Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:22:56 (28214): wrapper (7.7.26015): starting
11:22:56 (28214): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 11:22:56] Arguments: --nthreads 12
[2025-11-27 11:22:56] Threads: 12
[2025-11-27 11:22:56] Checking for CVMFS
[2025-11-27 11:22:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:22:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:22:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:22:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:22:56] 2.11.2.0 2924 289310 101952 153373 2 80 20051954 20275201 1 130560 4 131984863 99.966 17427154 14118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 11:22:56] CVMFS is ok
[2025-11-27 11:22:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:22:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:22:56] Further information can be found at the LHC@home message board.
[2025-11-27 11:22:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:22:56] Checking for apptainer binary...
[2025-11-27 11:22:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:22:56] Running /usr/bin/apptainer --version
[2025-11-27 11:22:56] apptainer version 1.3.2-1.el7
[2025-11-27 11:22:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:22:57] c-205-28.aglt2.org
[2025-11-27 11:22:57] apptainer works
[2025-11-27 11:22:57] Set ATHENA_PROC_NUMBER=12
[2025-11-27 11:22:57] Set ATHENA_CORE_NUMBER=12
[2025-11-27 11:22:57] Starting ATLAS job with PandaID=6898377730
[2025-11-27 11:22:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:34:00]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:34:00] 2025-11-27 23:33:19,806 | INFO     | monitor loop #1934: job 0:6898377730 is in state 'finished'
[2025-11-27 18:34:00] 2025-11-27 23:33:19,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:34:00] 2025-11-27 23:33:20,778 | INFO     | time since job start (25808s) is within the limit (172800.0s)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,262 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 18:34:00] 2025-11-27 23:33:21,265 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2025-11-27 18:34:00] 2025-11-27 23:33:21,267 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898377730/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,267 | INFO     | extracted standard info from prmon json
[2025-11-27 18:34:00] 2025-11-27 23:33:21,267 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:34:00] 2025-11-27 23:33:21,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:34:00] 2025-11-27 23:33:21,273 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:34:00] 2025-11-27 23:33:21,274 | INFO     | sum of square deviations: 23469117247.702164
[2025-11-27 18:34:00] 2025-11-27 23:33:21,278 | INFO     | sum of deviations: 342629459977.702
[2025-11-27 18:34:00] 2025-11-27 23:33:21,278 | INFO     | mean x: 1764273492.177305
[2025-11-27 18:34:00] 2025-11-27 23:33:21,278 | INFO     | mean y: 3415343.1773049645
[2025-11-27 18:34:00] 2025-11-27 23:33:21,278 | INFO     | intersect: -25753500330.20064
[2025-11-27 18:34:00] 2025-11-27 23:33:21,279 | INFO     | chi2: 6.36465213249328
[2025-11-27 18:34:00] 2025-11-27 23:33:21,279 | INFO     | sum of square deviations: 22646696795.04306
[2025-11-27 18:34:00] 2025-11-27 23:33:21,283 | INFO     | sum of deviations: 516526714269.7795
[2025-11-27 18:34:00] 2025-11-27 23:33:21,283 | INFO     | mean x: 1764273339.679426
[2025-11-27 18:34:00] 2025-11-27 23:33:21,283 | INFO     | mean y: 3447560.9162679426
[2025-11-27 18:34:00] 2025-11-27 23:33:21,284 | INFO     | intersect: -40236165282.65965
[2025-11-27 18:34:00] 2025-11-27 23:33:21,284 | INFO     | chi2: 2.8986555259646005
[2025-11-27 18:34:00] 2025-11-27 23:33:21,284 | INFO     | current chi2=2.8986555259646005 (change=54.45696849375041 %)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,285 | INFO     | sum of square deviations: 21843718567.380142
