Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:52:00 (4146834): wrapper (7.7.26015): starting
15:52:00 (4146834): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 15:52:00] Arguments: --nthreads 3
[2025-11-27 15:52:00] Threads: 3
[2025-11-27 15:52:00] Checking for CVMFS
[2025-11-27 15:52:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 15:52:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 15:52:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 15:52:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 15:52:00] 2.9.2.0 3252557 433 69716 153368 1 129 36025421 36864001 0 130560 0 2666568 99.999 18591 11803 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 15:52:00] CVMFS is ok
[2025-11-27 15:52:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 15:52:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 15:52:00] Further information can be found at the LHC@home message board.
[2025-11-27 15:52:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 15:52:00] Checking for apptainer binary...
[2025-11-27 15:52:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 15:52:00] Running /usr/bin/apptainer --version
[2025-11-27 15:52:00] apptainer version 1.4.1-1.1
[2025-11-27 15:52:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 15:52:00] thA335
[2025-11-27 15:52:00] apptainer works
[2025-11-27 15:52:00] Set ATHENA_PROC_NUMBER=3
[2025-11-27 15:52:00] Set ATHENA_CORE_NUMBER=3
[2025-11-27 15:52:00] Starting ATLAS job with PandaID=6898377125
[2025-11-27 15:52:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:56:18]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:56:18] 2025-11-27 14:55:26,378 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 15:56:18] 2025-11-27 14:55:26,391 | INFO     | sufficient remaining disk space (825976946688 B)
[2025-11-27 15:56:18] 2025-11-27 14:55:26,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:56:18] 2025-11-27 14:55:26,392 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:56:18] 2025-11-27 14:55:26,392 | INFO     | update_server=False
[2025-11-27 15:56:18] 2025-11-27 14:55:26,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:56:18] 2025-11-27 14:55:26,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:56:18] 2025-11-27 14:55:26,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:56:18] 2025-11-27 14:55:26,392 | INFO     | aborting loop
[2025-11-27 15:56:18] 2025-11-27 14:55:26,421 | INFO     | all job control threads have been joined
[2025-11-27 15:56:18] 2025-11-27 14:55:27,279 | INFO     | all data control threads have been joined
[2025-11-27 15:56:18] 2025-11-27 14:55:27,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:56:18] 2025-11-27 14:55:27,397 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:27,398 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:27,398 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:27,427 | INFO     | [job] control thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:27,517 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:27,584 | INFO     | all payload control threads have been joined
[2025-11-27 15:56:18] 2025-11-27 14:55:27,692 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:28,208 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:28,285 | INFO     | [data] control thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:28,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:28,564 | INFO     | [job] validate thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:28,590 | INFO     | [payload] control thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:28,644 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:28,696 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:28,816 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:29,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:56:18] 2025-11-27 14:55:29,401 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:33,382 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:56:18] 2025-11-27 14:55:56,702 | INFO     | PID=4150561 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:56:18] 2025-11-27 14:55:56,702 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:56:18] 2025-11-27 14:55:56,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:56:18] 2025-11-27 14:55:56,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:56:18] 2025-11-27 14:56:11,858 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:56:18] 2025-11-27 14:56:13,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924666337088)>', '<ExcThread(monitor, started 139924154066688)>']
[2025-11-27 15:56:18] 2025-11-27 14:56:13,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:56:18] 2025-11-27 14:56:13,787 | INFO     | [monitor] control thread has ended
[2025-11-27 15:56:18] 2025-11-27 14:56:18,083 | INFO     | all workflow threads have been joined
[2025-11-27 15:56:18] 2025-11-27 14:56:18,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:56:18] 2025-11-27 14:56:18,084 | INFO     | traces error code: 0
