Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:11:00 (397400): wrapper (7.7.26015): starting
09:11:00 (397400): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 09:11:00] Arguments: --nthreads 8
[2025-11-27 09:11:00] Threads: 8
[2025-11-27 09:11:00] Checking for CVMFS
[2025-11-27 09:11:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:11:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:11:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:11:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:11:01] 2.13.3.0 9582 31570 260288 153366 0 928 20512691 40960000 66588 16776704 0 405909871 99.725 281056449 48508 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 09:11:01] CVMFS is ok
[2025-11-27 09:11:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 09:11:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 09:11:01] Further information can be found at the LHC@home message board.
[2025-11-27 09:11:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:11:01] Checking for apptainer binary...
[2025-11-27 09:11:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:11:01] Running /usr/bin/apptainer --version
[2025-11-27 09:11:01] apptainer version 1.4.4-1.el9
[2025-11-27 09:11:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:11:02] c8-7-4.aglt2.org
[2025-11-27 09:11:02] apptainer works
[2025-11-27 09:11:02] Set ATHENA_PROC_NUMBER=8
[2025-11-27 09:11:02] Set ATHENA_CORE_NUMBER=8
[2025-11-27 09:11:02] Starting ATLAS job with PandaID=6891579381
[2025-11-27 09:11:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:14:38]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:14:38] 2025-11-27 22:13:31,406 | INFO     | chi2: 13.694675780878805
[2025-11-27 17:14:38] 2025-11-27 22:13:31,406 | INFO     | sum of square deviations: 31581506795.164795
[2025-11-27 17:14:38] 2025-11-27 22:13:31,413 | INFO     | sum of deviations: 526758807030.0384
[2025-11-27 17:14:38] 2025-11-27 22:13:31,413 | INFO     | mean x: 1764267003.7430408
[2025-11-27 17:14:38] 2025-11-27 22:13:31,413 | INFO     | mean y: 2854791.550321199
[2025-11-27 17:14:38] 2025-11-27 22:13:31,413 | INFO     | intersect: -29423960977.620934
[2025-11-27 17:14:38] 2025-11-27 22:13:31,414 | INFO     | chi2: 9.966673536627237
[2025-11-27 17:14:38] 2025-11-27 22:13:31,414 | INFO     | current chi2=9.966673536627237 (change=27.222274582482576 %)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,414 | INFO     | sum of square deviations: 30578135320.34857
[2025-11-27 17:14:38] 2025-11-27 22:13:31,422 | INFO     | sum of deviations: 664131548745.0599
[2025-11-27 17:14:38] 2025-11-27 22:13:31,422 | INFO     | mean x: 1764266851.2575758
[2025-11-27 17:14:38] 2025-11-27 22:13:31,422 | INFO     | mean y: 2875626.4112554113
[2025-11-27 17:14:38] 2025-11-27 22:13:31,422 | INFO     | intersect: -38315526200.5811
[2025-11-27 17:14:38] 2025-11-27 22:13:31,422 | INFO     | chi2: 7.284097299211372
[2025-11-27 17:14:38] 2025-11-27 22:13:31,423 | INFO     | current chi2=7.284097299211372 (change=26.915462090310022 %)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,423 | INFO     | sum of square deviations: 29596167839.94742
[2025-11-27 17:14:38] 2025-11-27 22:13:31,429 | INFO     | sum of deviations: 660911534012.9694
[2025-11-27 17:14:38] 2025-11-27 22:13:31,429 | INFO     | mean x: 1764266698.7658644
[2025-11-27 17:14:38] 2025-11-27 22:13:31,429 | INFO     | mean y: 2875117.2800875274
[2025-11-27 17:14:38] 2025-11-27 22:13:31,429 | INFO     | intersect: -39394935322.06686
[2025-11-27 17:14:38] 2025-11-27 22:13:31,429 | INFO     | chi2: 7.258462404386047
[2025-11-27 17:14:38] 2025-11-27 22:13:31,429 | INFO     | current chi2=7.258462404386047 (change=0.35192960462102174 %)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,429 | INFO     | right removable region: 456
[2025-11-27 17:14:38] 2025-11-27 22:13:31,431 | INFO     | sum of square deviations: 31581010255.164837
[2025-11-27 17:14:38] 2025-11-27 22:13:31,434 | INFO     | sum of deviations: 178813391053.0579
[2025-11-27 17:14:38] 2025-11-27 22:13:31,434 | INFO     | mean x: 1764267308.7430408
[2025-11-27 17:14:38] 2025-11-27 22:13:31,434 | INFO     | mean y: 2856170.3254817985
[2025-11-27 17:14:38] 2025-11-27 22:13:31,434 | INFO     | intersect: -9986520915.824
[2025-11-27 17:14:38] 2025-11-27 22:13:31,435 | INFO     | chi2: 9.73177923797875
[2025-11-27 17:14:38] 2025-11-27 22:13:31,435 | INFO     | current chi2=9.73177923797875 (change=28.937498092749664 %)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,435 | INFO     | sum of square deviations: 30577198967.30959
[2025-11-27 17:14:38] 2025-11-27 22:13:31,443 | INFO     | sum of deviations: 22442546648.643044
[2025-11-27 17:14:38] 2025-11-27 22:13:31,443 | INFO     | mean x: 1764267461.2619047
[2025-11-27 17:14:38] 2025-11-27 22:13:31,443 | INFO     | mean y: 2879908.9285714286
[2025-11-27 17:14:38] 2025-11-27 22:13:31,443 | INFO     | intersect: -1292027935.3898177
[2025-11-27 17:14:38] 2025-11-27 22:13:31,443 | INFO     | chi2: 6.828911711357411
[2025-11-27 17:14:38] 2025-11-27 22:13:31,447 | INFO     | current chi2=6.828911711357411 (change=29.82874411384874 %)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,448 | INFO     | sum of square deviations: 29595017376.87524