[2025-11-27 18:34:00] 2025-11-27 23:33:21,288 | INFO     | sum of deviations: 571572371298.9587
[2025-11-27 18:34:00] 2025-11-27 23:33:21,288 | INFO     | mean x: 1764273187.181598
[2025-11-27 18:34:00] 2025-11-27 23:33:21,289 | INFO     | mean y: 3457964.547215496
[2025-11-27 18:34:00] 2025-11-27 23:33:21,289 | INFO     | intersect: -46161292149.128265
[2025-11-27 18:34:00] 2025-11-27 23:33:21,289 | INFO     | chi2: 2.277591255273564
[2025-11-27 18:34:00] 2025-11-27 23:33:21,289 | INFO     | current chi2=2.277591255273564 (change=21.42594265264968 %)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,289 | INFO     | right removable region: 412
[2025-11-27 18:34:00] 2025-11-27 23:33:21,290 | INFO     | sum of square deviations: 22646651045.043068
[2025-11-27 18:34:00] 2025-11-27 23:33:21,294 | INFO     | sum of deviations: 213861352465.1388
[2025-11-27 18:34:00] 2025-11-27 23:33:21,294 | INFO     | mean x: 1764273644.679426
[2025-11-27 18:34:00] 2025-11-27 23:33:21,294 | INFO     | mean y: 3439132.911483254
[2025-11-27 18:34:00] 2025-11-27 23:33:21,294 | INFO     | intersect: -16657300109.252441
[2025-11-27 18:34:00] 2025-11-27 23:33:21,295 | INFO     | chi2: 4.235274568207099
[2025-11-27 18:34:00] 2025-11-27 23:33:21,295 | INFO     | current chi2=4.235274568207099 (change=33.45630711559442 %)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,296 | INFO     | sum of square deviations: 21843627067.380154
[2025-11-27 18:34:00] 2025-11-27 23:33:21,299 | INFO     | sum of deviations: 184356423035.87405
[2025-11-27 18:34:00] 2025-11-27 23:33:21,299 | INFO     | mean x: 1764273797.181598
[2025-11-27 18:34:00] 2025-11-27 23:33:21,299 | INFO     | mean y: 3444729.6150121065
[2025-11-27 18:34:00] 2025-11-27 23:33:21,300 | INFO     | intersect: -14886720053.963144
[2025-11-27 18:34:00] 2025-11-27 23:33:21,300 | INFO     | chi2: 4.195634475041096
[2025-11-27 18:34:00] 2025-11-27 23:33:21,300 | INFO     | current chi2=4.195634475041096 (change=0.9359509643971687 %)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,300 | INFO     | left removable region: 20
[2025-11-27 18:34:00] 2025-11-27 23:33:21,301 | INFO     | sum of square deviations: 18678087880.405586
[2025-11-27 18:34:00] 2025-11-27 23:33:21,304 | INFO     | sum of deviations: 371843978870.6123
[2025-11-27 18:34:00] 2025-11-27 23:33:21,304 | INFO     | mean x: 1764273766.6862245
[2025-11-27 18:34:00] 2025-11-27 23:33:21,304 | INFO     | mean y: 3496533.224489796
[2025-11-27 18:34:00] 2025-11-27 23:33:21,304 | INFO     | intersect: -35119722793.196335
[2025-11-27 18:34:00] 2025-11-27 23:33:21,305 | INFO     | chi2: 0.0523396776576736
[2025-11-27 18:34:00] 2025-11-27 23:33:21,305 | INFO     | current memory leak: 19.91 B/s (using 392 data points, chi2=0.05)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,305 | INFO     | could have reported an average CPU frequency of 2381 MHz (18 samples)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | ..............................
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | . Timing measurements:
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | . get job = 0 s
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | . initial setup = 2 s
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | . payload setup = 7 s
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | . stage-in = 0 s
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | . payload execution = 25768 s
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | . stage-out = 4 s
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | . log creation = 0 s
[2025-11-27 18:34:00] 2025-11-27 23:33:21,306 | INFO     | ..............................
