Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:32:17 (3460869): wrapper (7.7.26015): starting
10:32:17 (3460869): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 10:32:17] Arguments: --nthreads 12
[2025-11-27 10:32:17] Threads: 12
[2025-11-27 10:32:17] Checking for CVMFS
[2025-11-27 10:32:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 10:32:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 10:32:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 10:32:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 10:32:22] 2.8.1.0 3461149 0 30180 153371 3 1 3996945 4096001 0 130560 0 0 0.000 1292 880 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 10:32:22] CVMFS is ok
[2025-11-27 10:32:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 10:32:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 10:32:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 10:32:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 10:32:22] Further information can be found at the LHC@home message board.
[2025-11-27 10:32:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 10:32:22] Checking for apptainer binary...
[2025-11-27 10:32:22] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-27 10:32:22] apptainer is not installed, using version from CVMFS
[2025-11-27 10:32:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 10:32:23] farmville.blisteringsheep.pec
[2025-11-27 10:32:23] apptainer works
[2025-11-27 10:32:23] Set ATHENA_PROC_NUMBER=12
[2025-11-27 10:32:23] Set ATHENA_CORE_NUMBER=12
[2025-11-27 10:32:23] Starting ATLAS job with PandaID=6899116220
[2025-11-27 10:32:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/48 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:29:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:29:36] 2025-11-27 21:29:00,879 | INFO     | time since job start (21378s) is within the limit (172800.0s)
[2025-11-27 16:29:36] 2025-11-27 21:29:01,595 | INFO     | monitor loop #1561: job 0:6899116220 is in state 'finished'
[2025-11-27 16:29:36] 2025-11-27 21:29:01,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:29:36] 2025-11-27 21:29:02,884 | INFO     | time since job start (21380s) is within the limit (172800.0s)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,054 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 16:29:36] 2025-11-27 21:29:03,060 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2962.5611041666657
[2025-11-27 16:29:36] 2025-11-27 21:29:03,067 | INFO     | using path: /var/lib/boinc/slots/48/PanDA_Pilot-6899116220/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,067 | INFO     | extracted standard info from prmon json
[2025-11-27 16:29:36] 2025-11-27 21:29:03,067 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:29:36] 2025-11-27 21:29:03,068 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:29:36] 2025-11-27 21:29:03,073 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:29:36] 2025-11-27 21:29:03,074 | INFO     | sum of square deviations: 13293607322.917177
[2025-11-27 16:29:36] 2025-11-27 21:29:03,076 | INFO     | sum of deviations: 400505740706.56555
[2025-11-27 16:29:36] 2025-11-27 21:29:03,077 | INFO     | mean x: 1764268233.077143
[2025-11-27 16:29:36] 2025-11-27 21:29:03,077 | INFO     | mean y: 3612117.645714286
[2025-11-27 16:29:36] 2025-11-27 21:29:03,077 | INFO     | intersect: -53149722288.09534
[2025-11-27 16:29:36] 2025-11-27 21:29:03,077 | INFO     | chi2: 5.401201234342944
[2025-11-27 16:29:36] 2025-11-27 21:29:03,078 | INFO     | sum of square deviations: 12731993283.727503
[2025-11-27 16:29:36] 2025-11-27 21:29:03,080 | INFO     | sum of deviations: 529068253144.0493
[2025-11-27 16:29:36] 2025-11-27 21:29:03,081 | INFO     | mean x: 1764268080.5855072
[2025-11-27 16:29:36] 2025-11-27 21:29:03,081 | INFO     | mean y: 3646975.4898550725
[2025-11-27 16:29:36] 2025-11-27 21:29:03,081 | INFO     | intersect: -73309165140.59583
[2025-11-27 16:29:36] 2025-11-27 21:29:03,081 | INFO     | chi2: 2.7573347415635974