[2025-11-27 17:14:38] 2025-11-27 22:13:31,450 | INFO     | sum of deviations: -6019315822.039261
[2025-11-27 17:14:38] 2025-11-27 22:13:31,451 | INFO     | mean x: 1764267613.7702408
[2025-11-27 17:14:38] 2025-11-27 22:13:31,451 | INFO     | mean y: 2884323.0853391686
[2025-11-27 17:14:38] 2025-11-27 22:13:31,451 | INFO     | intersect: 361717833.0185552
[2025-11-27 17:14:38] 2025-11-27 22:13:31,451 | INFO     | chi2: 6.762801866087772
[2025-11-27 17:14:38] 2025-11-27 22:13:31,451 | INFO     | current chi2=6.762801866087772 (change=0.9680875674478183 %)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,451 | INFO     | left removable region: 30
[2025-11-27 17:14:38] 2025-11-27 22:13:31,451 | INFO     | sum of square deviations: 23972303966.7324
[2025-11-27 17:14:38] 2025-11-27 22:13:31,454 | INFO     | sum of deviations: 258285043111.33777
[2025-11-27 17:14:38] 2025-11-27 22:13:31,454 | INFO     | mean x: 1764267583.2957747
[2025-11-27 17:14:38] 2025-11-27 22:13:31,454 | INFO     | mean y: 2939922.854460094
[2025-11-27 17:14:38] 2025-11-27 22:13:31,454 | INFO     | intersect: -19005826587.192337
[2025-11-27 17:14:38] 2025-11-27 22:13:31,454 | INFO     | chi2: 0.0343484365146822
[2025-11-27 17:14:38] 2025-11-27 22:13:31,454 | INFO     | current memory leak: 10.77 B/s (using 426 data points, chi2=0.03)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | could have reported an average CPU frequency of 3799 MHz (19 samples)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | ..............................
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | . Timing measurements:
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | . get job = 0 s
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | . initial setup = 5 s
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | . payload setup = 30 s
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | . stage-in = 0 s
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | . payload execution = 28796 s
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | . stage-out = 4 s
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | . log creation = 1 s
[2025-11-27 17:14:38] 2025-11-27 22:13:31,459 | INFO     | ..............................
[2025-11-27 17:14:38] 2025-11-27 22:13:31,768 | INFO     | time since job start (28911s) is within the limit (172800.0s)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,888 | INFO     | 
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | job summary report
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | --------------------------------------------------
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | PanDA job id: 6891579381
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | task id: 47493068
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | errors: (none)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | pilot state: finished 
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | transexitcode: 0
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | exeerrorcode: 0
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | exeerrordiag: 
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | exitcode: 0
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | exitmsg: OK
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | cpuconsumptiontime: 132798 s
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | nevents: 1000
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | neventsw: 0
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | pid: 425157
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | pgrp: 425157
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | corecount: 8
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | event service: False
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | sizes: {0: 2284304, 11: 2284304, 19: 2284594, 22: 2284622, 28830: 2322291, 28836: 2331469, 28867: 2331659}
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | --------------------------------------------------
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | 
[2025-11-27 17:14:38] 2025-11-27 22:13:31,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 17:14:38] 2025-11-27 22:13:31,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,929 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:14:38] 2025-11-27 22:13:31,929 | INFO     | job 6891579381 has completed (purged errors)
[2025-11-27 17:14:38] 2025-11-27 22:13:31,929 | INFO     | overall cleanup function is called
[2025-11-27 17:14:38] 2025-11-27 22:13:32,945 | INFO     | --- collectZombieJob: --- 10, [425157]
[2025-11-27 17:14:38] 2025-11-27 22:13:32,946 | INFO     | zombie collector waiting for pid 425157
[2025-11-27 17:14:38] 2025-11-27 22:13:32,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:14:38] 2025-11-27 22:13:32,946 | INFO     | collected zombie processes
[2025-11-27 17:14:38] 2025-11-27 22:13:32,946 | INFO     | will attempt to kill all subprocesses of pid=425157
[2025-11-27 17:14:38] 2025-11-27 22:13:33,794 | INFO     | process IDs to be killed: [425157] (in reverse order)
[2025-11-27 17:14:38] 2025-11-27 22:13:34,107 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:14:38] 2025-11-27 22:13:34,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:14:38] 2025-11-27 22:13:34,271 | INFO     | did not find any defunct processes belonging to 425157