[2025-11-27 18:34:00] 2025-11-27 23:33:21,387 | INFO     | 
[2025-11-27 18:34:00] 2025-11-27 23:33:21,387 | INFO     | job summary report
[2025-11-27 18:34:00] 2025-11-27 23:33:21,387 | INFO     | --------------------------------------------------
[2025-11-27 18:34:00] 2025-11-27 23:33:21,387 | INFO     | PanDA job id: 6898377730
[2025-11-27 18:34:00] 2025-11-27 23:33:21,387 | INFO     | task id: 47556161
[2025-11-27 18:34:00] 2025-11-27 23:33:21,388 | INFO     | errors: (none)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,388 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:34:00] 2025-11-27 23:33:21,388 | INFO     | pilot state: finished 
[2025-11-27 18:34:00] 2025-11-27 23:33:21,388 | INFO     | transexitcode: 0
[2025-11-27 18:34:00] 2025-11-27 23:33:21,388 | INFO     | exeerrorcode: 0
[2025-11-27 18:34:00] 2025-11-27 23:33:21,388 | INFO     | exeerrordiag: 
[2025-11-27 18:34:00] 2025-11-27 23:33:21,389 | INFO     | exitcode: 0
[2025-11-27 18:34:00] 2025-11-27 23:33:21,389 | INFO     | exitmsg: OK
[2025-11-27 18:34:00] 2025-11-27 23:33:21,389 | INFO     | cpuconsumptiontime: 295612 s
[2025-11-27 18:34:00] 2025-11-27 23:33:21,389 | INFO     | nevents: 1000
[2025-11-27 18:34:00] 2025-11-27 23:33:21,389 | INFO     | neventsw: 0
[2025-11-27 18:34:00] 2025-11-27 23:33:21,389 | INFO     | pid: 6040
[2025-11-27 18:34:00] 2025-11-27 23:33:21,390 | INFO     | pgrp: 6040
[2025-11-27 18:34:00] 2025-11-27 23:33:21,390 | INFO     | corecount: 12
[2025-11-27 18:34:00] 2025-11-27 23:33:21,390 | INFO     | event service: False
[2025-11-27 18:34:00] 2025-11-27 23:33:21,390 | INFO     | sizes: {0: 2284138, 1: 2284337, 5: 2284599, 11: 2284655, 25779: 2321888, 25784: 2330882, 25786: 2331066, 25792: 2331312}
[2025-11-27 18:34:00] 2025-11-27 23:33:21,390 | INFO     | --------------------------------------------------
[2025-11-27 18:34:00] 2025-11-27 23:33:21,390 | INFO     | 
[2025-11-27 18:34:00] 2025-11-27 23:33:21,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 18:34:00] 2025-11-27 23:33:21,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:34:00] 2025-11-27 23:33:21,417 | INFO     | job 6898377730 has completed (purged errors)
[2025-11-27 18:34:00] 2025-11-27 23:33:21,417 | INFO     | overall cleanup function is called
[2025-11-27 18:34:00] 2025-11-27 23:33:22,434 | INFO     | --- collectZombieJob: --- 10, [6040]
[2025-11-27 18:34:00] 2025-11-27 23:33:22,434 | INFO     | zombie collector waiting for pid 6040
[2025-11-27 18:34:00] 2025-11-27 23:33:22,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:34:00] 2025-11-27 23:33:22,435 | INFO     | collected zombie processes
[2025-11-27 18:34:00] 2025-11-27 23:33:22,435 | INFO     | will attempt to kill all subprocesses of pid=6040
[2025-11-27 18:34:00] 2025-11-27 23:33:22,527 | INFO     | process IDs to be killed: [6040] (in reverse order)
[2025-11-27 18:34:00] 2025-11-27 23:33:22,577 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:34:00] 2025-11-27 23:33:22,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:34:00] 2025-11-27 23:33:22,581 | INFO     | did not find any defunct processes belonging to 6040
[2025-11-27 18:34:00] 2025-11-27 23:33:22,584 | INFO     | did not find any defunct processes belonging to 6040
[2025-11-27 18:34:00] 2025-11-27 23:33:22,586 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:34:00] 2025-11-27 23:33:22,586 | INFO     | ready for new job
[2025-11-27 18:34:00] 2025-11-27 23:33:22,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:34:00] 2025-11-27 23:33:22,589 | INFO     | ***************************************
[2025-11-27 18:34:00] 2025-11-27 23:33:22,589 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:34:00] 2025-11-27 23:33:22,589 | INFO     | ***************************************
[2025-11-27 18:34:00] 2025-11-27 23:33:22,589 | INFO     | 
[2025-11-27 18:34:00] 2025-11-27 23:33:22,590 | INFO     | architecture information:
[2025-11-27 18:34:00] 2025-11-27 23:33:22,590 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:34:00] 2025-11-27 23:33:22,608 | INFO     | cat /etc/os-release:
[2025-11-27 18:34:00] NAME="CentOS Linux"
[2025-11-27 18:34:00] VERSION="7 (Core)"
[2025-11-27 18:34:00] ID="centos"
[2025-11-27 18:34:00] ID_LIKE="rhel fedora"
[2025-11-27 18:34:00] VERSION_ID="7"
[2025-11-27 18:34:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:34:00] ANSI_COLOR="0;31"
[2025-11-27 18:34:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:34:00] HOME_URL="https://www.centos.org/"
[2025-11-27 18:34:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:34:00] 
