Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:18 (3828961): wrapper (7.7.26015): starting
09:48:18 (3828961): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 09:48:18] Arguments: --nthreads 8
[2025-11-27 09:48:18] Threads: 8
[2025-11-27 09:48:18] Checking for CVMFS
[2025-11-27 09:48:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:48:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:48:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:48:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:48:19] 2.13.2.0 6869 38206 161824 153368 3 89 30528574 40960001 20768 16776704 0 76567770 99.775 43336834 42538 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 09:48:19] CVMFS is ok
[2025-11-27 09:48:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 09:48:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 09:48:19] Further information can be found at the LHC@home message board.
[2025-11-27 09:48:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:48:19] Checking for apptainer binary...
[2025-11-27 09:48:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:48:19] Running /usr/bin/apptainer --version
[2025-11-27 09:48:19] apptainer version 1.4.4-1.el9
[2025-11-27 09:48:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:48:19] c-212-13.aglt2.org
[2025-11-27 09:48:19] apptainer works
[2025-11-27 09:48:19] Set ATHENA_PROC_NUMBER=8
[2025-11-27 09:48:19] Set ATHENA_CORE_NUMBER=8
[2025-11-27 09:48:19] Starting ATLAS job with PandaID=6891564332
[2025-11-27 09:48:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:29:10]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:29:10] 2025-11-28 02:28:36,202 | INFO     | time since job start (42001s) is within the limit (172800.0s)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,578 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 21:29:10] 2025-11-28 02:28:37,586 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2993.1016250000007
[2025-11-27 21:29:10] 2025-11-28 02:28:37,614 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6891564332/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,618 | INFO     | extracted standard info from prmon json
[2025-11-27 21:29:10] 2025-11-28 02:28:37,618 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:29:10] 2025-11-28 02:28:37,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:29:10] 2025-11-28 02:28:37,636 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:29:10] 2025-11-28 02:28:37,637 | INFO     | sum of square deviations: 100985014093.35976
[2025-11-27 21:29:10] 2025-11-28 02:28:37,659 | INFO     | sum of deviations: 859083742087.8584
[2025-11-27 21:29:10] 2025-11-28 02:28:37,659 | INFO     | mean x: 1764275904.3444767
[2025-11-27 21:29:10] 2025-11-28 02:28:37,659 | INFO     | mean y: 2939406.409883721
[2025-11-27 21:29:10] 2025-11-28 02:28:37,659 | INFO     | intersect: -15005829563.79077
[2025-11-27 21:29:10] 2025-11-28 02:28:37,660 | INFO     | chi2: 5.425463114643971
[2025-11-27 21:29:10] 2025-11-28 02:28:37,661 | INFO     | sum of square deviations: 98799722931.22414
[2025-11-27 21:29:10] 2025-11-28 02:28:37,682 | INFO     | sum of deviations: 1096821713870.4893
[2025-11-27 21:29:10] 2025-11-28 02:28:37,682 | INFO     | mean x: 1764275751.8579795
[2025-11-27 21:29:10] 2025-11-28 02:28:37,682 | INFO     | mean y: 2956001.644216691
[2025-11-27 21:29:10] 2025-11-28 02:28:37,682 | INFO     | intersect: -19583090360.44996
[2025-11-27 21:29:10] 2025-11-28 02:28:37,683 | INFO     | chi2: 2.2479104070319726
[2025-11-27 21:29:10] 2025-11-28 02:28:37,683 | INFO     | current chi2=2.2479104070319726 (change=58.56740043141028 %)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,684 | INFO     | sum of square deviations: 96645992233.01616