[2025-11-27 17:14:38] 2025-11-27 22:13:34,360 | INFO     | did not find any defunct processes belonging to 425157
[2025-11-27 17:14:38] 2025-11-27 22:13:34,369 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:14:38] 2025-11-27 22:13:34,370 | INFO     | ready for new job
[2025-11-27 17:14:38] 2025-11-27 22:13:34,370 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:14:38] 2025-11-27 22:13:34,373 | INFO     | ***************************************
[2025-11-27 17:14:38] 2025-11-27 22:13:34,373 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:14:38] 2025-11-27 22:13:34,373 | INFO     | ***************************************
[2025-11-27 17:14:38] 2025-11-27 22:13:34,373 | INFO     | 
[2025-11-27 17:14:38] 2025-11-27 22:13:34,396 | INFO     | architecture information:
[2025-11-27 17:14:38] 2025-11-27 22:13:34,404 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:14:38] 2025-11-27 22:13:34,428 | INFO     | cat /etc/os-release:
[2025-11-27 17:14:38] NAME="CentOS Linux"
[2025-11-27 17:14:38] VERSION="7 (Core)"
[2025-11-27 17:14:38] ID="centos"
[2025-11-27 17:14:38] ID_LIKE="rhel fedora"
[2025-11-27 17:14:38] VERSION_ID="7"
[2025-11-27 17:14:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:14:38] ANSI_COLOR="0;31"
[2025-11-27 17:14:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:14:38] HOME_URL="https://www.centos.org/"
[2025-11-27 17:14:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:14:38] 
[2025-11-27 17:14:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:14:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:14:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:14:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:14:38] 
[2025-11-27 17:14:38] 2025-11-27 22:13:34,428 | INFO     | ***************************************
[2025-11-27 17:14:38] 2025-11-27 22:13:34,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 17:14:38] 2025-11-27 22:13:35,060 | INFO     | sufficient remaining disk space (160820101120 B)
[2025-11-27 17:14:38] 2025-11-27 22:13:35,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:14:38] 2025-11-27 22:13:35,060 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:14:38] 2025-11-27 22:13:35,060 | INFO     | update_server=False
[2025-11-27 17:14:38] 2025-11-27 22:13:35,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:14:38] 2025-11-27 22:13:35,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:14:38] 2025-11-27 22:13:35,237 | INFO     | aborting loop
[2025-11-27 17:14:38] 2025-11-27 22:13:35,751 | INFO     | all payload control threads have been joined
[2025-11-27 17:14:38] 2025-11-27 22:13:36,066 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:36,126 | INFO     | all data control threads have been joined
[2025-11-27 17:14:38] 2025-11-27 22:13:36,219 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:36,254 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:36,255 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:36,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:14:38] 2025-11-27 22:13:36,267 | INFO     | [job] validate thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:36,623 | INFO     | all job control threads have been joined
[2025-11-27 17:14:38] 2025-11-27 22:13:36,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:14:38] 2025-11-27 22:13:36,709 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:36,757 | INFO     | [payload] control thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:36,901 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:37,016 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:37,132 | INFO     | [data] control thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:37,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:37,426 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:37,629 | INFO     | [job] control thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:37,642 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:38,279 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:13:38,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:14:38] 2025-11-27 22:13:42,320 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:14:38] 2025-11-27 22:14:05,930 | INFO     | PID=411586 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 17:14:38] 2025-11-27 22:14:05,930 | INFO     | .. there are 98 such processes running
[2025-11-27 17:14:38] 2025-11-27 22:14:05,930 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:14:38] 2025-11-27 22:14:05,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:14:38] 2025-11-27 22:14:05,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:14:38] 2025-11-27 22:14:31,266 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:14:38] 2025-11-27 22:14:31,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113464506176)>', '<ExcThread(monitor, started 140112813868800)>']
[2025-11-27 17:14:38] 2025-11-27 22:14:32,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:14:38] 2025-11-27 22:14:32,113 | INFO     | [monitor] control thread has ended
[2025-11-27 17:14:38] 2025-11-27 22:14:36,629 | INFO     | all workflow threads have been joined
[2025-11-27 17:14:38] 2025-11-27 22:14:36,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:14:38] 2025-11-27 22:14:36,630 | INFO     | traces error code: 0
[2025-11-27 17:14:38] 2025-11-27 22:14:36,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:14:38] 2025-11-27 22:14:37,017 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:14:38] 2025-11-27 22:14:37,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:14:38] 2025-11-27 22:14:37,032 [wrapper] pilotpid: 411586
[2025-11-27 17:14:38] 2025-11-27 22:14:37,048 [wrapper] Pilot exit status: 0
[2025-11-27 17:14:38] 2025-11-27 22:14:37,186 [wrapper] pandaids: 6891579381
[2025-11-27 17:14:38] 2025-11-27 22:14:37,485 [wrapper] cleanup supervisor_pilot  315980 411587
[2025-11-27 17:14:38] 2025-11-27 22:14:37,528 [wrapper] Test setup, not cleaning
[2025-11-27 17:14:38] 2025-11-27 22:14:37,559 [wrapper] apfmon messages muted
[2025-11-27 17:14:38] 2025-11-27 22:14:37,589 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:14:38] 2025-11-27 22:14:37,655 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:14:38]  *** Error codes and diagnostics ***
[2025-11-27 17:14:38]     "exeErrorCode": 0,
[2025-11-27 17:14:38]     "exeErrorDiag": "",
[2025-11-27 17:14:38]     "pilotErrorCode": 0,
[2025-11-27 17:14:38]     "pilotErrorDiag": "",
[2025-11-27 17:14:38]  *** Listing of results directory ***
[2025-11-27 17:14:38] total 1314860
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 11:45 pilot3.tar.gz
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 11:48 queuedata.json
[2025-11-27 17:14:38] -rwx------. 1 boincer umatlas     36292 Nov 18 11:49 runpilot2-wrapper.sh
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas       100 Nov 27 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:14:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 09:10 run_atlas
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas       105 Nov 27 09:10 job.xml
[2025-11-27 17:14:38] -rw-r--r--. 2 boincer umatlas 410949912 Nov 27 09:11 EVNT.47493065._000389.pool.root.1
[2025-11-27 17:14:38] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 09:11 start_atlas.sh
[2025-11-27 17:14:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 09:11 shared
[2025-11-27 17:14:38] -rw-r--r--. 2 boincer umatlas    590096 Nov 27 09:11 input.tar.gz
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas         0 Nov 27 09:11 boinc_lockfile
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 09:11 pandaJob.out
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas    991588 Nov 27 09:11 agis_schedconf.cvmfs.json
[2025-11-27 17:14:38] drwx------. 5 boincer umatlas      4096 Nov 27 09:11 pilot3
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:00 boinc_task_state.xml
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas      7173 Nov 27 17:09 init_data.xml
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas 921059976 Nov 27 17:12 HITS.47493068._003890.pool.root.1
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas      1053 Nov 27 17:12 memory_monitor_summary.json
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:12 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas   1729999 Nov 27 17:12 log.47493068._003890.job.log.tgz.1
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas        95 Nov 27 17:13 pilot_heartbeat.json
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas      8580 Nov 27 17:13 heartbeat.json
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:14 boinc_mmap_file
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:14 wrapper_checkpoint.txt
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas      4824 Nov 27 17:14 pilotlog.txt
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas   3511358 Nov 27 17:14 log.47493068._003890.job.log.1
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas       353 Nov 27 17:14 output.list
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:14 runtime_log
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas   5263360 Nov 27 17:14 result.tar.gz
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas      8694 Nov 27 17:14 runtime_log.err
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas       658 Nov 27 17:14 LhrMDmd4df8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmauFKDmWstmim.diag
[2025-11-27 17:14:38] -rw-r--r--. 1 boincer umatlas     21133 Nov 27 17:14 stderr.txt
[2025-11-27 17:14:38] HITS file was successfully produced:
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas 921059976 Nov 27 17:12 shared/HITS.pool.root.1
[2025-11-27 17:14:38]  *** Contents of shared directory: ***
[2025-11-27 17:14:38] total 1306540
[2025-11-27 17:14:38] -rw-r--r--. 2 boincer umatlas 410949912 Nov 27 09:11 ATLAS.root_0
[2025-11-27 17:14:38] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 09:11 start_atlas.sh
[2025-11-27 17:14:38] -rw-r--r--. 2 boincer umatlas    590096 Nov 27 09:11 input.tar.gz
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas 921059976 Nov 27 17:12 HITS.pool.root.1
[2025-11-27 17:14:38] -rw-------. 1 boincer umatlas   5263360 Nov 27 17:14 result.tar.gz
17:14:40 (397400): run_atlas exited; CPU time 133291.062967
17:14:40 (397400): called boinc_finish(0)

</stderr_txt>
]]>

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