | INFO     | . stage-in = 0 s
[2025-11-27 23:43:34] 2025-11-28 04:42:56,524 | INFO     | . payload execution = 45530 s
[2025-11-27 23:43:34] 2025-11-28 04:42:56,525 | INFO     | . stage-out = 7 s
[2025-11-27 23:43:34] 2025-11-28 04:42:56,525 | INFO     | . log creation = 0 s
[2025-11-27 23:43:34] 2025-11-28 04:42:56,525 | INFO     | ..............................
[2025-11-27 23:43:34] 2025-11-28 04:42:56,653 | INFO     | 
[2025-11-27 23:43:34] 2025-11-28 04:42:56,653 | INFO     | job summary report
[2025-11-27 23:43:34] 2025-11-28 04:42:56,653 | INFO     | --------------------------------------------------
[2025-11-27 23:43:34] 2025-11-28 04:42:56,653 | INFO     | PanDA job id: 6898378210
[2025-11-27 23:43:34] 2025-11-28 04:42:56,653 | INFO     | task id: 47556161
[2025-11-27 23:43:34] 2025-11-28 04:42:56,653 | INFO     | errors: (none)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,653 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:43:34] 2025-11-28 04:42:56,653 | INFO     | pilot state: finished 
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | transexitcode: 0
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | exeerrorcode: 0
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | exeerrordiag: 
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | exitcode: 0
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | exitmsg: OK
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | cpuconsumptiontime: 199429 s
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | nevents: 1000
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | neventsw: 0
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | pid: 3448392
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | pgrp: 3448392
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | corecount: 8
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | event service: False
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | sizes: {0: 2284316, 10: 2284578, 11: 2284606, 45546: 2330093, 45554: 2339087, 45555: 2339143, 45569: 2339517}
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | --------------------------------------------------
[2025-11-27 23:43:34] 2025-11-28 04:42:56,654 | INFO     | 
[2025-11-27 23:43:34] 2025-11-28 04:42:56,655 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 23:43:34] 2025-11-28 04:42:56,746 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,748 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:43:34] 2025-11-28 04:42:56,751 | INFO     | job 6898378210 has completed (purged errors)
[2025-11-27 23:43:34] 2025-11-28 04:42:56,751 | INFO     | overall cleanup function is called
[2025-11-27 23:43:34] 2025-11-28 04:42:57,786 | INFO     | --- collectZombieJob: --- 10, [3448392]
[2025-11-27 23:43:34] 2025-11-28 04:42:57,787 | INFO     | zombie collector waiting for pid 3448392
[2025-11-27 23:43:34] 2025-11-28 04:42:57,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:43:34] 2025-11-28 04:42:57,787 | INFO     | collected zombie processes
[2025-11-27 23:43:34] 2025-11-28 04:42:57,787 | INFO     | will attempt to kill all subprocesses of pid=3448392
[2025-11-27 23:43:34] 2025-11-28 04:42:58,759 | INFO     | process IDs to be killed: [3448392] (in reverse order)
[2025-11-27 23:43:34] 2025-11-28 04:42:58,987 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:43:34] 2025-11-28 04:42:58,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:43:34] 2025-11-28 04:42:59,035 | INFO     | did not find any defunct processes belonging to 3448392
[2025-11-27 23:43:34] 2025-11-28 04:42:59,111 | INFO     | did not find any defunct processes belonging to 3448392
[2025-11-27 23:43:34] 2025-11-28 04:42:59,119 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:43:34] 2025-11-28 04:42:59,119 | INFO     | ready for new job
[2025-11-27 23:43:34] 2025-11-28 04:42:59,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:43:34] 2025-11-28 04:42:59,131 | INFO     | ***************************************
[2025-11-27 23:43:34] 2025-11-28 04:42:59,131 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:43:34] 2025-11-28 04:42:59,131 | INFO     | ***************************************
[2025-11-27 23:43:34] 2025-11-28 04:42:59,131 | INFO     | 
[2025-11-27 23:43:34] 2025-11-28 04:42:59,144 | INFO     | architecture information:
[2025-11-27 23:43:34] 2025-11-28 04:42:59,159 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:43:34] 2025-11-28 04:42:59,247 | INFO     | cat /etc/os-release:
[2025-11-27 23:43:34] NAME="CentOS Linux"
[2025-11-27 23:43:34] VERSION="7 (Core)"
[2025-11-27 23:43:34] ID="centos"
[2025-11-27 23:43:34] ID_LIKE="rhel fedora"
[2025-11-27 23:43:34] VERSION_ID="7"
[2025-11-27 23:43:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:43:34] ANSI_COLOR="0;31"
