Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:50:41 (955): wrapper (7.7.26015): starting
09:50:41 (955): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 09:50:41] Arguments: --nthreads 12
[2025-11-27 09:50:41] Threads: 12
[2025-11-27 09:50:41] Checking for CVMFS
[2025-11-27 09:50:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:50:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:50:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:50:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:50:41] 2.11.2.0 2947 289218 92520 153368 2 81 19051664 20275200 1 130560 1 130318370 99.971 16502432 12833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 09:50:41] CVMFS is ok
[2025-11-27 09:50:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 09:50:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 09:50:41] Further information can be found at the LHC@home message board.
[2025-11-27 09:50:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:50:41] Checking for apptainer binary...
[2025-11-27 09:50:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:50:41] Running /usr/bin/apptainer --version
[2025-11-27 09:50:41] apptainer version 1.3.2-1.el7
[2025-11-27 09:50:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:50:43] c-205-18.aglt2.org
[2025-11-27 09:50:43] apptainer works
[2025-11-27 09:50:43] Set ATHENA_PROC_NUMBER=12
[2025-11-27 09:50:43] Set ATHENA_CORE_NUMBER=12
[2025-11-27 09:50:43] Starting ATLAS job with PandaID=6898377763
[2025-11-27 09:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:56:01]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:56:01] 2025-11-27 21:55:27,091 | INFO     | PID=4822 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 16:56:01] 2025-11-27 21:55:27,361 | INFO     | monitor loop #1910: job 0:6898377763 is in state 'finished'
[2025-11-27 16:56:01] 2025-11-27 21:55:27,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,091 | INFO     | time since job start (25470s) is within the limit (172800.0s)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,768 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 16:56:01] 2025-11-27 21:55:28,772 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.1666666666667
[2025-11-27 16:56:01] 2025-11-27 21:55:28,774 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898377763/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,775 | INFO     | extracted standard info from prmon json
[2025-11-27 16:56:01] 2025-11-27 21:55:28,775 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:56:01] 2025-11-27 21:55:28,775 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:56:01] 2025-11-27 21:55:28,783 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:56:01] 2025-11-27 21:55:28,784 | INFO     | sum of square deviations: 22484659481.07891
[2025-11-27 16:56:01] 2025-11-27 21:55:28,787 | INFO     | sum of deviations: 396903778227.87054
[2025-11-27 16:56:01] 2025-11-27 21:55:28,787 | INFO     | mean x: 1764267776.201439
[2025-11-27 16:56:01] 2025-11-27 21:55:28,788 | INFO     | mean y: 3414672.215827338
[2025-11-27 16:56:01] 2025-11-27 21:55:28,788 | INFO     | intersect: -31139798627.024826
[2025-11-27 16:56:01] 2025-11-27 21:55:28,788 | INFO     | chi2: 5.848098227089079
[2025-11-27 16:56:01] 2025-11-27 21:55:28,789 | INFO     | sum of square deviations: 21685544535.873722
[2025-11-27 16:56:01] 2025-11-27 21:55:28,792 | INFO     | sum of deviations: 543863924872.4708
[2025-11-27 16:56:01] 2025-11-27 21:55:28,793 | INFO     | mean x: 1764267623.7038834
[2025-11-27 16:56:01] 2025-11-27 21:55:28,793 | INFO     | mean y: 3442687.6432038834
[2025-11-27 16:56:01] 2025-11-27 21:55:28,793 | INFO     | intersect: -44243613814.24518
[2025-11-27 16:56:01] 2025-11-27 21:55:28,793 | INFO     | chi2: 3.219397698991621