[2025-11-27 16:29:36] 2025-11-27 21:29:03,081 | INFO     | current chi2=2.7573347415635974 (change=48.94960172875271 %)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,082 | INFO     | sum of square deviations: 12186384333.353004
[2025-11-27 16:29:36] 2025-11-27 21:29:03,085 | INFO     | sum of deviations: 546335098237.5592
[2025-11-27 16:29:36] 2025-11-27 21:29:03,085 | INFO     | mean x: 1764267928.0882354
[2025-11-27 16:29:36] 2025-11-27 21:29:03,085 | INFO     | mean y: 3651740.814705882
[2025-11-27 16:29:36] 2025-11-27 21:29:03,085 | INFO     | intersect: -79091300908.21727
[2025-11-27 16:29:36] 2025-11-27 21:29:03,085 | INFO     | chi2: 2.5031742036332054
[2025-11-27 16:29:36] 2025-11-27 21:29:03,085 | INFO     | current chi2=2.5031742036332054 (change=9.217616348832044 %)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,086 | INFO     | right removable region: 339
[2025-11-27 16:29:36] 2025-11-27 21:29:03,086 | INFO     | sum of square deviations: 12731870063.727503
[2025-11-27 16:29:36] 2025-11-27 21:29:03,089 | INFO     | sum of deviations: 273716950577.86954
[2025-11-27 16:29:36] 2025-11-27 21:29:03,089 | INFO     | mean x: 1764268385.5855072
[2025-11-27 16:29:36] 2025-11-27 21:29:03,089 | INFO     | mean y: 3646440.1739130435
[2025-11-27 16:29:36] 2025-11-27 21:29:03,089 | INFO     | intersect: -37925594125.92284
[2025-11-27 16:29:36] 2025-11-27 21:29:03,089 | INFO     | chi2: 3.0976541913608306
[2025-11-27 16:29:36] 2025-11-27 21:29:03,090 | INFO     | current chi2=3.0976541913608306 (change=42.648791315814385 %)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,090 | INFO     | sum of square deviations: 12186221341.353003
[2025-11-27 16:29:36] 2025-11-27 21:29:03,093 | INFO     | sum of deviations: 237938272624.44128
[2025-11-27 16:29:36] 2025-11-27 21:29:03,093 | INFO     | mean x: 1764268538.0882354
[2025-11-27 16:29:36] 2025-11-27 21:29:03,093 | INFO     | mean y: 3656427.9852941176
[2025-11-27 16:29:36] 2025-11-27 21:29:03,093 | INFO     | intersect: -34444019897.558556
[2025-11-27 16:29:36] 2025-11-27 21:29:03,093 | INFO     | chi2: 3.0221724206451452
[2025-11-27 16:29:36] 2025-11-27 21:29:03,094 | INFO     | current chi2=3.0221724206451452 (change=2.4367397408722855 %)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,094 | INFO     | left removable region: 20
[2025-11-27 16:29:36] 2025-11-27 21:29:03,094 | INFO     | sum of square deviations: 10064696296.833841
[2025-11-27 16:29:36] 2025-11-27 21:29:03,096 | INFO     | sum of deviations: 334531851575.4511
[2025-11-27 16:29:36] 2025-11-27 21:29:03,096 | INFO     | mean x: 1764268507.5956113
[2025-11-27 16:29:36] 2025-11-27 21:29:03,097 | INFO     | mean y: 3712762.60815047
[2025-11-27 16:29:36] 2025-11-27 21:29:03,097 | INFO     | intersect: -58637302635.72876
[2025-11-27 16:29:36] 2025-11-27 21:29:03,097 | INFO     | chi2: 0.07927290502595032
[2025-11-27 16:29:36] 2025-11-27 21:29:03,097 | INFO     | current memory leak: 33.24 B/s (using 319 data points, chi2=0.08)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,098 | INFO     | could have reported an average CPU frequency of 2989 MHz (15 samples)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,098 | INFO     | ..............................
[2025-11-27 16:29:36] 2025-11-27 21:29:03,098 | INFO     | . Timing measurements:
[2025-11-27 16:29:36] 2025-11-27 21:29:03,098 | INFO     | . get job = 0 s
[2025-11-27 16:29:36] 2025-11-27 21:29:03,098 | INFO     | . initial setup = 3 s
[2025-11-27 16:29:36] 2025-11-27 21:29:03,098 | INFO     | . payload setup = 5 s
[2025-11-27 16:29:36] 2025-11-27 21:29:03,099 | INFO     | . stage-in = 0 s
[2025-11-27 16:29:36] 2025-11-27 21:29:03,099 | INFO     | . payload execution = 21346 s
[2025-11-27 16:29:36] 2025-11-27 21:29:03,099 | INFO     | . stage-out = 3 s
[2025-11-27 16:29:36] 2025-11-27 21:29:03,099 | INFO     | . log creation = 0 s
[2025-11-27 16:29:36] 2025-11-27 21:29:03,099 | INFO     | ..............................
