Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:19:01 (848776): wrapper (7.7.26015): starting
12:19:01 (848776): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 12:19:01] Arguments: --nthreads 8
[2025-11-27 12:19:01] Threads: 8
[2025-11-27 12:19:01] Checking for CVMFS
[2025-11-27 12:19:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 12:19:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 12:19:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 12:19:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 12:19:02] 2.13.3.0 11460 31781 324052 153377 1 299 19328729 32935936 58798 16776704 0 413701063 99.726 279554249 35049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 12:19:02] CVMFS is ok
[2025-11-27 12:19:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 12:19:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 12:19:02] Further information can be found at the LHC@home message board.
[2025-11-27 12:19:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 12:19:02] Checking for apptainer binary...
[2025-11-27 12:19:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 12:19:02] Running /usr/bin/apptainer --version
[2025-11-27 12:19:02] apptainer version 1.4.4-1.el9
[2025-11-27 12:19:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 12:19:03] c7-3-34.aglt2.org
[2025-11-27 12:19:03] apptainer works
[2025-11-27 12:19:03] Set ATHENA_PROC_NUMBER=8
[2025-11-27 12:19:03] Set ATHENA_CORE_NUMBER=8
[2025-11-27 12:19:03] Starting ATLAS job with PandaID=6898378273
[2025-11-27 12:19:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:58:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:58:48] 2025-11-28 02:58:13,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:58:48] 2025-11-28 02:58:14,521 | INFO     | time since job start (34715s) is within the limit (172800.0s)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,109 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 21:58:48] 2025-11-28 02:58:15,114 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3310.8849791666667
[2025-11-27 21:58:48] 2025-11-28 02:58:15,129 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6898378273/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,129 | INFO     | extracted standard info from prmon json
[2025-11-27 21:58:48] 2025-11-28 02:58:15,129 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:58:48] 2025-11-28 02:58:15,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:58:48] 2025-11-28 02:58:15,137 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:58:48] 2025-11-28 02:58:15,138 | INFO     | sum of square deviations: 56822595452.67437
[2025-11-27 21:58:48] 2025-11-28 02:58:15,144 | INFO     | sum of deviations: 1480460387484.113
[2025-11-27 21:58:48] 2025-11-28 02:58:15,144 | INFO     | mean x: 1764281343.653169
[2025-11-27 21:58:48] 2025-11-28 02:58:15,145 | INFO     | mean y: 3050646.7975352113
[2025-11-27 21:58:48] 2025-11-28 02:58:15,145 | INFO     | intersect: -45963674752.62858
[2025-11-27 21:58:48] 2025-11-28 02:58:15,145 | INFO     | chi2: 6.3804268692808686
[2025-11-27 21:58:48] 2025-11-28 02:58:15,146 | INFO     | sum of square deviations: 55335189447.55595
[2025-11-27 21:58:48] 2025-11-28 02:58:15,152 | INFO     | sum of deviations: 1644366295148.1653
[2025-11-27 21:58:48] 2025-11-28 02:58:15,153 | INFO     | mean x: 1764281191.1545293
[2025-11-27 21:58:48] 2025-11-28 02:58:15,153 | INFO     | mean y: 3067434.1705150977
[2025-11-27 21:58:48] 2025-11-28 02:58:15,153 | INFO     | intersect: -52425135213.40356
[2025-11-27 21:58:48] 2025-11-28 02:58:15,153 | INFO     | chi2: 3.9119655877239192
[2025-11-27 21:58:48] 2025-11-28 02:58:15,154 | INFO     | current chi2=3.9119655877239192 (change=38.68802718265725 %)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,154 | INFO     | sum of square deviations: 53873969979.93545