[2025-11-27 16:56:01] 2025-11-27 21:55:28,793 | INFO     | current chi2=3.219397698991621 (change=44.94966442117897 %)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,794 | INFO     | sum of square deviations: 20905592740.663395
[2025-11-27 16:56:01] 2025-11-27 21:55:28,798 | INFO     | sum of deviations: 580277593149.1943
[2025-11-27 16:56:01] 2025-11-27 21:55:28,798 | INFO     | mean x: 1764267471.2063882
[2025-11-27 16:56:01] 2025-11-27 21:55:28,798 | INFO     | mean y: 3449757.7714987714
[2025-11-27 16:56:01] 2025-11-27 21:55:28,798 | INFO     | intersect: -48967411511.889465
[2025-11-27 16:56:01] 2025-11-27 21:55:28,798 | INFO     | chi2: 2.819444559897389
[2025-11-27 16:56:01] 2025-11-27 21:55:28,799 | INFO     | current chi2=2.819444559897389 (change=12.423228705776392 %)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,799 | INFO     | right removable region: 406
[2025-11-27 16:56:01] 2025-11-27 21:55:28,799 | INFO     | sum of square deviations: 21685493295.873737
[2025-11-27 16:56:01] 2025-11-27 21:55:28,803 | INFO     | sum of deviations: 247646174026.12573
[2025-11-27 16:56:01] 2025-11-27 21:55:28,803 | INFO     | mean x: 1764267928.7038834
[2025-11-27 16:56:01] 2025-11-27 21:55:28,803 | INFO     | mean y: 3443084.796116505
[2025-11-27 16:56:01] 2025-11-27 21:55:28,803 | INFO     | intersect: -20144320977.534405
[2025-11-27 16:56:01] 2025-11-27 21:55:28,804 | INFO     | chi2: 3.1979734141860954
[2025-11-27 16:56:01] 2025-11-27 21:55:28,804 | INFO     | current chi2=3.1979734141860954 (change=45.316010607128554 %)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,804 | INFO     | sum of square deviations: 20905515392.073784
[2025-11-27 16:56:01] 2025-11-27 21:55:28,808 | INFO     | sum of deviations: 216990458460.17422
[2025-11-27 16:56:01] 2025-11-27 21:55:28,808 | INFO     | mean x: 1764268081.203931
[2025-11-27 16:56:01] 2025-11-27 21:55:28,808 | INFO     | mean y: 3449071.515970516
[2025-11-27 16:56:01] 2025-11-27 21:55:28,808 | INFO     | intersect: -18308911691.052963
[2025-11-27 16:56:01] 2025-11-27 21:55:28,809 | INFO     | chi2: 3.152302266059843
[2025-11-27 16:56:01] 2025-11-27 21:55:28,809 | INFO     | current chi2=3.152302266059843 (change=1.4281278238166895 %)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,809 | INFO     | left removable region: 20
[2025-11-27 16:56:01] 2025-11-27 21:55:28,810 | INFO     | sum of square deviations: 17833702185.91974
[2025-11-27 16:56:01] 2025-11-27 21:55:28,813 | INFO     | sum of deviations: 350792720100.8627
[2025-11-27 16:56:01] 2025-11-27 21:55:28,813 | INFO     | mean x: 1764268050.707254
[2025-11-27 16:56:01] 2025-11-27 21:55:28,813 | INFO     | mean y: 3495615.3704663212
[2025-11-27 16:56:01] 2025-11-27 21:55:28,813 | INFO     | intersect: -34700032684.17011
[2025-11-27 16:56:01] 2025-11-27 21:55:28,814 | INFO     | chi2: 0.05794644882039299
[2025-11-27 16:56:01] 2025-11-27 21:55:28,814 | INFO     | current memory leak: 19.67 B/s (using 386 data points, chi2=0.06)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,814 | INFO     | could have reported an average CPU frequency of 2326 MHz (18 samples)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,815 | INFO     | ..............................
[2025-11-27 16:56:01] 2025-11-27 21:55:28,815 | INFO     | . Timing measurements:
[2025-11-27 16:56:01] 2025-11-27 21:55:28,815 | INFO     | . get job = 0 s
[2025-11-27 16:56:01] 2025-11-27 21:55:28,815 | INFO     | . initial setup = 2 s
[2025-11-27 16:56:01] 2025-11-27 21:55:28,815 | INFO     | . payload setup = 7 s
[2025-11-27 16:56:01] 2025-11-27 21:55:28,815 | INFO     | . stage-in = 0 s
[2025-11-27 16:56:01] 2025-11-27 21:55:28,815 | INFO     | . payload execution = 25431 s
[2025-11-27 16:56:01] 2025-11-27 21:55:28,815 | INFO     | . stage-out = 3 s
[2025-11-27 16:56:01] 2025-11-27 21:55:28,816 | INFO     | . log creation = 0 s
[2025-11-27 16:56:01] 2025-11-27 21:55:28,816 | INFO     | ..............................