[2025-11-27 23:43:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:43:34] HOME_URL="https://www.centos.org/"
[2025-11-27 23:43:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:43:34] 
[2025-11-27 23:43:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:43:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:43:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:43:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:43:34] 
[2025-11-27 23:43:34] 2025-11-28 04:42:59,247 | INFO     | ***************************************
[2025-11-27 23:43:34] 2025-11-28 04:42:59,751 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 23:43:34] 2025-11-28 04:42:59,926 | INFO     | sufficient remaining disk space (68122836992 B)
[2025-11-27 23:43:34] 2025-11-28 04:42:59,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:43:34] 2025-11-28 04:42:59,926 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:43:34] 2025-11-28 04:42:59,927 | INFO     | update_server=False
[2025-11-27 23:43:34] 2025-11-28 04:42:59,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:43:34] 2025-11-28 04:42:59,947 | INFO     | all data control threads have been joined
[2025-11-27 23:43:34] 2025-11-28 04:43:00,048 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 23:43:34] 2025-11-28 04:43:00,049 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 23:43:34] 2025-11-28 04:43:00,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:43:34] 2025-11-28 04:43:00,049 | INFO     | will abort loop
[2025-11-27 23:43:34] 2025-11-28 04:43:00,110 | INFO     | all payload control threads have been joined
[2025-11-27 23:43:34] 2025-11-28 04:43:00,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:43:34] 2025-11-28 04:43:00,965 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:00,967 | INFO     | [data] control thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,055 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,081 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,106 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,132 | INFO     | [payload] control thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,281 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,281 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,282 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,295 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,385 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,658 | INFO     | [job] validate thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:01,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:43:34] 2025-11-28 04:43:01,709 | INFO     | all job control threads have been joined
[2025-11-27 23:43:34] 2025-11-28 04:43:02,584 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:02,686 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:02,716 | INFO     | [job] control thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:02,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:43:34] 2025-11-28 04:43:06,935 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:43:34] 2025-11-28 04:43:26,013 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:43:34] 2025-11-28 04:43:28,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711268591424)>', '<ExcThread(monitor, started 139710638839552)>']
[2025-11-27 23:43:34] 2025-11-28 04:43:29,094 | INFO     | PID=3439551 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 23:43:34] 2025-11-28 04:43:29,094 | INFO     | .. there are 68 such processes running
[2025-11-27 23:43:34] 2025-11-28 04:43:29,094 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:43:34] 2025-11-28 04:43:29,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:43:34] 2025-11-28 04:43:29,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:43:34] 2025-11-28 04:43:29,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:43:34] 2025-11-28 04:43:29,095 | INFO     | [monitor] control thread has ended
[2025-11-27 23:43:34] 2025-11-28 04:43:33,129 | INFO     | all workflow threads have been joined
[2025-11-27 23:43:34] 2025-11-28 04:43:33,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:43:34] 2025-11-28 04:43:33,130 | INFO     | traces error code: 0
[2025-11-27 23:43:34] 2025-11-28 04:43:33,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:43:34] 2025-11-28 04:43:33,344 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:43:34] 2025-11-28 04:43:33,348 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:43:34] 2025-11-28 04:43:33,350 [wrapper] pilotpid: 3439551
[2025-11-27 23:43:34] 2025-11-28 04:43:33,354 [wrapper] Pilot exit status: 0
[2025-11-27 23:43:34] 2025-11-28 04:43:33,371 [wrapper] pandaids: 6898378210