[2025-11-27 21:58:48] 2025-11-28 02:58:15,160 | INFO     | sum of deviations: 1651237671457.2146
[2025-11-27 21:58:48] 2025-11-28 02:58:15,160 | INFO     | mean x: 1764281038.655914
[2025-11-27 21:58:48] 2025-11-28 02:58:15,160 | INFO     | mean y: 3068131.9802867384
[2025-11-27 21:58:48] 2025-11-28 02:58:15,161 | INFO     | intersect: -54072161800.97812
[2025-11-27 21:58:48] 2025-11-28 02:58:15,161 | INFO     | chi2: 3.6836017086835904
[2025-11-27 21:58:48] 2025-11-28 02:58:15,162 | INFO     | current chi2=3.6836017086835904 (change=5.8375738211234305 %)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,163 | INFO     | right removable region: 557
[2025-11-27 21:58:48] 2025-11-28 02:58:15,163 | INFO     | sum of square deviations: 55335170780.86309
[2025-11-27 21:58:48] 2025-11-28 02:58:15,169 | INFO     | sum of deviations: 1301567777162.8403
[2025-11-27 21:58:48] 2025-11-28 02:58:15,169 | INFO     | mean x: 1764281496.152753
[2025-11-27 21:58:48] 2025-11-28 02:58:15,169 | INFO     | mean y: 3068953.490230906
[2025-11-27 21:58:48] 2025-11-28 02:58:15,169 | INFO     | intersect: -41495527921.3788
[2025-11-27 21:58:48] 2025-11-28 02:58:15,170 | INFO     | chi2: 3.975294705065442
[2025-11-27 21:58:48] 2025-11-28 02:58:15,170 | INFO     | current chi2=3.975294705065442 (change=37.69547419773979 %)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,170 | INFO     | sum of square deviations: 53874001697.15414
[2025-11-27 21:58:48] 2025-11-28 02:58:15,176 | INFO     | sum of deviations: 1256760071750.7822
[2025-11-27 21:58:48] 2025-11-28 02:58:15,176 | INFO     | mean x: 1764281648.6487455
[2025-11-27 21:58:48] 2025-11-28 02:58:15,177 | INFO     | mean y: 3073627.0448028673
[2025-11-27 21:58:48] 2025-11-28 02:58:15,177 | INFO     | intersect: -41153674739.42214
[2025-11-27 21:58:48] 2025-11-28 02:58:15,177 | INFO     | chi2: 3.9666374166330955
[2025-11-27 21:58:48] 2025-11-28 02:58:15,177 | INFO     | current chi2=3.9666374166330955 (change=0.21777727375318828 %)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,177 | INFO     | left removable region: 20
[2025-11-27 21:58:48] 2025-11-28 02:58:15,178 | INFO     | sum of square deviations: 48017549532.78203
[2025-11-27 21:58:48] 2025-11-28 02:58:15,183 | INFO     | sum of deviations: 1362574256093.9443
[2025-11-27 21:58:48] 2025-11-28 02:58:15,183 | INFO     | mean x: 1764281618.150838
[2025-11-27 21:58:48] 2025-11-28 02:58:15,184 | INFO     | mean y: 3098168.679702048
[2025-11-27 21:58:48] 2025-11-28 02:58:15,184 | INFO     | intersect: -50061195756.8337
[2025-11-27 21:58:48] 2025-11-28 02:58:15,184 | INFO     | chi2: 1.2187242181362126
[2025-11-27 21:58:48] 2025-11-28 02:58:15,184 | INFO     | current memory leak: 28.38 B/s (using 537 data points, chi2=1.22)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,185 | INFO     | could have reported an average CPU frequency of 3290 MHz (23 samples)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,185 | INFO     | ..............................
[2025-11-27 21:58:48] 2025-11-28 02:58:15,185 | INFO     | . Timing measurements:
[2025-11-27 21:58:48] 2025-11-28 02:58:15,185 | INFO     | . get job = 0 s
[2025-11-27 21:58:48] 2025-11-28 02:58:15,185 | INFO     | . initial setup = 2 s
[2025-11-27 21:58:48] 2025-11-28 02:58:15,185 | INFO     | . payload setup = 19 s
[2025-11-27 21:58:48] 2025-11-28 02:58:15,185 | INFO     | . stage-in = 0 s
[2025-11-27 21:58:48] 2025-11-28 02:58:15,185 | INFO     | . payload execution = 34643 s
[2025-11-27 21:58:48] 2025-11-28 02:58:15,186 | INFO     | . stage-out = 3 s
[2025-11-27 21:58:48] 2025-11-28 02:58:15,186 | INFO     | . log creation = 0 s
[2025-11-27 21:58:48] 2025-11-28 02:58:15,186 | INFO     | ..............................