[2025-11-27 16:56:01] 2025-11-27 21:55:28,897 | INFO     | 
[2025-11-27 16:56:01] 2025-11-27 21:55:28,897 | INFO     | job summary report
[2025-11-27 16:56:01] 2025-11-27 21:55:28,898 | INFO     | --------------------------------------------------
[2025-11-27 16:56:01] 2025-11-27 21:55:28,898 | INFO     | PanDA job id: 6898377763
[2025-11-27 16:56:01] 2025-11-27 21:55:28,898 | INFO     | task id: 47556161
[2025-11-27 16:56:01] 2025-11-27 21:55:28,898 | INFO     | errors: (none)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:56:01] 2025-11-27 21:55:28,898 | INFO     | pilot state: finished 
[2025-11-27 16:56:01] 2025-11-27 21:55:28,899 | INFO     | transexitcode: 0
[2025-11-27 16:56:01] 2025-11-27 21:55:28,899 | INFO     | exeerrorcode: 0
[2025-11-27 16:56:01] 2025-11-27 21:55:28,899 | INFO     | exeerrordiag: 
[2025-11-27 16:56:01] 2025-11-27 21:55:28,899 | INFO     | exitcode: 0
[2025-11-27 16:56:01] 2025-11-27 21:55:28,899 | INFO     | exitmsg: OK
[2025-11-27 16:56:01] 2025-11-27 21:55:28,899 | INFO     | cpuconsumptiontime: 291549 s
[2025-11-27 16:56:01] 2025-11-27 21:55:28,899 | INFO     | nevents: 1000
[2025-11-27 16:56:01] 2025-11-27 21:55:28,899 | INFO     | neventsw: 0
[2025-11-27 16:56:01] 2025-11-27 21:55:28,900 | INFO     | pid: 11249
[2025-11-27 16:56:01] 2025-11-27 21:55:28,900 | INFO     | pgrp: 11249
[2025-11-27 16:56:01] 2025-11-27 21:55:28,900 | INFO     | corecount: 12
[2025-11-27 16:56:01] 2025-11-27 21:55:28,900 | INFO     | event service: False
[2025-11-27 16:56:01] 2025-11-27 21:55:28,900 | INFO     | sizes: {0: 2284309, 5: 2284571, 11: 2284627, 25443: 2321749, 25447: 2330799, 25454: 2330989}
[2025-11-27 16:56:01] 2025-11-27 21:55:28,900 | INFO     | --------------------------------------------------
[2025-11-27 16:56:01] 2025-11-27 21:55:28,900 | INFO     | 
[2025-11-27 16:56:01] 2025-11-27 21:55:28,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 16:56:01] 2025-11-27 21:55:28,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:56:01] 2025-11-27 21:55:28,927 | INFO     | job 6898377763 has completed (purged errors)
[2025-11-27 16:56:01] 2025-11-27 21:55:28,927 | INFO     | overall cleanup function is called
[2025-11-27 16:56:01] 2025-11-27 21:55:29,944 | INFO     | --- collectZombieJob: --- 10, [11249]
[2025-11-27 16:56:01] 2025-11-27 21:55:29,953 | INFO     | zombie collector waiting for pid 11249
[2025-11-27 16:56:01] 2025-11-27 21:55:29,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:56:01] 2025-11-27 21:55:29,953 | INFO     | collected zombie processes
[2025-11-27 16:56:01] 2025-11-27 21:55:29,953 | INFO     | will attempt to kill all subprocesses of pid=11249
[2025-11-27 16:56:01] 2025-11-27 21:55:30,045 | INFO     | process IDs to be killed: [11249] (in reverse order)
[2025-11-27 16:56:01] 2025-11-27 21:55:30,100 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:56:01] 2025-11-27 21:55:30,100 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:56:01] 2025-11-27 21:55:30,102 | INFO     | did not find any defunct processes belonging to 11249
[2025-11-27 16:56:01] 2025-11-27 21:55:30,104 | INFO     | did not find any defunct processes belonging to 11249
[2025-11-27 16:56:01] 2025-11-27 21:55:30,106 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:56:01] 2025-11-27 21:55:30,107 | INFO     | ready for new job
[2025-11-27 16:56:01] 2025-11-27 21:55:30,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:56:01] 2025-11-27 21:55:30,109 | INFO     | ***************************************
[2025-11-27 16:56:01] 2025-11-27 21:55:30,109 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:56:01] 2025-11-27 21:55:30,109 | INFO     | ***************************************
[2025-11-27 16:56:01] 2025-11-27 21:55:30,109 | INFO     | 
[2025-11-27 16:56:01] 2025-11-27 21:55:30,110 | INFO     | architecture information:
[2025-11-27 16:56:01] 2025-11-27 21:55:30,110 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:56:01] 2025-11-27 21:55:30,124 | INFO     | cat /etc/os-release:
[2025-11-27 16:56:01] NAME="CentOS Linux"
[2025-11-27 16:56:01] VERSION="7 (Core)"
[2025-11-27 16:56:01] ID="centos"
[2025-11-27 16:56:01] ID_LIKE="rhel fedora"
[2025-11-27 16:56:01] VERSION_ID="7"
[2025-11-27 16:56:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:56:01] ANSI_COLOR="0;31"
[2025-11-27 16:56:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:56:01] HOME_URL="https://www.centos.org/"
[2025-11-27 16:56:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:56:01] 