[2025-11-27 18:34:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:34:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:34:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:34:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:34:00] 
[2025-11-27 18:34:00] 2025-11-27 23:33:22,608 | INFO     | ***************************************
[2025-11-27 18:34:00] 2025-11-27 23:33:23,111 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 18:34:00] 2025-11-27 23:33:23,129 | INFO     | sufficient remaining disk space (28240248832 B)
[2025-11-27 18:34:00] 2025-11-27 23:33:23,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:34:00] 2025-11-27 23:33:23,130 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:34:00] 2025-11-27 23:33:23,130 | INFO     | update_server=False
[2025-11-27 18:34:00] 2025-11-27 23:33:23,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:34:00] 2025-11-27 23:33:23,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:34:00] 2025-11-27 23:33:23,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:34:00] 2025-11-27 23:33:23,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:34:00] 2025-11-27 23:33:23,315 | INFO     | aborting loop
[2025-11-27 18:34:00] 2025-11-27 23:33:23,500 | INFO     | all data control threads have been joined
[2025-11-27 18:34:00] 2025-11-27 23:33:24,136 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:24,136 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:24,148 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:24,303 | INFO     | all payload control threads have been joined
[2025-11-27 18:34:00] 2025-11-27 23:33:24,320 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:24,366 | INFO     | all job control threads have been joined
[2025-11-27 18:34:00] 2025-11-27 23:33:24,503 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:24,506 | INFO     | [data] control thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:24,716 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:25,116 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:25,141 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:25,308 | INFO     | [payload] control thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:25,371 | INFO     | [job] control thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:25,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:34:00] 2025-11-27 23:33:25,534 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:25,581 | INFO     | [job] validate thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:25,603 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:29,423 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:33,846 | INFO     | job.realtimelogging is not enabled
[2025-11-27 18:34:00] 2025-11-27 23:33:34,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:34:00] 2025-11-27 23:33:53,977 | INFO     | PID=31940 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 18:34:00] 2025-11-27 23:33:53,977 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:34:00] 2025-11-27 23:33:53,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:34:00] 2025-11-27 23:33:53,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:34:00] 2025-11-27 23:33:54,577 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:34:00] 2025-11-27 23:33:55,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421446182720)>', '<ExcThread(monitor, started 140420717729536)>']
[2025-11-27 18:34:00] 2025-11-27 23:33:55,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:34:00] 2025-11-27 23:33:55,987 | INFO     | [monitor] control thread has ended
[2025-11-27 18:34:00] 2025-11-27 23:34:00,655 | INFO     | all workflow threads have been joined
[2025-11-27 18:34:00] 2025-11-27 23:34:00,655 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:34:00] 2025-11-27 23:34:00,655 | INFO     | traces error code: 0
[2025-11-27 18:34:00] 2025-11-27 23:34:00,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:34:00] 2025-11-27 23:34:00,741 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:34:00] 2025-11-27 23:34:00,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:34:00] 2025-11-27 23:34:00,748 [wrapper] pilotpid: 31940
[2025-11-27 18:34:00] 2025-11-27 23:34:00,752 [wrapper] Pilot exit status: 0
[2025-11-27 18:34:00] 2025-11-27 23:34:00,765 [wrapper] pandaids: 6898377730
[2025-11-27 18:34:00] 2025-11-27 23:34:00,808 [wrapper] cleanup supervisor_pilot 12478 31941
[2025-11-27 18:34:00] 2025-11-27 23:34:00,812 [wrapper] Test setup, not cleaning