[2025-11-27 21:58:48] 2025-11-28 02:58:15,257 | INFO     | 
[2025-11-27 21:58:48] 2025-11-28 02:58:15,257 | INFO     | job summary report
[2025-11-27 21:58:48] 2025-11-28 02:58:15,257 | INFO     | --------------------------------------------------
[2025-11-27 21:58:48] 2025-11-28 02:58:15,257 | INFO     | PanDA job id: 6898378273
[2025-11-27 21:58:48] 2025-11-28 02:58:15,257 | INFO     | task id: 47556161
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | errors: (none)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | pilot state: finished 
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | transexitcode: 0
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | exeerrorcode: 0
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | exeerrordiag: 
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | exitcode: 0
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | exitmsg: OK
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | cpuconsumptiontime: 185714 s
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | nevents: 1000
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | neventsw: 0
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | pid: 862643
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | pgrp: 862643
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | corecount: 8
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | event service: False
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | sizes: {0: 2283488, 1: 2284344, 12: 2284344, 14: 2284634, 22: 2284662, 34666: 2326540, 34671: 2335534, 34673: 2335590, 34680: 2335836}
[2025-11-27 21:58:48] 2025-11-28 02:58:15,258 | INFO     | --------------------------------------------------
[2025-11-27 21:58:48] 2025-11-28 02:58:15,259 | INFO     | 
[2025-11-27 21:58:48] 2025-11-28 02:58:15,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 21:58:48] 2025-11-28 02:58:15,278 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,278 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:58:48] 2025-11-28 02:58:15,279 | INFO     | job 6898378273 has completed (purged errors)
[2025-11-27 21:58:48] 2025-11-28 02:58:15,280 | INFO     | overall cleanup function is called
[2025-11-27 21:58:48] 2025-11-28 02:58:16,296 | INFO     | --- collectZombieJob: --- 10, [862643]
[2025-11-27 21:58:48] 2025-11-28 02:58:16,296 | INFO     | zombie collector waiting for pid 862643
[2025-11-27 21:58:48] 2025-11-28 02:58:16,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:58:48] 2025-11-28 02:58:16,296 | INFO     | collected zombie processes
[2025-11-27 21:58:48] 2025-11-28 02:58:16,296 | INFO     | will attempt to kill all subprocesses of pid=862643
[2025-11-27 21:58:48] 2025-11-28 02:58:17,056 | INFO     | process IDs to be killed: [862643] (in reverse order)
[2025-11-27 21:58:48] 2025-11-28 02:58:17,294 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:58:48] 2025-11-28 02:58:17,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:58:48] 2025-11-28 02:58:17,328 | INFO     | did not find any defunct processes belonging to 862643
[2025-11-27 21:58:48] 2025-11-28 02:58:17,358 | INFO     | did not find any defunct processes belonging to 862643
[2025-11-27 21:58:48] 2025-11-28 02:58:17,360 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:58:48] 2025-11-28 02:58:17,360 | INFO     | ready for new job
[2025-11-27 21:58:48] 2025-11-28 02:58:17,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:58:48] 2025-11-28 02:58:17,363 | INFO     | ***************************************
[2025-11-27 21:58:48] 2025-11-28 02:58:17,363 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:58:48] 2025-11-28 02:58:17,363 | INFO     | ***************************************
[2025-11-27 21:58:48] 2025-11-28 02:58:17,363 | INFO     | 
[2025-11-27 21:58:48] 2025-11-28 02:58:17,368 | INFO     | architecture information:
[2025-11-27 21:58:48] 2025-11-28 02:58:17,368 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:58:48] 2025-11-28 02:58:17,385 | INFO     | cat /etc/os-release:
[2025-11-27 21:58:48] NAME="CentOS Linux"
[2025-11-27 21:58:48] VERSION="7 (Core)"
[2025-11-27 21:58:48] ID="centos"
[2025-11-27 21:58:48] ID_LIKE="rhel fedora"
[2025-11-27 21:58:48] VERSION_ID="7"
[2025-11-27 21:58:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:58:48] ANSI_COLOR="0;31"
[2025-11-27 21:58:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:58:48] HOME_URL="https://www.centos.org/"
[2025-11-27 21:58:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:58:48] 