[2025-11-27 16:56:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:56:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:56:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:56:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:56:01] 
[2025-11-27 16:56:01] 2025-11-27 21:55:30,125 | INFO     | ***************************************
[2025-11-27 16:56:01] 2025-11-27 21:55:30,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 16:56:01] 2025-11-27 21:55:30,643 | INFO     | sufficient remaining disk space (28248637440 B)
[2025-11-27 16:56:01] 2025-11-27 21:55:30,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:56:01] 2025-11-27 21:55:30,644 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:56:01] 2025-11-27 21:55:30,644 | INFO     | update_server=False
[2025-11-27 16:56:01] 2025-11-27 21:55:30,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:56:01] 2025-11-27 21:55:30,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:56:01] 2025-11-27 21:55:30,824 | INFO     | all data control threads have been joined
[2025-11-27 16:56:01] 2025-11-27 21:55:30,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:56:01] 2025-11-27 21:55:30,870 | INFO     | aborting loop
[2025-11-27 16:56:01] 2025-11-27 21:55:31,648 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:31,650 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:31,766 | INFO     | all payload control threads have been joined
[2025-11-27 16:56:01] 2025-11-27 21:55:31,829 | INFO     | [data] control thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:31,862 | INFO     | all job control threads have been joined
[2025-11-27 16:56:01] 2025-11-27 21:55:31,875 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:31,945 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:31,948 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:31,998 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:32,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:56:01] 2025-11-27 21:55:32,211 | INFO     | [job] validate thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:32,211 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:32,488 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:32,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:56:01] 2025-11-27 21:55:32,771 | INFO     | [payload] control thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:32,867 | INFO     | [job] control thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:32,869 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:33,020 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:34,010 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:36,693 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:56:01] 2025-11-27 21:55:39,533 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:56:01] 2025-11-27 21:55:40,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894493177664)>', '<ExcThread(monitor, started 139893913147136)>']
[2025-11-27 16:56:01] 2025-11-27 21:55:45,614 | INFO     | all workflow threads have been joined
[2025-11-27 16:56:01] 2025-11-27 21:55:45,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:56:01] 2025-11-27 21:55:45,614 | INFO     | traces error code: 0
[2025-11-27 16:56:01] 2025-11-27 21:55:45,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:56:01] 2025-11-27 21:56:01,297 | INFO     | PID=4822 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 16:56:01] 2025-11-27 21:56:01,298 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:56:01] 2025-11-27 21:56:01,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:56:01] 2025-11-27 21:56:01,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:56:01] 2025-11-27 21:56:01,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:56:01] 2025-11-27 21:56:01,299 | INFO     | [monitor] control thread has ended
[2025-11-27 16:56:01] 2025-11-27 21:56:01,390 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:56:01] 2025-11-27 21:56:01,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:56:01] 2025-11-27 21:56:01,399 [wrapper] pilotpid: 4822
[2025-11-27 16:56:01] 2025-11-27 21:56:01,403 [wrapper] Pilot exit status: 0
[2025-11-27 16:56:01] 2025-11-27 21:56:01,418 [wrapper] pandaids: 6898377763
[2025-11-27 16:56:01] 2025-11-27 21:56:01,461 [wrapper] cleanup supervisor_pilot 16481 4823
[2025-11-27 16:56:01] 2025-11-27 21:56:01,464 [wrapper] Test setup, not cleaning
[2025-11-27 16:56:01] 2025-11-27 21:56:01,469 [wrapper] apfmon messages muted
[2025-11-27 16:56:01] 2025-11-27 21:56:01,473 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:56:01] 2025-11-27 21:56:01,476 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:56:01]  *** Error codes and diagnostics ***
[2025-11-27 16:56:01]     "exeErrorCode": 0,
[2025-11-27 16:56:01]     "exeErrorDiag": "",
[2025-11-27 16:56:01]     "pilotErrorCode": 0,
[2025-11-27 16:56:01]     "pilotErrorDiag": "",
[2025-11-27 16:56:01]  *** Listing of results directory ***
[2025-11-27 16:56:01] total 1310224
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 16:56:01] -rwx------ 1 boincer umatlas     36292 Nov 26 11:32 runpilot2-wrapper.sh
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:32 queuedata.json
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas       100 Nov 27 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:56:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 09:50 run_atlas
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas       105 Nov 27 09:50 job.xml
[2025-11-27 16:56:01] -rw-r--r-- 2 boincer umatlas 409689291 Nov 27 09:50 EVNT.47483658._002580.pool.root.1
[2025-11-27 16:56:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 09:50 start_atlas.sh
[2025-11-27 16:56:01] drwxrwx--x 2 boincer umatlas      4096 Nov 27 09:50 shared
[2025-11-27 16:56:01] -rw-r--r-- 2 boincer umatlas    590103 Nov 27 09:50 input.tar.gz
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas         0 Nov 27 09:50 boinc_lockfile
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas      2783 Nov 27 09:50 pandaJob.out
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas        57 Nov 27 09:50 setup.sh.local
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas    991580 Nov 27 09:50 agis_schedconf.cvmfs.json
[2025-11-27 16:56:01] drwx------ 5 boincer umatlas      4096 Nov 27 09:50 pilot3
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas       532 Nov 27 16:45 boinc_task_state.xml
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas      5955 Nov 27 16:46 init_data.xml
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas 916594106 Nov 27 16:54 HITS.47556161._005621.pool.root.1
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas      1064 Nov 27 16:55 memory_monitor_summary.json
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas   1516240 Nov 27 16:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas   2171319 Nov 27 16:55 log.47556161._005621.job.log.tgz.1
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas      8658 Nov 27 16:55 heartbeat.json
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas        29 Nov 27 16:55 wrapper_checkpoint.txt
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 16:55 boinc_mmap_file
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas        95 Nov 27 16:56 pilot_heartbeat.json
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas       744 Nov 27 16:56 pilotlog.txt
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas   3565332 Nov 27 16:56 log.47556161._005621.job.log.1
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas       353 Nov 27 16:56 output.list
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas       620 Nov 27 16:56 runtime_log
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas   5754880 Nov 27 16:56 result.tar.gz
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 16:56 runtime_log.err
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas       670 Nov 27 16:56 2kSNDmpcXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE2JKDmd6bYBo.diag
[2025-11-27 16:56:01] -rw-r--r-- 1 boincer umatlas     21405 Nov 27 16:56 stderr.txt
[2025-11-27 16:56:01] HITS file was successfully produced:
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas 916594106 Nov 27 16:54 shared/HITS.pool.root.1
[2025-11-27 16:56:01]  *** Contents of shared directory: ***
[2025-11-27 16:56:01] total 1301420
[2025-11-27 16:56:01] -rw-r--r-- 2 boincer umatlas 409689291 Nov 27 09:50 ATLAS.root_0
[2025-11-27 16:56:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 09:50 start_atlas.sh
[2025-11-27 16:56:01] -rw-r--r-- 2 boincer umatlas    590103 Nov 27 09:50 input.tar.gz
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas 916594106 Nov 27 16:54 HITS.pool.root.1
[2025-11-27 16:56:01] -rw------- 1 boincer umatlas   5754880 Nov 27 16:56 result.tar.gz
16:56:02 (955): run_atlas exited; CPU time 284847.719361
16:56:02 (955): called boinc_finish(0)

</stderr_txt>
]]>

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