[2025-11-27 15:56:18] 2025-11-27 14:56:18,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:56:18] 2025-11-27 14:56:18,132 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:56:18] 2025-11-27 14:56:18,135 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:56:18] 2025-11-27 14:56:18,138 [wrapper] pilotpid: 4150561
[2025-11-27 15:56:18] 2025-11-27 14:56:18,141 [wrapper] Pilot exit status: 0
[2025-11-27 15:56:18] 2025-11-27 14:56:18,148 [wrapper] pandaids: 6898377125
[2025-11-27 15:56:18] 2025-11-27 14:56:18,164 [wrapper] cleanup supervisor_pilot 4150567 4150562
[2025-11-27 15:56:18] 2025-11-27 14:56:18,167 [wrapper] Test setup, not cleaning
[2025-11-27 15:56:18] 2025-11-27 14:56:18,169 [wrapper] apfmon messages muted
[2025-11-27 15:56:18] 2025-11-27 14:56:18,172 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:56:18] 2025-11-27 14:56:18,175 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:56:18]  *** Error codes and diagnostics ***
[2025-11-27 15:56:18]     "exeErrorCode": 65,
[2025-11-27 15:56:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 15:56:18]     "pilotErrorCode": 1305,
[2025-11-27 15:56:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 15:56:18]  *** Listing of results directory ***
[2025-11-27 15:56:18] total 407568
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc    576529 Nov 26 17:12 pilot3.tar.gz
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc      5112 Nov 26 17:18 queuedata.json
[2025-11-27 15:56:18] -rwx------ 1 boinc boinc     36292 Nov 26 17:19 runpilot2-wrapper.sh
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc       100 Nov 27 15:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:56:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 15:51 run_atlas
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc       105 Nov 27 15:51 job.xml
[2025-11-27 15:56:18] -rw-r--r-- 2 boinc boinc 413162546 Nov 27 15:52 EVNT.47483658._002571.pool.root.1
[2025-11-27 15:56:18] -rw-r--r-- 2 boinc boinc    590107 Nov 27 15:52 input.tar.gz
[2025-11-27 15:56:18] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:52 start_atlas.sh
[2025-11-27 15:56:18] drwxrwx--x 2 boinc boinc      4096 Nov 27 15:52 shared
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:52 boinc_setup_complete
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc      6196 Nov 27 15:52 init_data.xml
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:52 boinc_lockfile
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc      2786 Nov 27 15:52 pandaJob.out
[2025-11-27 15:56:18] -rw------- 1 boinc boinc    991580 Nov 27 15:52 agis_schedconf.cvmfs.json
[2025-11-27 15:56:18] -rw------- 1 boinc boinc   1516240 Nov 27 15:52 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:56:18] drwx------ 5 boinc boinc      4096 Nov 27 15:52 pilot3
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc       522 Nov 27 15:53 boinc_task_state.xml
[2025-11-27 15:56:18] -rw------- 1 boinc boinc       958 Nov 27 15:53 memory_monitor_summary.json
[2025-11-27 15:56:18] -rw------- 1 boinc boinc     55607 Nov 27 15:53 log.47556161._005540.job.log.tgz.1
[2025-11-27 15:56:18] -rw------- 1 boinc boinc        95 Nov 27 15:55 pilot_heartbeat.json
[2025-11-27 15:56:18] -rw------- 1 boinc boinc      8413 Nov 27 15:55 heartbeat.json
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc      8192 Nov 27 15:55 boinc_mmap_file
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc        22 Nov 27 15:55 wrapper_checkpoint.txt
[2025-11-27 15:56:18] -rw------- 1 boinc boinc      4752 Nov 27 15:56 pilotlog.txt
[2025-11-27 15:56:18] -rw------- 1 boinc boinc     93502 Nov 27 15:56 log.47556161._005540.job.log.1
[2025-11-27 15:56:18] -rw------- 1 boinc boinc       186 Nov 27 15:56 output.list
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc       620 Nov 27 15:56 runtime_log
[2025-11-27 15:56:18] -rw------- 1 boinc boinc    163840 Nov 27 15:56 result.tar.gz
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc      8744 Nov 27 15:56 runtime_log.err
[2025-11-27 15:56:18] -rw------- 1 boinc boinc       649 Nov 27 15:56 cupLDmuPXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmg8MKDm0hVBen.diag
[2025-11-27 15:56:18] -rw-r--r-- 1 boinc boinc      8239 Nov 27 15:56 stderr.txt
[2025-11-27 15:56:18] No HITS result produced
[2025-11-27 15:56:18]  *** Contents of shared directory: ***
[2025-11-27 15:56:18] total 404240
[2025-11-27 15:56:18] -rw-r--r-- 2 boinc boinc 413162546 Nov 27 15:52 ATLAS.root_0
[2025-11-27 15:56:18] -rw-r--r-- 2 boinc boinc    590107 Nov 27 15:52 input.tar.gz
[2025-11-27 15:56:18] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:52 start_atlas.sh
[2025-11-27 15:56:18] -rw------- 1 boinc boinc    163840 Nov 27 15:56 result.tar.gz
15:56:19 (4146834): run_atlas exited; CPU time 31.537505
15:56:19 (4146834): called boinc_finish(0)

</stderr_txt>
]]>

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