[2025-11-27 21:58:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:58:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:58:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:58:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:58:48] 
[2025-11-27 21:58:48] 2025-11-28 02:58:17,386 | INFO     | ***************************************
[2025-11-27 21:58:48] 2025-11-28 02:58:17,897 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 21:58:48] 2025-11-28 02:58:17,933 | INFO     | sufficient remaining disk space (67468525568 B)
[2025-11-27 21:58:48] 2025-11-28 02:58:17,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:58:48] 2025-11-28 02:58:17,933 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:58:48] 2025-11-28 02:58:17,934 | INFO     | update_server=False
[2025-11-27 21:58:48] 2025-11-28 02:58:17,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:58:48] 2025-11-28 02:58:17,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:58:48] 2025-11-28 02:58:17,934 | INFO     | aborting loop
[2025-11-27 21:58:48] 2025-11-28 02:58:18,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:58:48] 2025-11-28 02:58:18,802 | INFO     | all data control threads have been joined
[2025-11-27 21:58:48] 2025-11-28 02:58:18,941 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:18,942 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:19,068 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:19,218 | INFO     | all job control threads have been joined
[2025-11-27 21:58:48] 2025-11-28 02:58:19,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:58:48] 2025-11-28 02:58:19,320 | INFO     | all payload control threads have been joined
[2025-11-27 21:58:48] 2025-11-28 02:58:19,514 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:19,807 | INFO     | [data] control thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:19,829 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:19,881 | INFO     | [job] validate thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:20,167 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:20,187 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:20,223 | INFO     | [job] control thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:20,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:58:48] 2025-11-28 02:58:20,325 | INFO     | [payload] control thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:20,439 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:21,254 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:21,277 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:22,159 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:28,859 | INFO     | job.realtimelogging is not enabled
[2025-11-27 21:58:48] 2025-11-28 02:58:29,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:58:48] 2025-11-28 02:58:38,887 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:58:48] 2025-11-28 02:58:40,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970655926080)>', '<ExcThread(monitor, started 139970014598912)>']
[2025-11-27 21:58:48] 2025-11-28 02:58:45,810 | INFO     | all workflow threads have been joined
[2025-11-27 21:58:48] 2025-11-28 02:58:45,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:58:48] 2025-11-28 02:58:45,811 | INFO     | traces error code: 0
[2025-11-27 21:58:48] 2025-11-28 02:58:45,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:58:48] 2025-11-28 02:58:48,481 | INFO     | PID=853181 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:58:48] 2025-11-28 02:58:48,482 | INFO     | .. there are 95 such processes running
[2025-11-27 21:58:48] 2025-11-28 02:58:48,482 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:58:48] 2025-11-28 02:58:48,482 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:58:48] 2025-11-28 02:58:48,482 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:58:48] 2025-11-28 02:58:48,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:58:48] 2025-11-28 02:58:48,482 | INFO     | [monitor] control thread has ended
[2025-11-27 21:58:48] 2025-11-28 02:58:48,618 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:58:48] 2025-11-28 02:58:48,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:58:48] 2025-11-28 02:58:48,626 [wrapper] pilotpid: 853181
[2025-11-27 21:58:48] 2025-11-28 02:58:48,633 [wrapper] Pilot exit status: 0
[2025-11-27 21:58:48] 2025-11-28 02:58:48,648 [wrapper] pandaids: 6898378273
[2025-11-27 21:58:48] 2025-11-28 02:58:48,812 [wrapper] cleanup supervisor_pilot  946751 853182