[2025-11-27 16:29:36] 2025-11-27 21:29:03,169 | INFO     | 
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | job summary report
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | --------------------------------------------------
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | PanDA job id: 6899116220
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | task id: 47556173
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | errors: (none)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | pilot state: finished 
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | transexitcode: 0
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | exeerrorcode: 0
[2025-11-27 16:29:36] 2025-11-27 21:29:03,170 | INFO     | exeerrordiag: 
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | exitcode: 0
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | exitmsg: OK
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | cpuconsumptiontime: 246426 s
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | nevents: 1000
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | neventsw: 0
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | pid: 3473041
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | pgrp: 3473041
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | corecount: 12
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | event service: False
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | sizes: {0: 2284204, 1: 2284346, 5: 2284608, 11: 2284664, 21353: 2319266, 21358: 2328446, 21366: 2328636}
[2025-11-27 16:29:36] 2025-11-27 21:29:03,171 | INFO     | --------------------------------------------------
[2025-11-27 16:29:36] 2025-11-27 21:29:03,172 | INFO     | 
[2025-11-27 16:29:36] 2025-11-27 21:29:03,172 | INFO     | executing command: ls -lF /var/lib/boinc/slots/48
[2025-11-27 16:29:36] 2025-11-27 21:29:03,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,195 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:29:36] 2025-11-27 21:29:03,195 | INFO     | job 6899116220 has completed (purged errors)
[2025-11-27 16:29:36] 2025-11-27 21:29:03,195 | INFO     | overall cleanup function is called
[2025-11-27 16:29:36] 2025-11-27 21:29:04,211 | INFO     | --- collectZombieJob: --- 10, [3473041]
[2025-11-27 16:29:36] 2025-11-27 21:29:04,212 | INFO     | zombie collector waiting for pid 3473041
[2025-11-27 16:29:36] 2025-11-27 21:29:04,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:29:36] 2025-11-27 21:29:04,212 | INFO     | collected zombie processes
[2025-11-27 16:29:36] 2025-11-27 21:29:04,212 | INFO     | will attempt to kill all subprocesses of pid=3473041
[2025-11-27 16:29:36] 2025-11-27 21:29:04,403 | INFO     | process IDs to be killed: [3473041] (in reverse order)
[2025-11-27 16:29:36] 2025-11-27 21:29:04,457 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:29:36] 2025-11-27 21:29:04,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:29:36] 2025-11-27 21:29:04,465 | INFO     | did not find any defunct processes belonging to 3473041
[2025-11-27 16:29:36] 2025-11-27 21:29:04,471 | INFO     | did not find any defunct processes belonging to 3473041
[2025-11-27 16:29:36] 2025-11-27 21:29:04,472 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:29:36] 2025-11-27 21:29:04,472 | INFO     | ready for new job
[2025-11-27 16:29:36] 2025-11-27 21:29:04,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:29:36] 2025-11-27 21:29:04,476 | INFO     | ***************************************
[2025-11-27 16:29:36] 2025-11-27 21:29:04,476 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:29:36] 2025-11-27 21:29:04,476 | INFO     | ***************************************
[2025-11-27 16:29:36] 2025-11-27 21:29:04,476 | INFO     | 
[2025-11-27 16:29:36] 2025-11-27 21:29:04,478 | INFO     | architecture information:
[2025-11-27 16:29:36] 2025-11-27 21:29:04,479 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:29:36] 2025-11-27 21:29:04,493 | INFO     | cat /etc/os-release:
[2025-11-27 16:29:36] NAME="CentOS Linux"
[2025-11-27 16:29:36] VERSION="7 (Core)"
[2025-11-27 16:29:36] ID="centos"
[2025-11-27 16:29:36] ID_LIKE="rhel fedora"
[2025-11-27 16:29:36] VERSION_ID="7"
[2025-11-27 16:29:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:29:36] ANSI_COLOR="0;31"
[2025-11-27 16:29:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:29:36] HOME_URL="https://www.centos.org/"
[2025-11-27 16:29:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:29:36] 