[2025-11-27 21:29:10] 2025-11-28 02:28:37,706 | INFO     | sum of deviations: 1134616982876.2336
[2025-11-27 21:29:10] 2025-11-28 02:28:37,706 | INFO     | mean x: 1764275599.3643067
[2025-11-27 21:29:10] 2025-11-28 02:28:37,706 | INFO     | mean y: 2958663.687315634
[2025-11-27 21:29:10] 2025-11-28 02:28:37,706 | INFO     | intersect: -20709509709.409298
[2025-11-27 21:29:10] 2025-11-28 02:28:37,707 | INFO     | chi2: 1.9643240810131093
[2025-11-27 21:29:10] 2025-11-28 02:28:37,707 | INFO     | current chi2=1.9643240810131093 (change=12.615552876651185 %)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,707 | INFO     | right removable region: 677
[2025-11-27 21:29:10] 2025-11-28 02:28:37,708 | INFO     | sum of square deviations: 98798990567.93823
[2025-11-27 21:29:10] 2025-11-28 02:28:37,716 | INFO     | sum of deviations: 694173563959.0505
[2025-11-27 21:29:10] 2025-11-28 02:28:37,716 | INFO     | mean x: 1764276056.8565154
[2025-11-27 21:29:10] 2025-11-28 02:28:37,716 | INFO     | mean y: 2950882.786237189
[2025-11-27 21:29:10] 2025-11-28 02:28:37,717 | INFO     | intersect: -12393064412.061785
[2025-11-27 21:29:10] 2025-11-28 02:28:37,717 | INFO     | chi2: 3.5419331793217643
[2025-11-27 21:29:10] 2025-11-28 02:28:37,717 | INFO     | current chi2=3.5419331793217643 (change=34.71648217897446 %)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,718 | INFO     | sum of square deviations: 96644735201.81688
[2025-11-27 21:29:10] 2025-11-28 02:28:37,727 | INFO     | sum of deviations: 666284592001.0085
[2025-11-27 21:29:10] 2025-11-28 02:28:37,727 | INFO     | mean x: 1764276209.3687315
[2025-11-27 21:29:10] 2025-11-28 02:28:37,728 | INFO     | mean y: 2952855.707964602
[2025-11-27 21:29:10] 2025-11-28 02:28:37,728 | INFO     | intersect: -12160255537.191975
[2025-11-27 21:29:10] 2025-11-28 02:28:37,728 | INFO     | chi2: 3.5351039970088243
[2025-11-27 21:29:10] 2025-11-28 02:28:37,728 | INFO     | current chi2=3.5351039970088243 (change=0.19280946215500752 %)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,728 | INFO     | left removable region: 20
[2025-11-27 21:29:10] 2025-11-28 02:28:37,729 | INFO     | sum of square deviations: 87940334033.36966
[2025-11-27 21:29:10] 2025-11-28 02:28:37,737 | INFO     | sum of deviations: 894276261023.9685
[2025-11-27 21:29:10] 2025-11-28 02:28:37,737 | INFO     | mean x: 1764276178.8995433
[2025-11-27 21:29:10] 2025-11-28 02:28:37,737 | INFO     | mean y: 2975607.560121766
[2025-11-27 21:29:10] 2025-11-28 02:28:37,737 | INFO     | intersect: -17938169624.856754
[2025-11-27 21:29:10] 2025-11-28 02:28:37,738 | INFO     | chi2: 0.041336940098347076
[2025-11-27 21:29:10] 2025-11-28 02:28:37,738 | INFO     | current memory leak: 10.17 B/s (using 657 data points, chi2=0.04)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | could have reported an average CPU frequency of 2985 MHz (26 samples)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | ..............................
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | . Timing measurements:
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | . get job = 0 s
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | . initial setup = 2 s
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | . payload setup = 8 s
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | . stage-in = 0 s
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | . payload execution = 41958 s
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | . stage-out = 4 s
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | . log creation = 1 s
[2025-11-27 21:29:10] 2025-11-28 02:28:37,739 | INFO     | ..............................