[2025-11-27 21:58:48] 2025-11-28 02:58:48,816 [wrapper] Test setup, not cleaning
[2025-11-27 21:58:48] 2025-11-28 02:58:48,819 [wrapper] apfmon messages muted
[2025-11-27 21:58:48] 2025-11-28 02:58:48,823 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:58:48] 2025-11-28 02:58:48,825 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:58:48]  *** Error codes and diagnostics ***
[2025-11-27 21:58:48]     "exeErrorCode": 0,
[2025-11-27 21:58:48]     "exeErrorDiag": "",
[2025-11-27 21:58:48]     "pilotErrorCode": 0,
[2025-11-27 21:58:48]     "pilotErrorDiag": "",
[2025-11-27 21:58:48]  *** Listing of results directory ***
[2025-11-27 21:58:48] total 1322164
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:35 queuedata.json
[2025-11-27 21:58:48] -rwx------. 1 boincer umatlas     36292 Nov 26 11:35 runpilot2-wrapper.sh
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas       100 Nov 27 12:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:58:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 12:18 run_atlas
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas       105 Nov 27 12:18 job.xml
[2025-11-27 21:58:48] -rw-r--r--. 2 boincer umatlas 409225891 Nov 27 12:19 EVNT.47483658._002599.pool.root.1
[2025-11-27 21:58:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 12:19 start_atlas.sh
[2025-11-27 21:58:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 12:19 shared
[2025-11-27 21:58:48] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 12:19 input.tar.gz
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas         0 Nov 27 12:19 boinc_lockfile
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 12:19 pandaJob.out
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas        57 Nov 27 12:19 setup.sh.local
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas    991231 Nov 27 12:19 agis_schedconf.cvmfs.json
[2025-11-27 21:58:48] drwx------. 5 boincer umatlas      4096 Nov 27 12:19 pilot3
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas       533 Nov 27 21:49 boinc_task_state.xml
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 21:54 init_data.xml
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas 927831329 Nov 27 21:57 HITS.47556161._005812.pool.root.1
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas      1074 Nov 27 21:57 memory_monitor_summary.json
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas   1837658 Nov 27 21:58 log.47556161._005812.job.log.tgz.1
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas        95 Nov 27 21:58 pilot_heartbeat.json
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas      8635 Nov 27 21:58 heartbeat.json
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:58 wrapper_checkpoint.txt
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas       823 Nov 27 21:58 pilotlog.txt
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:58 boinc_mmap_file
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas   4623103 Nov 27 21:58 log.47556161._005812.job.log.1
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas       353 Nov 27 21:58 output.list
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:58 runtime_log
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas   6481920 Nov 27 21:58 result.tar.gz
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 21:58 runtime_log.err
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas       665 Nov 27 21:58 mQHKDmnfXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmP2JKDmjnXAUo.diag
[2025-11-27 21:58:48] -rw-r--r--. 1 boincer umatlas     21319 Nov 27 21:58 stderr.txt
[2025-11-27 21:58:48] HITS file was successfully produced:
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas 927831329 Nov 27 21:57 shared/HITS.pool.root.1
[2025-11-27 21:58:48]  *** Contents of shared directory: ***
[2025-11-27 21:58:48] total 1312660
[2025-11-27 21:58:48] -rw-r--r--. 2 boincer umatlas 409225891 Nov 27 12:19 ATLAS.root_0
[2025-11-27 21:58:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 12:19 start_atlas.sh
[2025-11-27 21:58:48] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 12:19 input.tar.gz
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas 927831329 Nov 27 21:57 HITS.pool.root.1
[2025-11-27 21:58:48] -rw-------. 1 boincer umatlas   6481920 Nov 27 21:58 result.tar.gz
21:59:10 (848776): run_atlas exited; CPU time 186484.737706
21:59:10 (848776): called boinc_finish(0)

</stderr_txt>
]]>

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