[2025-11-27 16:29:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:29:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:29:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:29:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:29:36] 
[2025-11-27 16:29:36] 2025-11-27 21:29:04,493 | INFO     | ***************************************
[2025-11-27 16:29:36] 2025-11-27 21:29:04,996 | INFO     | executing command: df -mP /var/lib/boinc/slots/48
[2025-11-27 16:29:36] 2025-11-27 21:29:05,008 | INFO     | sufficient remaining disk space (339377913856 B)
[2025-11-27 16:29:36] 2025-11-27 21:29:05,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:29:36] 2025-11-27 21:29:05,008 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:29:36] 2025-11-27 21:29:05,008 | INFO     | update_server=False
[2025-11-27 16:29:36] 2025-11-27 21:29:05,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:29:36] 2025-11-27 21:29:05,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:29:36] 2025-11-27 21:29:05,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:29:36] 2025-11-27 21:29:05,104 | INFO     | aborting loop
[2025-11-27 16:29:36] 2025-11-27 21:29:05,146 | INFO     | all job control threads have been joined
[2025-11-27 16:29:36] 2025-11-27 21:29:05,539 | INFO     | all payload control threads have been joined
[2025-11-27 16:29:36] 2025-11-27 21:29:05,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:29:36] 2025-11-27 21:29:05,736 | INFO     | all data control threads have been joined
[2025-11-27 16:29:36] 2025-11-27 21:29:05,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:29:36] 2025-11-27 21:29:06,014 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,014 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,109 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,125 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,151 | INFO     | [job] control thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,366 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,545 | INFO     | [payload] control thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,552 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,677 | INFO     | [job] validate thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,712 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:06,742 | INFO     | [data] control thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:07,346 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:07,447 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:07,569 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:07,737 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:09,843 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:29:36] 2025-11-27 21:29:17,063 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:29:36] 2025-11-27 21:29:18,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139707439159104)>', '<ExcThread(monitor, started 139706763310848)>']
[2025-11-27 16:29:36] 2025-11-27 21:29:23,830 | INFO     | all workflow threads have been joined
[2025-11-27 16:29:36] 2025-11-27 21:29:23,830 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:29:36] 2025-11-27 21:29:23,831 | INFO     | traces error code: 0
[2025-11-27 16:29:36] 2025-11-27 21:29:23,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:29:36] 2025-11-27 21:29:36,186 | INFO     | PID=3465716 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 16:29:36] 2025-11-27 21:29:36,187 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:29:36] 2025-11-27 21:29:36,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:29:36] 2025-11-27 21:29:36,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:29:36] 2025-11-27 21:29:36,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:29:36] 2025-11-27 21:29:36,187 | INFO     | [monitor] control thread has ended
[2025-11-27 16:29:36] 2025-11-27 21:29:36,315 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:29:36] 2025-11-27 21:29:36,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:29:36] 2025-11-27 21:29:36,321 [wrapper] pilotpid: 3465716
[2025-11-27 16:29:36] 2025-11-27 21:29:36,323 [wrapper] Pilot exit status: 0
[2025-11-27 16:29:36] 2025-11-27 21:29:36,331 [wrapper] pandaids: 6899116220
[2025-11-27 16:29:36] 2025-11-27 21:29:36,375 [wrapper] cleanup supervisor_pilot 3944712 3465717
[2025-11-27 16:29:36] 2025-11-27 21:29:36,377 [wrapper] Test setup, not cleaning