[2025-11-27 23:43:34] 2025-11-28 04:43:33,531 [wrapper] cleanup supervisor_pilot 3632136 3439552
[2025-11-27 23:43:34] 2025-11-28 04:43:33,534 [wrapper] Test setup, not cleaning
[2025-11-27 23:43:34] 2025-11-28 04:43:33,553 [wrapper] apfmon messages muted
[2025-11-27 23:43:34] 2025-11-28 04:43:33,586 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:43:34] 2025-11-28 04:43:33,609 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:43:34]  *** Error codes and diagnostics ***
[2025-11-27 23:43:34]     "exeErrorCode": 0,
[2025-11-27 23:43:34]     "exeErrorDiag": "",
[2025-11-27 23:43:34]     "pilotErrorCode": 0,
[2025-11-27 23:43:34]     "pilotErrorDiag": "",
[2025-11-27 23:43:34]  *** Listing of results directory ***
[2025-11-27 23:43:34] total 1320260
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 23:43:34] -rwx------. 1 boincer umatlas     36292 Nov 26 11:35 runpilot2-wrapper.sh
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:35 queuedata.json
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas       100 Nov 27 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:43:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 11:02 run_atlas
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas       105 Nov 27 11:02 job.xml
[2025-11-27 23:43:34] -rw-r--r--. 2 boincer umatlas 410607638 Nov 27 11:02 EVNT.47483658._002595.pool.root.1
[2025-11-27 23:43:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 11:02 start_atlas.sh
[2025-11-27 23:43:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 11:02 shared
[2025-11-27 23:43:34] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 11:02 input.tar.gz
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas         0 Nov 27 11:02 boinc_lockfile
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 11:02 pandaJob.out
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas        57 Nov 27 11:02 setup.sh.local
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas    991572 Nov 27 11:03 agis_schedconf.cvmfs.json
[2025-11-27 23:43:34] drwx------. 5 boincer umatlas      4096 Nov 27 11:03 pilot3
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas       533 Nov 27 23:18 boinc_task_state.xml
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 23:39 init_data.xml
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas 922682130 Nov 27 23:41 HITS.47556161._005773.pool.root.1
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas      1050 Nov 27 23:42 memory_monitor_summary.json
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas   1516240 Nov 27 23:42 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas   1933398 Nov 27 23:42 log.47556161._005773.job.log.tgz.1
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas        95 Nov 27 23:42 pilot_heartbeat.json
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas      8592 Nov 27 23:42 heartbeat.json
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 23:43 boinc_mmap_file
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas        29 Nov 27 23:43 wrapper_checkpoint.txt
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas      5010 Nov 27 23:43 pilotlog.txt
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas   5428982 Nov 27 23:43 log.47556161._005773.job.log.1
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas       353 Nov 27 23:43 output.list
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas       620 Nov 27 23:43 runtime_log
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas   7383040 Nov 27 23:43 result.tar.gz
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 23:43 runtime_log.err
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas       659 Nov 27 23:43 Rf2NDmefXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm49MKDmlrZuom.diag
[2025-11-27 23:43:34] -rw-r--r--. 1 boincer umatlas     21745 Nov 27 23:43 stderr.txt
[2025-11-27 23:43:34] HITS file was successfully produced:
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas 922682130 Nov 27 23:41 shared/HITS.pool.root.1
[2025-11-27 23:43:34]  *** Contents of shared directory: ***
[2025-11-27 23:43:34] total 1309864
[2025-11-27 23:43:34] -rw-r--r--. 2 boincer umatlas 410607638 Nov 27 11:02 ATLAS.root_0
[2025-11-27 23:43:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 11:02 start_atlas.sh
[2025-11-27 23:43:34] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 11:02 input.tar.gz
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas 922682130 Nov 27 23:41 HITS.pool.root.1
[2025-11-27 23:43:34] -rw-------. 1 boincer umatlas   7383040 Nov 27 23:43 result.tar.gz
23:43:56 (3428740): run_atlas exited; CPU time 199864.274406
23:43:56 (3428740): called boinc_finish(0)

</stderr_txt>
]]>

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