Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:42:28 (1318083): wrapper (7.7.26015): starting
07:42:28 (1318083): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 07:42:28] Arguments: --nthreads 12
[2025-11-27 07:42:28] Threads: 12
[2025-11-27 07:42:28] Checking for CVMFS
[2025-11-27 07:42:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 07:42:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 07:42:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 07:42:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 07:42:30] 2.11.5.0 2885516 29971 235468 153371 0 246 23361370 45568000 12569 130560 0 275882094 99.758 194310334 10774 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-27 07:42:30] CVMFS is ok
[2025-11-27 07:42:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 07:42:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 07:42:30] Further information can be found at the LHC@home message board.
[2025-11-27 07:42:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 07:42:30] Checking for apptainer binary...
[2025-11-27 07:42:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 07:42:30] Running /usr/bin/apptainer --version
[2025-11-27 07:42:31] apptainer version 1.4.1-1.el9
[2025-11-27 07:42:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 07:42:31] wns0089.triumf.lcg
[2025-11-27 07:42:31] apptainer works
[2025-11-27 07:42:31] Set ATHENA_PROC_NUMBER=12
[2025-11-27 07:42:31] Set ATHENA_CORE_NUMBER=12
[2025-11-27 07:42:31] Starting ATLAS job with PandaID=6899106283
[2025-11-27 07:42:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:48:06]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:48:06] 2025-11-27 15:47:02,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 07:48:06] 2025-11-27 15:47:02,788 | WARNING  | wrong length of table data, x=[1764258240.0], y=[878.0] (must be same and length>=4)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | could have reported an average CPU frequency of 2511 MHz (4 samples)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | ..............................
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . Timing measurements:
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . get job = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . initial setup = 3 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . payload setup = 12 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . stage-in = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . payload execution = 69 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . stage-out = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . log creation = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | ..............................
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 07:48:06] 2025-11-27 15:47:02,790 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6899106283/pilotlog.txt
[2025-11-27 07:48:06] 2025-11-27 15:47:02,800 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-27 07:48:06] - Log from pilotlog.txt -
[2025-11-27 07:48:06] 2025-11-27 15:47:02,786 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6899106283/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,787 | INFO     | extracted standard info from prmon json
[2025-11-27 07:48:06] 2025-11-27 15:47:02,787 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:48:06] 2025-11-27 15:47:02,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:48:06] 2025-11-27 15:47:02,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 07:48:06] 2025-11-27 15:47:02,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 07:48:06] 2025-11-27 15:47:02,788 | WARNING  | wrong length of table data, x=[1764258240.0], y=[878.0] (must be same and length>=4)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | could have reported an average CPU frequency of 2511 MHz (4 samples)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | ..............................
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . Timing measurements:
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . get job = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . initial setup = 3 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . payload setup = 12 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . stage-in = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . payload execution = 69 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . stage-out = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . log creation = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | ..............................
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 07:48:06] 2025-11-27 15:47:02,790 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6899106283/pilotlog.txt
[2025-11-27 07:48:06] 2025-11-27 15:47:02,801 | WARNING  | 
[2025-11-27 07:48:06] [begin log extracts]
[2025-11-27 07:48:06] - Log from pilotlog.txt -
[2025-11-27 07:48:06] 2025-11-27 15:47:02,786 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6899106283/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,787 | INFO     | extracted standard info from prmon json
[2025-11-27 07:48:06] 2025-11-27 15:47:02,787 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:48:06] 2025-11-27 15:47:02,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:48:06] 2025-11-27 15:47:02,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 07:48:06] 2025-11-27 15:47:02,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 07:48:06] 2025-11-27 15:47:02,788 | WARNING  | wrong length of table data, x=[1764258240.0], y=[878.0] (must be same and length>=4)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | could have reported an average CPU frequency of 2511 MHz (4 samples)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | ..............................
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . Timing measurements:
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . get job = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . initial setup = 3 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . payload setup = 12 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . stage-in = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . payload execution = 69 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . stage-out = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | . log creation = 0 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | ..............................