[2025-11-27 16:29:36] 2025-11-27 21:29:36,380 [wrapper] apfmon messages muted
[2025-11-27 16:29:36] 2025-11-27 21:29:36,381 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:29:36] 2025-11-27 21:29:36,383 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:29:36]  *** Error codes and diagnostics ***
[2025-11-27 16:29:36]     "exeErrorCode": 0,
[2025-11-27 16:29:36]     "exeErrorDiag": "",
[2025-11-27 16:29:36]     "pilotErrorCode": 0,
[2025-11-27 16:29:36]     "pilotErrorDiag": "",
[2025-11-27 16:29:36]  *** Listing of results directory ***
[2025-11-27 16:29:36] total 1316428
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc      5112 Nov 26 20:25 queuedata.json
[2025-11-27 16:29:36] -rwx------ 1 boinc boinc     36292 Nov 26 20:25 runpilot2-wrapper.sh
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc       100 Nov 27 10:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:29:36] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 10:32 run_atlas
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc       105 Nov 27 10:32 job.xml
[2025-11-27 16:29:36] -rw-r--r-- 2 boinc boinc 412477928 Nov 27 10:32 EVNT.47483658._003276.pool.root.1
[2025-11-27 16:29:36] drwxrwx--x 1 boinc boinc        76 Nov 27 10:32 shared
[2025-11-27 16:29:36] -rw-r--r-- 2 boinc boinc    590111 Nov 27 10:32 input.tar.gz
[2025-11-27 16:29:36] -rw-r--r-- 2 boinc boinc     15847 Nov 27 10:32 start_atlas.sh
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc         0 Nov 27 10:32 boinc_setup_complete
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc      9261 Nov 27 10:32 init_data.xml
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc         0 Nov 27 10:32 boinc_lockfile
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc      2788 Nov 27 10:32 pandaJob.out
[2025-11-27 16:29:36] -rw------- 1 boinc boinc    991572 Nov 27 10:32 agis_schedconf.cvmfs.json
[2025-11-27 16:29:36] drwx------ 1 boinc boinc       414 Nov 27 10:32 pilot3
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc       533 Nov 27 16:20 boinc_task_state.xml
[2025-11-27 16:29:36] -rw------- 1 boinc boinc 921450041 Nov 27 16:28 HITS.47556173._002324.pool.root.1
[2025-11-27 16:29:36] -rw------- 1 boinc boinc      1049 Nov 27 16:28 memory_monitor_summary.json
[2025-11-27 16:29:36] -rw------- 1 boinc boinc   1516240 Nov 27 16:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:29:36] -rw------- 1 boinc boinc   2132805 Nov 27 16:28 log.47556173._002324.job.log.tgz.1
[2025-11-27 16:29:36] -rw------- 1 boinc boinc      8635 Nov 27 16:29 heartbeat.json
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc      8192 Nov 27 16:29 boinc_mmap_file
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc        29 Nov 27 16:29 wrapper_checkpoint.txt
[2025-11-27 16:29:36] -rw------- 1 boinc boinc        95 Nov 27 16:29 pilot_heartbeat.json
[2025-11-27 16:29:36] -rw------- 1 boinc boinc       747 Nov 27 16:29 pilotlog.txt
[2025-11-27 16:29:36] -rw------- 1 boinc boinc   2963603 Nov 27 16:29 log.47556173._002324.job.log.1
[2025-11-27 16:29:36] -rw------- 1 boinc boinc       353 Nov 27 16:29 output.list
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc       620 Nov 27 16:29 runtime_log
[2025-11-27 16:29:36] -rw------- 1 boinc boinc   5120000 Nov 27 16:29 result.tar.gz
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc      8921 Nov 27 16:29 runtime_log.err
[2025-11-27 16:29:36] -rw------- 1 boinc boinc       681 Nov 27 16:29 DmxLDmLwfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKUNKDmJL5DEn.diag
[2025-11-27 16:29:36] -rw-r--r-- 1 boinc boinc     21656 Nov 27 16:29 stderr.txt
[2025-11-27 16:29:36] HITS file was successfully produced:
[2025-11-27 16:29:36] -rw------- 1 boinc boinc 921450041 Nov 27 16:28 shared/HITS.pool.root.1
[2025-11-27 16:29:36]  *** Contents of shared directory: ***
[2025-11-27 16:29:36] total 1308264
[2025-11-27 16:29:36] -rw-r--r-- 2 boinc boinc 412477928 Nov 27 10:32 ATLAS.root_0
[2025-11-27 16:29:36] -rw-r--r-- 2 boinc boinc    590111 Nov 27 10:32 input.tar.gz
[2025-11-27 16:29:36] -rw-r--r-- 2 boinc boinc     15847 Nov 27 10:32 start_atlas.sh
[2025-11-27 16:29:36] -rw------- 1 boinc boinc 921450041 Nov 27 16:28 HITS.pool.root.1
[2025-11-27 16:29:36] -rw------- 1 boinc boinc   5120000 Nov 27 16:29 result.tar.gz
16:29:38 (3460869): run_atlas exited; CPU time 246566.200778
16:29:38 (3460869): called boinc_finish(0)

</stderr_txt>
]]>

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