[2025-11-27 21:29:10] 2025-11-28 02:28:37,827 | INFO     | 
[2025-11-27 21:29:10] 2025-11-28 02:28:37,827 | INFO     | job summary report
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | --------------------------------------------------
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | PanDA job id: 6891564332
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | task id: 47493068
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | errors: (none)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | pilot state: finished 
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | transexitcode: 0
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | exeerrorcode: 0
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | exeerrordiag: 
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | exitcode: 0
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | exitmsg: OK
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | cpuconsumptiontime: 209531 s
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | nevents: 1000
[2025-11-27 21:29:10] 2025-11-28 02:28:37,828 | INFO     | neventsw: 0
[2025-11-27 21:29:10] 2025-11-28 02:28:37,829 | INFO     | pid: 3840596
[2025-11-27 21:29:10] 2025-11-28 02:28:37,829 | INFO     | pgrp: 3840596
[2025-11-27 21:29:10] 2025-11-28 02:28:37,829 | INFO     | corecount: 8
[2025-11-27 21:29:10] 2025-11-28 02:28:37,829 | INFO     | event service: False
[2025-11-27 21:29:10] 2025-11-28 02:28:37,829 | INFO     | sizes: {0: 2284133, 1: 2284332, 8: 2284594, 11: 2284622, 41970: 2329687, 41974: 2338681, 41975: 2338865, 41984: 2339111}
[2025-11-27 21:29:10] 2025-11-28 02:28:37,829 | INFO     | --------------------------------------------------
[2025-11-27 21:29:10] 2025-11-28 02:28:37,829 | INFO     | 
[2025-11-27 21:29:10] 2025-11-28 02:28:37,829 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 21:29:10] 2025-11-28 02:28:37,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:29:10] 2025-11-28 02:28:37,855 | INFO     | job 6891564332 has completed (purged errors)
[2025-11-27 21:29:10] 2025-11-28 02:28:37,855 | INFO     | overall cleanup function is called
[2025-11-27 21:29:10] 2025-11-28 02:28:38,957 | INFO     | --- collectZombieJob: --- 10, [3840596]
[2025-11-27 21:29:10] 2025-11-28 02:28:38,957 | INFO     | zombie collector waiting for pid 3840596
[2025-11-27 21:29:10] 2025-11-28 02:28:38,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:29:10] 2025-11-28 02:28:38,958 | INFO     | collected zombie processes
[2025-11-27 21:29:10] 2025-11-28 02:28:38,958 | INFO     | will attempt to kill all subprocesses of pid=3840596
[2025-11-27 21:29:10] 2025-11-28 02:28:39,527 | INFO     | process IDs to be killed: [3840596] (in reverse order)
[2025-11-27 21:29:10] 2025-11-28 02:28:39,679 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:29:10] 2025-11-28 02:28:39,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:29:10] 2025-11-28 02:28:39,710 | INFO     | did not find any defunct processes belonging to 3840596
[2025-11-27 21:29:10] 2025-11-28 02:28:39,736 | INFO     | did not find any defunct processes belonging to 3840596
[2025-11-27 21:29:10] 2025-11-28 02:28:39,752 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:29:10] 2025-11-28 02:28:39,752 | INFO     | ready for new job
[2025-11-27 21:29:10] 2025-11-28 02:28:39,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:29:10] 2025-11-28 02:28:39,756 | INFO     | ***************************************
[2025-11-27 21:29:10] 2025-11-28 02:28:39,756 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:29:10] 2025-11-28 02:28:39,756 | INFO     | ***************************************
[2025-11-27 21:29:10] 2025-11-28 02:28:39,756 | INFO     | 
[2025-11-27 21:29:10] 2025-11-28 02:28:39,765 | INFO     | architecture information:
[2025-11-27 21:29:10] 2025-11-28 02:28:39,769 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:29:10] 2025-11-28 02:28:39,794 | INFO     | cat /etc/os-release:
[2025-11-27 21:29:10] NAME="CentOS Linux"
[2025-11-27 21:29:10] VERSION="7 (Core)"
[2025-11-27 21:29:10] ID="centos"
[2025-11-27 21:29:10] ID_LIKE="rhel fedora"
[2025-11-27 21:29:10] VERSION_ID="7"
[2025-11-27 21:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:29:10] ANSI_COLOR="0;31"
[2025-11-27 21:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:29:10] HOME_URL="https://www.centos.org/"
[2025-11-27 21:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:29:10] 
[2025-11-27 21:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:29:10] 
[2025-11-27 21:29:10] 2025-11-28 02:28:39,794 | INFO     | ***************************************
[2025-11-27 21:29:10] 2025-11-28 02:28:40,298 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 21:29:10] 2025-11-28 02:28:40,324 | INFO     | sufficient remaining disk space (122690732032 B)
[2025-11-27 21:29:10] 2025-11-28 02:28:40,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:29:10] 2025-11-28 02:28:40,325 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:29:10] 2025-11-28 02:28:40,325 | INFO     | update_server=False
[2025-11-27 21:29:10] 2025-11-28 02:28:40,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:29:10] 2025-11-28 02:28:40,659 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 21:29:10] 2025-11-28 02:28:40,659 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 21:29:10] 2025-11-28 02:28:40,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:29:10] 2025-11-28 02:28:40,660 | INFO     | will abort loop
[2025-11-27 21:29:10] 2025-11-28 02:28:40,919 | INFO     | all data control threads have been joined
[2025-11-27 21:29:10] 2025-11-28 02:28:41,024 | INFO     | all payload control threads have been joined
[2025-11-27 21:29:10] 2025-11-28 02:28:41,331 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:41,346 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:41,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:29:10] 2025-11-28 02:28:41,436 | INFO     | all job control threads have been joined
[2025-11-27 21:29:10] 2025-11-28 02:28:41,665 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:41,925 | INFO     | [data] control thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:41,978 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:41,979 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:41,979 | INFO     | [job] validate thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:42,030 | INFO     | [payload] control thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:42,217 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:42,296 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:42,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:42,448 | INFO     | [job] control thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:42,550 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:42,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:29:10] 2025-11-28 02:28:43,360 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:43,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:29:10] 2025-11-28 02:28:43,848 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:47,077 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:29:10] 2025-11-28 02:28:47,790 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:29:10] 2025-11-28 02:28:49,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510920791872)>', '<ExcThread(monitor, started 140510425495296)>']
[2025-11-27 21:29:10] 2025-11-28 02:28:54,757 | INFO     | all workflow threads have been joined
[2025-11-27 21:29:10] 2025-11-28 02:28:54,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:29:10] 2025-11-28 02:28:54,758 | INFO     | traces error code: 0
[2025-11-27 21:29:10] 2025-11-28 02:28:54,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:29:10] 2025-11-28 02:29:09,925 | INFO     | PID=3832865 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:29:10] 2025-11-28 02:29:09,925 | INFO     | .. there are 18 such processes running
[2025-11-27 21:29:10] 2025-11-28 02:29:09,926 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:29:10] 2025-11-28 02:29:09,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:29:10] 2025-11-28 02:29:09,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:29:10] 2025-11-28 02:29:09,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:29:10] 2025-11-28 02:29:09,926 | INFO     | [monitor] control thread has ended
[2025-11-27 21:29:10] 2025-11-28 02:29:10,078 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:29:10] 2025-11-28 02:29:10,081 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:29:10] 2025-11-28 02:29:10,083 [wrapper] pilotpid: 3832865
[2025-11-27 21:29:10] 2025-11-28 02:29:10,085 [wrapper] Pilot exit status: 0
[2025-11-27 21:29:10] 2025-11-28 02:29:10,097 [wrapper] pandaids: 6891564332
[2025-11-27 21:29:10] 2025-11-28 02:29:10,208 [wrapper] cleanup supervisor_pilot 1208138 3832866
[2025-11-27 21:29:10] 2025-11-28 02:29:10,224 [wrapper] Test setup, not cleaning
[2025-11-27 21:29:10] 2025-11-28 02:29:10,251 [wrapper] apfmon messages muted
[2025-11-27 21:29:10] 2025-11-28 02:29:10,268 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:29:10] 2025-11-28 02:29:10,291 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:29:10]  *** Error codes and diagnostics ***
[2025-11-27 21:29:10]     "exeErrorCode": 0,
[2025-11-27 21:29:10]     "exeErrorDiag": "",
[2025-11-27 21:29:10]     "pilotErrorCode": 0,
[2025-11-27 21:29:10]     "pilotErrorDiag": "",
[2025-11-27 21:29:10]  *** Listing of results directory ***
[2025-11-27 21:29:10] total 1328636
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 21:29:10] -rwx------. 1 boincer umatlas     36292 Nov 18 10:29 runpilot2-wrapper.sh
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:29 queuedata.json
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas       100 Nov 27 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:29:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 09:48 run_atlas
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas       105 Nov 27 09:48 job.xml
[2025-11-27 21:29:10] -rw-r--r--. 2 boincer umatlas 413082954 Nov 27 09:48 EVNT.47493065._000110.pool.root.1
[2025-11-27 21:29:10] -rw-r--r--. 2 boincer umatlas    590095 Nov 27 09:48 input.tar.gz
[2025-11-27 21:29:10] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 09:48 start_atlas.sh
[2025-11-27 21:29:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 09:48 shared
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas         0 Nov 27 09:48 boinc_lockfile
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 09:48 pandaJob.out
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas    991580 Nov 27 09:48 agis_schedconf.cvmfs.json
[2025-11-27 21:29:10] drwx------. 5 boincer umatlas      4096 Nov 27 09:48 pilot3
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas       532 Nov 27 21:18 boinc_task_state.xml
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 21:22 init_data.xml
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas 928513586 Nov 27 21:27 HITS.47493068._001099.pool.root.1
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas        95 Nov 27 21:28 pilot_heartbeat.json
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas      1063 Nov 27 21:28 memory_monitor_summary.json
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas   1919801 Nov 27 21:28 log.47493068._001099.job.log.tgz.1
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas      8593 Nov 27 21:28 heartbeat.json
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:29 boinc_mmap_file
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:29 wrapper_checkpoint.txt
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas       823 Nov 27 21:29 pilotlog.txt
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas   5583947 Nov 27 21:29 log.47493068._001099.job.log.1
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas       353 Nov 27 21:29 output.list
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:29 runtime_log
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas   7526400 Nov 27 21:29 result.tar.gz
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas      8704 Nov 27 21:29 runtime_log.err
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas       660 Nov 27 21:29 qaLNDmPpcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfRFKDmsYlaSm.diag
[2025-11-27 21:29:10] -rw-r--r--. 1 boincer umatlas     21318 Nov 27 21:29 stderr.txt
[2025-11-27 21:29:10] HITS file was successfully produced:
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas 928513586 Nov 27 21:27 shared/HITS.pool.root.1
[2025-11-27 21:29:10]  *** Contents of shared directory: ***
[2025-11-27 21:29:10] total 1318112
[2025-11-27 21:29:10] -rw-r--r--. 2 boincer umatlas 413082954 Nov 27 09:48 ATLAS.root_0
[2025-11-27 21:29:10] -rw-r--r--. 2 boincer umatlas    590095 Nov 27 09:48 input.tar.gz
[2025-11-27 21:29:10] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 09:48 start_atlas.sh
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas 928513586 Nov 27 21:27 HITS.pool.root.1
[2025-11-27 21:29:10] -rw-------. 1 boincer umatlas   7526400 Nov 27 21:29 result.tar.gz
21:29:12 (3828961): run_atlas exited; CPU time 209769.655382
21:29:12 (3828961): called boinc_finish(0)

</stderr_txt>
]]>

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