[2025-11-27 07:48:06] 2025-11-27 15:47:02,789 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 07:48:06] 2025-11-27 15:47:02,790 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6899106283/pilotlog.txt
[2025-11-27 07:48:06] [end log extracts]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,801 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,801 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | 
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | job summary report
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | --------------------------------------------------
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | PanDA job id: 6899106283
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | task id: 47556173
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-27 07:44:52,703 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | pilot state: failed 
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | transexitcode: 65
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | exeerrorcode: 65
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | exitcode: 65
[2025-11-27 07:48:06] 2025-11-27 15:47:02,856 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | cpuconsumptiontime: 45 s
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | nevents: 0
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | neventsw: 0
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | pid: 1328410
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | pgrp: 1328410
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | corecount: 12
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | event service: False
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | sizes: {0: 2284142, 1: 2284341, 12: 2284341, 19: 2284631, 23: 2284659, 86: 2310184, 88: 2314474, 90: 2314502, 209: 2314668}
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | --------------------------------------------------
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | 
[2025-11-27 07:48:06] 2025-11-27 15:47:02,857 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-27 07:48:06] 2025-11-27 15:47:02,872 | INFO     | time since job start (242s) is within the limit (172800.0s)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:48:06] 2025-11-27 15:47:02,874 | INFO     | job 6899106283 has completed (purged errors)
[2025-11-27 07:48:06] 2025-11-27 15:47:02,874 | INFO     | overall cleanup function is called
[2025-11-27 07:48:06] 2025-11-27 15:47:03,882 | INFO     | --- collectZombieJob: --- 10, [1328410]
[2025-11-27 07:48:06] 2025-11-27 15:47:03,882 | INFO     | zombie collector waiting for pid 1328410
[2025-11-27 07:48:06] 2025-11-27 15:47:03,883 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:48:06] 2025-11-27 15:47:03,883 | INFO     | collected zombie processes
[2025-11-27 07:48:06] 2025-11-27 15:47:03,883 | INFO     | will attempt to kill all subprocesses of pid=1328410
[2025-11-27 07:48:06] 2025-11-27 15:47:04,040 | INFO     | process IDs to be killed: [1328410] (in reverse order)
[2025-11-27 07:48:06] 2025-11-27 15:47:04,103 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:48:06] 2025-11-27 15:47:04,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:48:06] 2025-11-27 15:47:04,110 | INFO     | did not find any defunct processes belonging to 1328410
[2025-11-27 07:48:06] 2025-11-27 15:47:04,117 | INFO     | did not find any defunct processes belonging to 1328410
[2025-11-27 07:48:06] 2025-11-27 15:47:04,118 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:48:06] 2025-11-27 15:47:04,118 | INFO     | ready for new job
[2025-11-27 07:48:06] 2025-11-27 15:47:04,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:48:06] 2025-11-27 15:47:04,120 | INFO     | ***************************************
[2025-11-27 07:48:06] 2025-11-27 15:47:04,120 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:48:06] 2025-11-27 15:47:04,120 | INFO     | ***************************************
[2025-11-27 07:48:06] 2025-11-27 15:47:04,120 | INFO     | 
[2025-11-27 07:48:06] 2025-11-27 15:47:04,122 | INFO     | architecture information:
[2025-11-27 07:48:06] 2025-11-27 15:47:04,122 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:48:06] 2025-11-27 15:47:04,133 | INFO     | cat /etc/os-release:
[2025-11-27 07:48:06] NAME="CentOS Linux"
[2025-11-27 07:48:06] VERSION="7 (Core)"
[2025-11-27 07:48:06] ID="centos"
[2025-11-27 07:48:06] ID_LIKE="rhel fedora"
[2025-11-27 07:48:06] VERSION_ID="7"
[2025-11-27 07:48:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:48:06] ANSI_COLOR="0;31"
[2025-11-27 07:48:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:48:06] HOME_URL="https://www.centos.org/"
[2025-11-27 07:48:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:48:06] 
[2025-11-27 07:48:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:48:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:48:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:48:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:48:06] 
[2025-11-27 07:48:06] 2025-11-27 15:47:04,133 | INFO     | ***************************************
[2025-11-27 07:48:06] 2025-11-27 15:47:04,635 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-27 07:48:06] 2025-11-27 15:47:04,647 | INFO     | sufficient remaining disk space (2134956310528 B)
[2025-11-27 07:48:06] 2025-11-27 15:47:04,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:48:06] 2025-11-27 15:47:04,648 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:48:06] 2025-11-27 15:47:04,648 | INFO     | update_server=False
[2025-11-27 07:48:06] 2025-11-27 15:47:04,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:48:06] 2025-11-27 15:47:04,648 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 07:48:06] 2025-11-27 15:47:04,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:48:06] 2025-11-27 15:47:04,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:48:06] 2025-11-27 15:47:04,649 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:48:06] 2025-11-27 15:47:04,649 | INFO     | aborting loop
[2025-11-27 07:48:06] 2025-11-27 15:47:04,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:48:06] 2025-11-27 15:47:04,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:48:06] 2025-11-27 15:47:04,731 | INFO     | all job control threads have been joined
[2025-11-27 07:48:06] 2025-11-27 15:47:04,806 | INFO     | all data control threads have been joined
[2025-11-27 07:48:06] 2025-11-27 15:47:05,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:48:06] 2025-11-27 15:47:05,653 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:05,654 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:05,654 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:05,735 | INFO     | [job] control thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:05,753 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:05,779 | INFO     | all payload control threads have been joined