[2025-11-27 18:34:00] 2025-11-27 23:34:00,816 [wrapper] apfmon messages muted
[2025-11-27 18:34:00] 2025-11-27 23:34:00,820 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:34:00] 2025-11-27 23:34:00,824 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:34:00]  *** Error codes and diagnostics ***
[2025-11-27 18:34:00]     "exeErrorCode": 0,
[2025-11-27 18:34:00]     "exeErrorDiag": "",
[2025-11-27 18:34:00]     "pilotErrorCode": 0,
[2025-11-27 18:34:00]     "pilotErrorDiag": "",
[2025-11-27 18:34:00]  *** Listing of results directory ***
[2025-11-27 18:34:00] total 1315848
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 18:34:00] -rwx------ 1 boincer umatlas     36292 Nov 26 11:26 runpilot2-wrapper.sh
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:26 queuedata.json
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas       100 Nov 27 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:34:00] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 11:22 run_atlas
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas       105 Nov 27 11:22 job.xml
[2025-11-27 18:34:00] -rw-r--r-- 2 boincer umatlas 412601825 Nov 27 11:22 EVNT.47483658._002578.pool.root.1
[2025-11-27 18:34:00] drwxrwx--x 2 boincer umatlas      4096 Nov 27 11:22 shared
[2025-11-27 18:34:00] -rw-r--r-- 2 boincer umatlas    590100 Nov 27 11:22 input.tar.gz
[2025-11-27 18:34:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 11:22 start_atlas.sh
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas         0 Nov 27 11:22 boinc_lockfile
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas      2783 Nov 27 11:22 pandaJob.out
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas        57 Nov 27 11:22 setup.sh.local
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas    991572 Nov 27 11:23 agis_schedconf.cvmfs.json
[2025-11-27 18:34:00] drwx------ 5 boincer umatlas      4096 Nov 27 11:23 pilot3
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas       533 Nov 27 18:22 boinc_task_state.xml
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 18:30 init_data.xml
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas 919321983 Nov 27 18:32 HITS.47556161._005601.pool.root.1
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas      1065 Nov 27 18:33 memory_monitor_summary.json
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas   1516240 Nov 27 18:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas   2186616 Nov 27 18:33 log.47556161._005601.job.log.tgz.1
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas        95 Nov 27 18:33 pilot_heartbeat.json
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas      8663 Nov 27 18:33 heartbeat.json
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 18:33 boinc_mmap_file
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas        29 Nov 27 18:33 wrapper_checkpoint.txt
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas      4818 Nov 27 18:34 pilotlog.txt
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas   3607520 Nov 27 18:34 log.47556161._005601.job.log.1
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas       353 Nov 27 18:34 output.list
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas       620 Nov 27 18:34 runtime_log
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas   5816320 Nov 27 18:34 result.tar.gz
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 18:34 runtime_log.err
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas       670 Nov 27 18:34 LnPKDmwWXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDma1JKDmElDtbn.diag
[2025-11-27 18:34:00] -rw-r--r-- 1 boincer umatlas     21295 Nov 27 18:34 stderr.txt
[2025-11-27 18:34:00] HITS file was successfully produced:
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas 919321983 Nov 27 18:32 shared/HITS.pool.root.1
[2025-11-27 18:34:00]  *** Contents of shared directory: ***
[2025-11-27 18:34:00] total 1306988
[2025-11-27 18:34:00] -rw-r--r-- 2 boincer umatlas 412601825 Nov 27 11:22 ATLAS.root_0
[2025-11-27 18:34:00] -rw-r--r-- 2 boincer umatlas    590100 Nov 27 11:22 input.tar.gz
[2025-11-27 18:34:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 11:22 start_atlas.sh
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas 919321983 Nov 27 18:32 HITS.pool.root.1
[2025-11-27 18:34:00] -rw------- 1 boincer umatlas   5816320 Nov 27 18:34 result.tar.gz
18:34:02 (28214): run_atlas exited; CPU time 288989.166838
18:34:02 (28214): called boinc_finish(0)

</stderr_txt>
]]>

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