[2025-11-27 07:48:06] 2025-11-27 15:47:05,812 | INFO     | [data] control thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:05,877 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:06,212 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:06,348 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:06,556 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:06,784 | INFO     | [payload] control thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:06,870 | INFO     | [job] validate thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:06,874 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:06,897 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:07,069 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:47:07,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:48:06] 2025-11-27 15:47:11,243 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:48:06] 2025-11-27 15:48:00,070 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:48:06] 2025-11-27 15:48:01,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318801262400)>', '<ExcThread(monitor, started 140317957273344)>']
[2025-11-27 07:48:06] 2025-11-27 15:48:01,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:48:06] 2025-11-27 15:48:01,916 | INFO     | [monitor] control thread has ended
[2025-11-27 07:48:06] 2025-11-27 15:48:06,033 | INFO     | all workflow threads have been joined
[2025-11-27 07:48:06] 2025-11-27 15:48:06,033 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:48:06] 2025-11-27 15:48:06,034 | INFO     | traces error code: 0
[2025-11-27 07:48:06] 2025-11-27 15:48:06,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:48:06] 2025-11-27 15:48:06,154 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:48:06] 2025-11-27 15:48:06,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:48:06] 2025-11-27 15:48:06,158 [wrapper] pilotpid: 1321798
[2025-11-27 07:48:06] 2025-11-27 15:48:06,160 [wrapper] Pilot exit status: 0
[2025-11-27 07:48:06] 2025-11-27 15:48:06,167 [wrapper] pandaids: 6899106283
[2025-11-27 07:48:06] 2025-11-27 15:48:06,214 [wrapper] cleanup supervisor_pilot 1321804 1321799
[2025-11-27 07:48:06] 2025-11-27 15:48:06,217 [wrapper] Test setup, not cleaning
[2025-11-27 07:48:06] 2025-11-27 15:48:06,219 [wrapper] apfmon messages muted
[2025-11-27 07:48:06] 2025-11-27 15:48:06,221 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:48:06] 2025-11-27 15:48:06,223 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:48:06]  *** Error codes and diagnostics ***
[2025-11-27 07:48:06]     "exeErrorCode": 65,
[2025-11-27 07:48:06]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-27 07:48:06]     "pilotErrorCode": 1305,
[2025-11-27 07:48:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-27 07:48:06]  *** Listing of results directory ***
[2025-11-27 07:48:06] total 406640
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc    576529 Nov 26 17:09 pilot3.tar.gz
[2025-11-27 07:48:06] -rwx------. 1 boinc boinc     36292 Nov 26 17:26 runpilot2-wrapper.sh
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc      5112 Nov 26 17:26 queuedata.json
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc       100 Nov 27 07:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:48:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 07:42 run_atlas
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc       105 Nov 27 07:42 job.xml
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc      6596 Nov 27 07:42 init_data.xml
[2025-11-27 07:48:06] -rw-r--r--. 2 boinc boinc 412198633 Nov 27 07:42 EVNT.47483658._003254.pool.root.1
[2025-11-27 07:48:06] -rw-r--r--. 2 boinc boinc     15847 Nov 27 07:42 start_atlas.sh
[2025-11-27 07:48:06] drwxrwx--x. 2 boinc boinc      4096 Nov 27 07:42 shared
[2025-11-27 07:48:06] -rw-r--r--. 2 boinc boinc    590108 Nov 27 07:42 input.tar.gz
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc         0 Nov 27 07:42 boinc_lockfile
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc      2787 Nov 27 07:42 pandaJob.out
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc    991572 Nov 27 07:42 agis_schedconf.cvmfs.json
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc   1516240 Nov 27 07:42 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:48:06] drwx------. 5 boinc boinc      4096 Nov 27 07:43 pilot3
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc       525 Nov 27 07:44 boinc_task_state.xml
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc       961 Nov 27 07:44 memory_monitor_summary.json
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc     49148 Nov 27 07:45 log.47556173._002105.job.log.tgz.1
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc        95 Nov 27 07:46 pilot_heartbeat.json
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc     10319 Nov 27 07:47 heartbeat.json
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc      8192 Nov 27 07:48 boinc_mmap_file
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc        23 Nov 27 07:48 wrapper_checkpoint.txt
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc      4551 Nov 27 07:48 pilotlog.txt
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc     96541 Nov 27 07:48 log.47556173._002105.job.log.1
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc       186 Nov 27 07:48 output.list
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc       620 Nov 27 07:48 runtime_log
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc    163840 Nov 27 07:48 result.tar.gz
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc      8636 Nov 27 07:48 runtime_log.err
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc       644 Nov 27 07:48 eMWNDmTxfi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmANKKDmhl4fVn.diag
[2025-11-27 07:48:06] -rw-r--r--. 1 boinc boinc     22364 Nov 27 07:48 stderr.txt
[2025-11-27 07:48:06] No HITS result produced
[2025-11-27 07:48:06]  *** Contents of shared directory: ***
[2025-11-27 07:48:06] total 403300
[2025-11-27 07:48:06] -rw-r--r--. 2 boinc boinc 412198633 Nov 27 07:42 ATLAS.root_0
[2025-11-27 07:48:06] -rw-r--r--. 2 boinc boinc     15847 Nov 27 07:42 start_atlas.sh
[2025-11-27 07:48:06] -rw-r--r--. 2 boinc boinc    590108 Nov 27 07:42 input.tar.gz
[2025-11-27 07:48:06] -rw-------. 1 boinc boinc    163840 Nov 27 07:48 result.tar.gz
07:48:07 (1318083): run_atlas exited; CPU time 46.215459
07:48:07 (1318083): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN